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Information on Organism Eubacterium limosum

Synonyms:
ATCC 8486; "Bacteroides limosus" Eggerth 1935; Bacteroides limosus; "Butyribacterium limosum" (Eggerth 1935) Moore and Cato 1965; Butyribacterium limosum; "Butyribacterium rettgeri" Barker and Haas 1944; Butyribacterium rettgeri; CCUG 16793; CIP 104169; DSM 20543; Eubacterium limosum (Eggerth 1935) Prevot 1938; Eubacterium limosum; Eubacterium sp. JCM 9976; JCM 6421; JCM 9978; "Mycobacterium limosum" (Eggerth 1935) Krasil'nikov 1949; Mycobacterium limosum;
Word Map for Organism Eubacterium limosum
TaxTree of Organism Eubacterium limosum
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Terrabacteria group can be found in Brenda (clade)
Firmicutes can be found in Brenda BRENDA pathways(phylum)
Clostridia can be found in Brenda BRENDA pathways(class)
Eubacteriales can be found in Brenda BRENDA pathways(order)
Eubacteriaceae can be found in Brenda BRENDA pathways(family)
Eubacterium can be found in Brenda BRENDA pathways(genus)
Eubacterium limosum can be found in Brenda BRENDA pathways(species)
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EC NUMBER
COMMENTARY hide
preliminary BRENDA-supplied EC number
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
1,2-propanediol biosynthesis from lactate (engineered)
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PWY-7541
1,5-anhydrofructose degradation
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PWY-6992
4-aminobutanoate degradation V
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PWY-5022
4-hydroxy-2-nonenal detoxification
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PWY-7112
acetate and ATP formation from acetyl-CoA III
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PWY-8328
acetate conversion to acetyl-CoA
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PWY0-1313
acetate fermentation
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acetone degradation I (to methylglyoxal)
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PWY-5451
acetone degradation III (to propane-1,2-diol)
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PWY-7466
acetyl-CoA fermentation to butanoate
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PWY-5676
acrylonitrile degradation I
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PWY-7308
adenosine ribonucleotides de novo biosynthesis
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PWY-7219
adlupulone and adhumulone biosynthesis
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PWY-7857
alanine metabolism
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Alanine, aspartate and glutamate metabolism
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Amaryllidacea alkaloids biosynthesis
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PWY-7826
Aminobenzoate degradation
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Arachidonic acid metabolism
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arachidonic acid metabolism
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Arginine and proline metabolism
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Arginine biosynthesis
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arginine metabolism
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Atrazine degradation
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bacterial bioluminescence
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PWY-7723
beta-Alanine metabolism
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Bifidobacterium shunt
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P124-PWY
Biosynthesis of secondary metabolites
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brassinolide biosynthesis I
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PWY-699
brassinolide biosynthesis II
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PWY-2582
bupropion degradation
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PWY66-241
Butanoate metabolism
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Caffeine metabolism
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camalexin biosynthesis
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CAMALEXIN-SYN
Carbon fixation pathways in prokaryotes
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carbon tetrachloride degradation II
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PWY-5372
chitin deacetylation
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PWY-7118
cis-geranyl-CoA degradation
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PWY-6672
Citrate cycle (TCA cycle)
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citric acid cycle
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CO2 fixation in Crenarchaeota
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colupulone and cohumulone biosynthesis
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PWY-5133
Cyanoamino acid metabolism
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Cysteine and methionine metabolism
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degradation of aromatic, nitrogen containing compounds
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Drug metabolism - cytochrome P450
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Drug metabolism - other enzymes
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ethanol degradation II
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PWY66-21
ethanol degradation III
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PWY66-161
ethanol degradation IV
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PWY66-162
Fatty acid degradation
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folate polyglutamylation
folate transformations I
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PWY-2201
folate transformations II (plants)
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PWY-3841
formaldehyde oxidation
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formaldehyde oxidation II (glutathione-dependent)
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PWY-1801
formate assimilation into 5,10-methylenetetrahydrofolate
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PWY-1722
formate oxidation to CO2
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PWY-1881
GABA shunt I
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GLUDEG-I-PWY
GABA shunt II
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PWY-8346
gallate degradation III (anaerobic)
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P3-PWY
gamma-glutamyl cycle
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PWY-4041
gliotoxin biosynthesis
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PWY-7533
glucosinolate biosynthesis from dihomomethionine
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PWYQT-4471
glucosinolate biosynthesis from hexahomomethionine
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PWYQT-4475
glucosinolate biosynthesis from homomethionine
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PWY-1187
glucosinolate biosynthesis from pentahomomethionine
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PWYQT-4474
glucosinolate biosynthesis from phenylalanine
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PWY-2821
glucosinolate biosynthesis from tetrahomomethionine
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PWYQT-4473
glucosinolate biosynthesis from trihomomethionine
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PWYQT-4472
glucosinolate biosynthesis from tryptophan
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PWY-601
glucosinolate biosynthesis from tyrosine
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PWY-7901
glutamate and glutamine metabolism
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Glutathione metabolism
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glutathione metabolism
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glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
Glycerolipid metabolism
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Glycolysis / Gluconeogenesis
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Glyoxylate and dicarboxylate metabolism
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heterolactic fermentation
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P122-PWY
homocysteine and cysteine interconversion
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PWY-801
hydrogen production VI
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PWY-6780
hypoglycin biosynthesis
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PWY-5826
IAA biosynthesis
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incomplete reductive TCA cycle
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P42-PWY
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
indole-3-acetate biosynthesis II
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PWY-581
indole-3-acetate biosynthesis III (bacteria)
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PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
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PWY-5025
isopropanol biosynthesis (engineered)
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PWY-6876
ketogenesis
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PWY66-367
L-alanine degradation II (to D-lactate)
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ALACAT2-PWY
L-alanine degradation VI (reductive Stickland reaction)
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PWY-8188
L-arginine degradation X (arginine monooxygenase pathway)
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ARGDEG-V-PWY
L-carnitine degradation IV
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PWY-8307
L-glutamate degradation IX (via 4-aminobutanoate)
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PWY0-1305
L-glutamate degradation V (via hydroxyglutarate)
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P162-PWY
L-glutamate degradation XI (reductive Stickland reaction)
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PWY-8190
L-histidine degradation V
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PWY-5031
L-isoleucine biosynthesis V
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PWY-5108
L-lactaldehyde degradation
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-
L-methionine biosynthesis I
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HOMOSER-METSYN-PWY
lactate fermentation
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leukotriene biosynthesis
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PWY66-375
Linoleic acid metabolism
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lipid metabolism
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-
lupulone and humulone biosynthesis
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-
PWY-5132
melatonin degradation I
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PWY-6398
Metabolic pathways
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Metabolism of xenobiotics by cytochrome P450
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Methane metabolism
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methanogenesis from acetate
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METH-ACETATE-PWY
methanogenesis from methanol
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CO2FORM-PWY
methanogenesis from trimethylamine
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PWY-5250
methanol oxidation to formaldehyde IV
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PWY-5506
methionine metabolism
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Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
nicotine degradation IV
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PWY66-201
nicotine degradation V
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PWY66-221
Nitrotoluene degradation
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-
non-pathway related
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-
One carbon pool by folate
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oxalate degradation III
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PWY-6696
oxalate degradation VI
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PWY-7985
pentachlorophenol degradation
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PCPDEG-PWY
peptido-conjugates in tissue regeneration biosynthesis
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PWY-8355
Phenylalanine metabolism
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propanoate fermentation to 2-methylbutanoate
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PWY-5109
Propanoate metabolism
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propanol degradation
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protein S-nitrosylation and denitrosylation
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PWY-7798
Purine metabolism
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purine metabolism
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purine nucleobases degradation I (anaerobic)
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P164-PWY
purine nucleobases degradation II (anaerobic)
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PWY-5497
pyruvate fermentation to (R)-lactate
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PWY-8274
pyruvate fermentation to (S)-lactate
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PWY-5481
pyruvate fermentation to acetone
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PWY-6588
pyruvate fermentation to propanoate II (acrylate pathway)
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PWY-5494
Pyruvate metabolism
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reactive oxygen species degradation
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DETOX1-PWY-1
reductive acetyl coenzyme A pathway
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reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
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CODH-PWY
reductive glycine pathway of autotrophic CO2 fixation
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PWY-8303
reductive TCA cycle I
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P23-PWY
reductive TCA cycle II
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PWY-5392
retinol biosynthesis
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PWY-6857
Retinol metabolism
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S-(6-hydroxy-4-methylhexan-4-yl)-L-cysteinylglycine degradation
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PWY-8302
seleno-amino acid biosynthesis (plants)
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PWY-6936
Selenocompound metabolism
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Steroid hormone biosynthesis
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Styrene degradation
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succinate fermentation to butanoate
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PWY-5677
superoxide radicals degradation
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DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
superpathway of glucose and xylose degradation
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PWY-6901
Taurine and hypotaurine metabolism
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TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VI (Helicobacter)
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REDCITCYC
TCA cycle VII (acetate-producers)
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PWY-7254
testosterone and androsterone degradation to androstendione (aerobic)
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PWY-6943
Thiamine metabolism
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triacylglycerol degradation
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LIPAS-PWY
Tryptophan metabolism
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tryptophan metabolism
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urea cycle
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urea degradation II
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PWY-5704
vancomycin resistance I
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PWY-6454
vanillin biosynthesis I
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PWY-5665
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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LINKS TO OTHER DATABASES (specific for Eubacterium limosum)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA