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Gene ontology
Version 2014-12-22
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Details for CUT metabolic process
Gene ontology ID
GO:0071043
Definition
The chemical reactions and pathways involving cryptic unstable transcripts (CUTs), which are transcribed from intergenic regions. Many intergenic regions are heavily transcribed, but the transcripts are rarely detected due to rapid degradation by the nuclear exosome
References
1. GOC: dgf
2. GOC: krc
3. PMID 15935759
4. PMID 16973436
Legend
is an element of the parent element
is a part of the parent element
is related to the parent element
derives from the parent element
// at least 1 tissue/ enzyme/ localization link in this branch
// tissue/ enzyme/ localization link to BRENDA
Condensed Tree View
Gene ontology
biological_process is a
cellular process is a
cellular metabolic process is a
cellular aromatic compound metabolic process is a
nucleobase-containing compound metabolic process is a
nucleic acid metabolic process is a
RNA metabolic process is a
ncRNA metabolic process is a
CUT metabolic process is a
Tree view
Gene ontology
biological_process is a
behavior is a
biological adhesion is a
biological phase is a
biological regulation is a
biomineralization is a
carbohydrate utilization is a
carbon utilization is a
cellular process is a
actin filament-based process is a
cell activation is a
cell adhesion molecule production is a
cell aggregation is a
cell communication is a
cell cycle is a
cell death is a
cell division is a
cell growth is a
cell killing is a
cell population proliferation is a
cell recognition is a
cell wall organization or biogenesis is a
cell-cell fusion is a
cellular component organization or biogenesis is a
cellular detoxification is a
cellular developmental process is a
cellular localization is a
cellular metabolic process is a
bioluminescence is a
cellular alcohol metabolic process is a
cellular aldehyde metabolic process is a
cellular alkane metabolic process is a
cellular alkene metabolic process is a
cellular alkyne metabolic process is a
cellular aromatic compound metabolic process is a
(+)-kotanin metabolic process is a
2,5-dihydroxypyridine metabolic process is a
3-(3-hydroxy)phenylpropionate metabolic process is a
3-methylquinoline metabolic process is a
5-methylcytosine metabolic process is a
aromatic amino acid family metabolic process is a
aromatic compound biosynthetic process is a
aromatic compound catabolic process is a
aromatic primary alcohol metabolic process is a
benzene-containing compound metabolic process is a
carbazole metabolic process is a
cocaine metabolic process is a
coniferin metabolic process is a
daunorubicin metabolic process is a
demethylkotanin metabolic process is a
dibenzo-p-dioxin metabolic process is a
dibenzofuran metabolic process is a
doxorubicin metabolic process is a
epothilone metabolic process is a
fluorene metabolic process is a
imidazole-containing compound metabolic process is a
indole-containing compound metabolic process is a
isoquinoline alkaloid metabolic process is a
kynurenic acid metabolic process is a
naphthalene-containing compound metabolic process is a
nicotinate metabolic process is a
nucleobase-containing compound metabolic process is a
GDP-alpha-D-mannosylchitobiosyldiphosphodolichol metabolic process is a
nucleic acid metabolic process is a
DNA metabolic process is a
nucleic acid phosphodiester bond hydrolysis is a
RNA metabolic process is a
mitochondrial RNA metabolic process is a
mRNA metabolic process is a
ncRNA metabolic process is a
21U-RNA metabolic process is a
antisense RNA metabolic process is a
CUT metabolic process is a
miRNA metabolic process is a
ncRNA deadenylation is a
ncRNA polyadenylation is a
ncRNA processing is a
piRNA metabolic process is a
rRNA metabolic process is a
snoRNA metabolic process is a
snRNA metabolic process is a
tRNA metabolic process is a
RNA decapping is a
RNA exon ligation is a
RNA modification is a
RNA polyadenylation is a
RNA processing is a
RNA repair is a
RNA secondary structure unwinding is a
tRNA threonylcarbamoyladenosine metabolic process is a
nucleobase-containing small molecule metabolic process is a
polynucleotide dephosphorylation is a
ommochrome metabolic process is a
orlandin metabolic process is a
phenanthrene metabolic process is a
phenol-containing compound metabolic process is a
phenylpropanoid metabolic process is a
picolinic acid metabolic process is a
pteridine-containing compound metabolic process is a
purine-containing compound metabolic process is a
pyridine metabolic process is a
pyridoxamine metabolic process is a
pyridoxine metabolic process is a
s-triazine compound metabolic process is a
sterigmatocystin metabolic process is a
stilbene metabolic process is a
tetrapyrrole metabolic process is a
thiamine diphosphate metabolic process is a
thiamine-containing compound metabolic process is a
thiazole metabolic process is a
verruculogen metabolic process is a
vibriobactin metabolic process is a
cellular biosynthetic process is a
cellular carbohydrate metabolic process is a
cellular catabolic process is a
cellular ketone body metabolic process is a
cellular ketone metabolic process is a
cellular lipid metabolic process is a
cellular macromolecule metabolic process is a
cellular metabolic compound salvage is a
cellular modified amino acid metabolic process is a
cellular nitrogen compound metabolic process is a
cellular organohalogen metabolic process is a
chemosynthesis is a
cofactor metabolic process is a
drug metabolic process is a
generation of precursor metabolites and energy is a
heterocycle metabolic process is a
hydroperoxide metabolic process is a
metabolite repair is a
mucilage metabolic process is a
one-carbon metabolic process is a
organic acid metabolic process is a
organometal metabolic process is a
phosphorus metabolic process is a
photosynthesis is a
prenylation is a
reactive oxygen species metabolic process is a
selenium compound metabolic process is a
sulfur compound metabolic process is a
toxin metabolic process is a
xenobiotic metabolic process is a
cellular pigmentation is a
cellular process involved in reproduction in multicellular organism is a
cellular response to stimulus is a
chromosome segregation is a
cytolysis is a
DNA clamp unloading is a
ensheathment of neurons is a
establishment or maintenance of cell polarity is a
establishment or maintenance of cell type involved in phenotypic switching is a
export from cell is a
intercellular transport is a
intermediate filament-based process is a
light absorption is a
localization of cell is a
membrane docking is a
microtubule organizing center localization is a
microtubule-based process is a
movement of cell or subcellular component is a
multi-organism cellular process is a
phenotypic switching is a
plasmid maintenance is a
process utilizing autophagic mechanism is a
protein folding is a
protein unfolding is a
RNA folding is a
signaling receptor ligand precursor processing is a
stomatal movement is a
syncytium formation is a
transmembrane transport is a
transposition is a
vacuolar transport is a
vesicle-mediated transport is a
detoxification is a
developmental process is a
growth is a
immune system process is a
interspecies interaction between organisms is a
intraspecies interaction between organisms is a
localization is a
locomotion is a
metabolic process is a
multi-organism process is a
multicellular organismal process is a
pigmentation is a
reproduction is a
response to stimulus is a
rhythmic process is a
signaling is a
cellular_component is a
molecular_function is a
binding is a
catalytic activity is a
catalytic activity, acting on a protein is a
catalytic activity, acting on DNA is a
catalytic activity, acting on RNA is a
cyclase activity is a
hydrolase activity is a
isomerase activity is a
ligase activity is a
lyase activity is a
peptidoglycan muralytic activity is a
transferase activity is a
Atg8 ligase activity is a
CDP-alcohol phosphotransferase activity is a
glucanosyltransferase activity is a
Kdo transferase activity is a
mannosylphosphate transferase activity is a
molybdopterin molybdotransferase activity is a
transferase activity, transferring acyl groups is a
transferase activity, transferring aldehyde or ketonic groups is a
transferase activity, transferring alkyl or aryl (other than methyl) groups is a
transferase activity, transferring glycosyl groups is a
transferase activity, transferring nitrogenous groups is a
transferase activity, transferring one-carbon groups is a
carboxyl- or carbamoyltransferase activity is a
hydroxymethyl-, formyl- and related transferase activity is a
methyltransferase activity is a
(R)-reticuline 7-O-methyltransferase activity is a
(S)-reticuline 7-O-methyltransferase activity is a
1-hydroxy-6-methoxypyrene methyltransferase activity is a
1-hydroxypyrene methyltransferase activity is a
1-phenanthrol methyltransferase activity is a
12-demethyl-elloramycin C12a O-methyltransferase activity is a
2,7,4'-trihydroxyisoflavanone-4'-O-methyltransferase activity is a
2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity is a
2-polyprenyl-6-hydroxyphenol methylase activity is a
3',4',5'-trimethylmyricetin 3-O-methyltransferase activity is a
3',4',5'-trimethylmyricetin 7-O-methyltransferase activity is a
3'-O-methyltricetin O methyl transferase activity is a
3,5-dihydroxyanisole O-methyltransferase activity is a
3,5-dimethoxyphenol O-methyltransferase activity is a
3-aminomethylindole N-methyltransferase activity is a
3-methoxy-5-hydroxytoluene O-methyltransferase activity is a
3-methylquercetin 3'-O-methyltransferase activity is a
4,5-dihydroxybenzo(a)pyrene methyltransferase activity is a
4-hydroxytryptamine 4-phosphate methyltransferase activity is a
5,10-methylenetetrahydrofolate-dependent methyltransferase activity is a
5-methyl-5,6,7,8-tetrahydromethanopterin-dependent methyltransferase activity is a
5-methyl-phenazine-1-carboxylate N-methyltransferase activity is a
5-methyltetrahydrofolate-dependent methyltransferase activity is a
5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity is a
5-n-alk(en)ylresorcinol O-methyltransferase activity is a
6a-hydroxymaackiain-3-O-methyltransferase activity is a
7,8,4'-trihydroxyflavone methyltransferase activity is a
7-methylmyricetin 4'-O-methyltransferase activity is a
8-demethylnovobiocic acid C8-methyltransferase activity is a
adrenaline O-methyltransferase activity is a
aminomethyltransferase activity is a
apigenin 7-O-methyltransferase activity is a
bixin methyltransferase activity is a
C-methyltransferase activity is a
C4-demethylase activity is a
C4-methyltransferase activity is a
caffeoylglucose 3-O-methyltransferase activity is a
cirsimaritin 4'-O-methyltransferase activity is a
cobalt-factor II C20-methyltransferase activity is a
cobalt-precorrin-3 C17-methyltransferase activity is a
cobalt-precorrin-5B C1-methyltransferase activity is a
cobalt-precorrin-6B C5-methyltransferase activity is a
cobalt-precorrin-7 C15-methyltransferase activity is a
corydaline synthase activity is a
daphnetin-8-O-methyltransferase activity is a
demethylmenaquinone methyltransferase activity is a
demethylrebeccamycin--D-glucose O-methyltransferase activity is a
dimethyl selenide methyltransferase activity is a
dimethylamine methyltransferase activity is a
dimethylarsinite methyltransferase activity is a
dTDP-3-amino-4-oxo-2,3,6-trideoxy-alpha-D-glucose N,N-dimethyltransferase activity is a
dTDP-3-amino-4-oxo-2,3,6-trideoxy-alpha-D-glucose N-methyltransferase activity is a
dTDP-3-N-methylamino-4-oxo-2,3,6-trideoxy-alpha-D-glucose N-methyltransferase activity is a
eriodictyol 3'-O-methyltransferase activity is a
eriodictyol 4'-O-methyltransferase activity is a
erythromycin C 3''-o-methyltransferase activity is a
erythromycin D 3''-o-methyltransferase activity is a
flavanone 4'-O-methyltransferase activity is a
genkwanin 4'-O-methyltransferase activity is a
gibberellin A20 carboxyl methyltransferase activity is a
gibberellin A34 carboxyl methyltransferase activity is a
gibberellin A4 carboxyl methyltransferase activity is a
gibberellin A9 carboxyl methyltransferase activity is a
gossypetin 8-methyl ester 3'-O-methyltransferase activity is a
hydrogen selenide methyltransferase activity is a
hydroxyneurosporene-O-methyltransferase activity is a
indole acetic acid carboxyl methyltransferase activity is a
indole-3-acetate carboxyl methyltransferase activity is a
isorhamnetin 3-O-methyltransferase activity is a
isoscopoletin-O-methyltransferase activity is a
juvenile hormone acid methyltransferase activity is a
kaempferide 3-O-methyltransferase activity is a
kaempferide 7-O-methyltransferase activity is a
kaempferol 3-O-methyltransferase activity is a
L-dopa O-methyltransferase activity is a
ladanein 6-O-methyltransferase activity is a
laricitrin 4'-O-methyltransferase activity is a
malonyl-CoA methyltransferase activity is a
methaneselenol methyltransferase activity is a
methanol-5-hydroxybenzimidazolylcobamide Co-methyltransferase activity is a
methanol-specific methylcobalamin:coenzyme M methyltransferase activity is a
methyl jasmonate methylesterase activity is a
methylamine-specific methylcobalamin:coenzyme M methyltransferase activity is a
methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity is a
methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase activity is a
methylthiol:coenzyme M methyltransferase activity is a
monomethylamine methyltransferase activity is a
mycinamicin VI 2''-O-methyltransferase activity is a
myricetin 7-O-methyltransferase activity is a
N-methyl-3-aminomethylindole N-methyltransferase activity is a
N-methyltransferase activity is a
naringenin 7-O-methyltransferase activity is a
norbixin methyltransferase activity is a
O-methyltransferase activity is a
orcinol O-methyltransferase activity is a
P-methyltransferase activity is a
paraxanthine:S-adenosyl-L-methionine 3-N-methyltransferase activity is a
patuletin 3'-O-methyltransferase activity is a
phloroglucinol O-methyltransferase activity is a
precorrin-6A synthase (deacetylating) activity is a
protein-(glutamine-N5) methyltransferase activity is a
quercetin 3'-O-methyltransferase activity is a
quercetin 7-O-methyltransferase activity is a
resveratrol 3,5-O-dimethyltransferase activity is a
rhamnetin 3'-O-methyltransferase activity is a
rhamnetin 3-O-methyltransferase activity is a
rhamnetin 4'-O-methyltransferase activity is a
S-adenosyl-L-methionine:(S)-corytuberine-N-methyltransferase activity is a
S-adenosyl-L-methionine:eugenol-O-methyltransferase activity is a
S-adenosylmethionine-dependent methyltransferase activity is a
(RS)-1-benzyl-1,2,3,4-tetrahydroisoquinoline N-methyltransferase activity is a
(RS)-norcoclaurine 6-O-methyltransferase activity is a
(S)-coclaurine-N-methyltransferase activity is a
(S)-scoulerine 9-O-methyltransferase activity is a
(S)-tetrahydroprotoberberine N-methyltransferase activity is a
10-hydroxydihydrosanguinarine 10-O-methyltransferase activity is a
11-O-demethyl-17-O-deacetylvindoline O-methyltransferase activity is a
12-hydroxydihydrochelirubine 12-O-methyltransferase activity is a
16-methoxy-2,3-dihydro-3-hydroxytabersonine N-methyltransferase activity is a
2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity is a
2-methyl-6-solanyl-1,4-benzoquinone methyltransferase activity is a
24-methylenesterol C-methyltransferase activity is a
3'-demethylstaurosporine O-methyltransferase activity is a
3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase activity is a
3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity is a
3,7-dimethylquercitin 4'-O-methyltransferase activity is a
3-hydroxyanthranilate 4-C-methyltransferase activity is a
3-methylquercitin 7-O-methyltransferase activity is a
5-hydroxyfuranocoumarin 5-O-methyltransferase activity is a
6-hydroxymellein O-methyltransferase activity is a
6-O-methylnorlaudanosoline 5'-O-methyltransferase activity is a
8-hydroxyfuranocoumarin 8-O-methyltransferase activity is a
8-hydroxyquercitin 8-O-methyltransferase activity is a
amine N-methyltransferase activity is a
anthranilate N-methyltransferase activity is a
apigenin 4'-O-methyltransferase activity is a
arsenite methyltransferase activity is a
carnosine N-methyltransferase activity is a
chlorophenol O-methyltransferase activity is a
columbamine O-methyltransferase activity is a
cycloartenol 24-C-methyltransferase activity is a
cyclopropane-fatty-acyl-phospholipid synthase activity is a
demethylmacrocin O-methyltransferase activity is a
dimethylhistidine N-methyltransferase activity is a
diphthine synthase activity is a
fatty acid O-methyltransferase activity is a
glucuronoxylan 4-O-methyltransferase activity is a
guanidinoacetate N-methyltransferase activity is a
histidine N-methyltransferase activity is a
indolepyruvate C-methyltransferase activity is a
inositol 1-methyltransferase activity is a
inositol 3-methyltransferase activity is a
inositol 4-methyltransferase activity is a
iodophenol O-methyltransferase activity is a
isobutyraldoxime O-methyltransferase activity is a
isoflavone 4'-O-methyltransferase activity is a
isoorientin 3'-O-methyltransferase activity is a
jasmonate O-methyltransferase activity is a
licodione 2'-O-methyltransferase activity is a
lipid A phosphate methyltransferase activity is a
loganate O-methyltransferase activity is a
luteolin O-methyltransferase activity is a
macrocin O-methyltransferase activity is a
methionine S-methyltransferase activity is a
methylarsonite methyltransferase activity is a
methylene-fatty-acyl-phospholipid synthase activity is a
methylhistidine N-methyltransferase activity is a
methylquercetagetin 6-O-methyltransferase activity is a
N-benzoyl-4-hydroxyanthranilate 4-O-methyltransferase activity is a
O-demethylpuromycin O-methyltransferase activity is a
phenol O-methyltransferase activity is a
polysaccharide O-methyltransferase activity is a
precorrin-2 C20-methyltransferase activity is a
precorrin-3B C17-methyltransferase activity is a
precorrin-4 C11-methyltransferase activity is a
precorrin-6Y C5,15-methyltransferase (decarboxylating) activity is a
putrescine N-methyltransferase activity is a
pyridine N-methyltransferase activity is a
quercetin 3-O-methyltransferase activity is a
S-adenosyl-L-methionine:beta-alanine N-methyltransferase activity is a
S-adenosyl-L-methionine:N,N-dimethyl-beta-alanine N-methyltransferase activity is a
S-adenosyl-L-methionine:N-methyl-beta-alanine N-methyltransferase activity is a
S-adenosylmethionine-homocysteine S-methyltransferase activity is a
tellurite methyltransferase activity is a
tetrahydrocolumbamine 2-O-methyltransferase activity is a
thioether S-methyltransferase activity is a
thiol S-methyltransferase activity is a
thiopurine S-methyltransferase activity is a
trans-aconitate 2-methyltransferase activity is a
trans-aconitate 3-methyltransferase activity is a
tryptophan 2-C-methyltransferase activity is a
tyramine N-methyltransferase activity is a
[cytochrome c]-methionine S-methyltransferase activity is a
[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity is a
S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity is a
S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity is a
S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity is a
S-methyltransferase activity is a
scutellarein 7-methyl ether 4'-O-methyltransferase activity is a
scutellarein 7-methyl ether 6-O-methyltransferase activity is a
Se-methyltransferase activity is a
selenol Se-methyltransferase activity is a
sterol 24C methyltransferase activity is a
syringetin 3-O-methyltransferase activity is a
syringetin 7-O-methyltransferase activity is a
tetracenomycin B3 8-O-methyl transferase activity is a
theobromine:S-adenosyl-L-methionine 1-N-methyltransferase activity is a
thiocyanate methyltransferase activity is a
TRIBOA-glucoside methyltransferase activity is a
tricaffeoyl spermidine O-methyltransferase activity is a
tricetin O-methytransferase activity is a
trimethylamine methyltransferase activity is a
[methyl-Co(III) methanol-specific corrinoid protein]:coenzyme M methyltransferase activity is a
transferase activity, transferring phosphorus-containing groups is a
transferase activity, transferring selenium-containing groups is a
transferase activity, transferring sulfur-containing groups is a
UDP-L-rhamnose synthase activity is a
molecular transducer activity is a
nutrient reservoir activity is a
protein tag is a
small molecule sensor activity is a
structural molecule activity is a
transcription regulator activity is a
transporter activity is a