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EC 3.1.4.60 Details
EC number
3.1.4.60
Accepted name
pApA phosphodiesterase
Reaction
5′-O-phosphonoadenylyl-(3′→5′)-adenosine + H2O = 2 AMP
Other name(s)
pde2 (gene name), pApA hydrolase
Systematic name
5′-O-phosphonoadenylyl-(3′→5′)-adenosine phosphohydrolase
Comment
The enzyme, characterized from the Gram-positive bacterium Staphylococcus aureus, is a cytoplasmic protein that contains a DHH/DHHA1 domain. It can act on cyclic di-3′,5′-adenylate with a much lower activity (cf. EC 3.1.4.59, cyclic-di-AMP phosphodiesterase). Activity requires Mn2+ and is inhibited by ppGpp.
History
created 2019
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EC Tree
1 Oxidoreductases
2 Transferases
3 Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.1 carboxylesterase
3.1.1.2 arylesterase
3.1.1.3 triacylglycerol lipase
3.1.1.4 phospholipase A2
3.1.1.5 lysophospholipase
3.1.1.6 acetylesterase
3.1.1.7 acetylcholinesterase
3.1.1.8 cholinesterase
3.1.1.9 created 1961, deleted 1972
3.1.1.10 tropinesterase
3.1.1.11 pectinesterase
3.1.1.12 created 1961, deleted 1972
3.1.1.13 sterol esterase
3.1.1.14 chlorophyllase
3.1.1.15 L-arabinonolactonase
3.1.1.16 created 1961, deleted 1972
3.1.1.17 gluconolactonase
3.1.1.18 created 1961, deleted 1982
3.1.1.19 uronolactonase
3.1.1.20 tannase
3.1.1.21 retinyl-palmitate esterase
3.1.1.22 hydroxybutyrate-dimer hydrolase
3.1.1.23 acylglycerol lipase
3.1.1.24 3-oxoadipate enol-lactonase
3.1.1.25 1,4-lactonase
3.1.1.26 galactolipase
3.1.1.27 4-pyridoxolactonase
3.1.1.28 acylcarnitine hydrolase
3.1.1.29 aminoacyl-tRNA hydrolase
3.1.1.30 D-arabinonolactonase
3.1.1.31 6-phosphogluconolactonase
3.1.1.32 phospholipase A1
3.1.1.33 6-acetylglucose deacetylase
3.1.1.34 lipoprotein lipase
3.1.1.35 dihydrocoumarin hydrolase
3.1.1.36 limonin-D-ring-lactonase
3.1.1.37 steroid-lactonase
3.1.1.38 triacetate-lactonase
3.1.1.39 actinomycin lactonase
3.1.1.40 orsellinate-depside hydrolase
3.1.1.41 cephalosporin-C deacetylase
3.1.1.42 chlorogenate hydrolase
3.1.1.43 α-amino-acid esterase
3.1.1.44 4-methyloxaloacetate esterase
3.1.1.45 carboxymethylenebutenolidase
3.1.1.46 deoxylimonate A-ring-lactonase
3.1.1.47 1-alkyl-2-acetylglycerophosphocholine esterase
3.1.1.48 fusarinine-C ornithinesterase
3.1.1.49 sinapine esterase
3.1.1.50 wax-ester hydrolase
3.1.1.51 phorbol-diester hydrolase
3.1.1.52 phosphatidylinositol deacylase
3.1.1.53 sialate O-acetylesterase
3.1.1.54 acetoxybutynylbithiophene deacetylase
3.1.1.55 acetylsalicylate deacetylase
3.1.1.56 methylumbelliferyl-acetate deacetylase
3.1.1.57 2-pyrone-4,6-dicarboxylate lactonase
3.1.1.58 N-acetylgalactosaminoglycan deacetylase
3.1.1.59 juvenile-hormone esterase
3.1.1.60 bis(2-ethylhexyl)phthalate esterase
3.1.1.61 protein-glutamate methylesterase
3.1.1.62 created 1989, deleted 1992
3.1.1.63 11-cis-retinyl-palmitate hydrolase
3.1.1.64 retinoid isomerohydrolase
3.1.1.65 L-rhamnono-1,4-lactonase
3.1.1.66 5-(3,4-diacetoxybut-1-ynyl)-2,2′-bithiophene deacetylase
3.1.1.67 fatty-acyl-ethyl-ester synthase
3.1.1.68 xylono-1,4-lactonase
3.1.1.69 created 1992, deleted 2002
3.1.1.70 cetraxate benzylesterase
3.1.1.71 acetylalkylglycerol acetylhydrolase
3.1.1.72 acetylxylan esterase
3.1.1.73 feruloyl esterase
3.1.1.74 cutinase
3.1.1.75 poly(3-hydroxybutyrate) depolymerase
3.1.1.76 poly(3-hydroxyoctanoate) depolymerase
3.1.1.77 acyloxyacyl hydrolase
3.1.1.78 polyneuridine-aldehyde esterase
3.1.1.79 hormone-sensitive lipase
3.1.1.80 acetylajmaline esterase
3.1.1.81 quorum-quenching N-acyl-homoserine lactonase
3.1.1.82 pheophorbidase
3.1.1.83 monoterpene ε-lactone hydrolase
3.1.1.84 cocaine esterase
3.1.1.85 pimelyl-[acyl-carrier protein] methyl ester esterase
3.1.1.86 rhamnogalacturonan acetylesterase
3.1.1.87 fumonisin B1 esterase
3.1.1.88 pyrethroid hydrolase
3.1.1.89 protein phosphatase methylesterase-1
3.1.1.90 all-trans-retinyl ester 13-cis isomerohydrolase
3.1.1.91 2-oxo-3-(5-oxofuran-2-ylidene)propanoate lactonase
3.1.1.92 4-sulfomuconolactone hydrolase
3.1.1.93 mycophenolic acid acyl-glucuronide esterase
3.1.1.94 versiconal hemiacetal acetate esterase
3.1.1.95 aclacinomycin methylesterase
3.1.1.96 D-aminoacyl-tRNA deacylase
3.1.1.97 methylated diphthine methylhydrolase
3.1.1.98 [Wnt protein] O-palmitoleoyl-L-serine hydrolase
3.1.1.99 6-deoxy-6-sulfogluconolactonase
3.1.1.100 chlorophyllide a hydrolase
3.1.1.101 poly(ethylene terephthalate) hydrolase
3.1.1.102 mono(ethylene terephthalate) hydrolase
3.1.1.103 teichoic acid D-alanine hydrolase
3.1.1.104 5-phospho-D-xylono-1,4-lactonase
3.1.1.105 3-O-acetylpapaveroxine carboxylesterase
3.1.1.106 O-acetyl-ADP-ribose deacetylase
3.1.1.107 apo-salmochelin esterase
3.1.1.108 iron(III)-enterobactin esterase
3.1.1.109 iron(III)-salmochelin esterase
3.1.1.110 xylono-1,5-lactonase
3.1.1.111 phosphatidylserine sn-1 acylhydrolase
3.1.1.112 isoamyl acetate esterase
3.1.1.113 ethyl acetate hydrolase
3.1.1.114 methyl acetate hydrolase
3.1.1.115 D-apionolactonase
3.1.1.116 sn-1-specific diacylglycerol lipase
3.1.1.117 (4-O-methyl)-D-glucuronate—lignin esterase
3.1.1.118 phospholipid sn-1 acylhydrolase
3.1.1.119 exo-acting protein-α-N-acetylgalactosaminidase
3.1.2 Thioester hydrolases
3.1.3 Phosphoric-monoester hydrolases
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
3.1.4.2 glycerophosphocholine phosphodiesterase
3.1.4.3 phospholipase C
3.1.4.4 phospholipase D
3.1.4.5 created 1961, deleted 1978
3.1.4.6 created 1961, deleted 1978
3.1.4.7 created 1961, deleted 1978
3.1.4.8 created 1961, transferred 1965 to EC 2.7.7.26, reinstated 1972, deleted 1978
3.1.4.9 created 1965, deleted 1978
3.1.4.10 created 1972, modified 1976, deleted 2002
3.1.4.11 phosphoinositide phospholipase C
3.1.4.12 sphingomyelin phosphodiesterase
3.1.4.13 serine-ethanolaminephosphate phosphodiesterase
3.1.4.14 [acyl-carrier-protein] phosphodiesterase
3.1.4.15 adenylyl-[glutamate—ammonia ligase] hydrolase
3.1.4.16 2′,3′-cyclic-nucleotide 2′-phosphodiesterase
3.1.4.17 3′,5′-cyclic-nucleotide phosphodiesterase
3.1.4.18 created 1972, deleted 1978
3.1.4.19 created 1972, deleted 1978
3.1.4.20 created 1972, deleted 1978
3.1.4.21 created 1972, deleted 1978
3.1.4.22 created 1972, deleted 1978
3.1.4.23 created 1972, deleted 1978
3.1.4.24 created 1972, deleted 1978
3.1.4.25 created 1972, deleted 1978
3.1.4.26 created 1972, deleted 1978
3.1.4.27 created 1972, deleted 1978
3.1.4.28 created 1972, deleted 1978
3.1.4.29 created 1972, deleted 1978
3.1.4.30 created 1972, deleted 1978
3.1.4.31 created 1972, deleted 1978
3.1.4.32 created 1972, deleted 1978
3.1.4.33 created 1972, deleted 1978
3.1.4.34 created 1972, deleted 1978
3.1.4.35 3′,5′-cyclic-GMP phosphodiesterase
3.1.4.36 created 1976, deleted 2002
3.1.4.37 2′,3′-cyclic-nucleotide 3′-phosphodiesterase
3.1.4.38 glycerophosphocholine cholinephosphodiesterase
3.1.4.39 alkylglycerophosphoethanolamine phosphodiesterase
3.1.4.40 CMP-N-acylneuraminate phosphodiesterase
3.1.4.41 sphingomyelin phosphodiesterase D
3.1.4.42 glycerol-1,2-cyclic-phosphate 2-phosphodiesterase
3.1.4.43 glycerophosphoinositol inositolphosphodiesterase
3.1.4.44 glycerophosphoinositol glycerophosphodiesterase
3.1.4.45 N-acetylglucosamine-1-phosphodiester α-N-acetylglucosaminidase
3.1.4.46 glycerophosphodiester phosphodiesterase
3.1.4.47 created 1989, deleted 2002
3.1.4.48 dolichylphosphate-glucose phosphodiesterase
3.1.4.49 dolichylphosphate-mannose phosphodiesterase
3.1.4.50 glycosylphosphatidylinositol phospholipase D
3.1.4.51 glucose-1-phospho-D-mannosylglycoprotein phosphodiesterase
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
3.1.4.53 3′,5′-cyclic-AMP phosphodiesterase
3.1.4.54 N-acetylphosphatidylethanolamine-hydrolysing phospholipase D
3.1.4.55 phosphoribosyl 1,2-cyclic phosphate phosphodiesterase
3.1.4.56 7,8-dihydroneopterin 2′,3′-cyclic phosphate phosphodiesterase
3.1.4.57 phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase
3.1.4.58 RNA 2′,3′-cyclic 3′-phosphodiesterase
3.1.4.59 cyclic-di-AMP phosphodiesterase
3.1.4.60 pApA phosphodiesterase
3.1.4.61 cyclic 2,3-diphosphoglycerate hydrolase
3.1.5 Triphosphoric-monoester hydrolases
3.1.6 Sulfuric-ester hydrolases
3.1.7 Diphosphoric-monoester hydrolases
3.1.8 Phosphoric-triester hydrolases
3.1.11 Exodeoxyribonucleases producing 5′-phosphomonoesters
3.1.12 Exodeoxyribonucleases producing 3′-phosphomonoesters
3.1.13 Exoribonucleases producing 5′-phosphomonoesters
3.1.14 Exoribonucleases producing 3'-phosphomonoesters
3.1.15 Exonucleases that are active with either ribo- or deoxyribonucleic acids and produce 5'-phosphomonoesters
3.1.16 Exonucleases that are active with either ribo- or deoxyribonucleic acids and produce 3'-phosphomonoesters
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.22 Endodeoxyribonucleases producing 3'-phosphomonoesters
3.1.23 Site-specific endodeoxyribonucleases: cleavage is sequence specific (deleted sub-subclass)
3.1.24 Site specific endodeoxyribonucleases: cleavage is not sequence specific (deleted sub-subclass)
3.1.25 Site-specific endodeoxyribonucleases that are specific for altered bases
3.1.25.1 deoxyribonuclease (pyrimidine dimer)
3.1.25.2 created 1978, deleted 1992
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.27 Endoribonucleases producing 3'-phosphomonoesters
3.1.30 Endoribonucleases that are active with either ribo- or deoxyribonucleic acids and produce 5'-phosphomonoesters
3.1.31 Endoribonucleases that are active with either ribo- or deoxyribonucleic acids and produce 3'-phosphomonoesters
3.2 Glycosylases
3.3 Acting on ether bonds
3.4 Acting on peptide bonds (peptidases)
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.6 Acting on acid anhydrides
3.7 Acting on carbon-carbon bonds
3.8 Acting on halide bonds
3.9 Acting on phosphorus-nitrogen bonds
3.10 Acting on sulfur-nitrogen bonds
3.11 Acting on carbon-phosphorus bonds
3.12 Acting on sulfur-sulfur bonds
3.13 Acting on carbon-sulfur bonds
4 Lyases
5 Isomerases
6 Ligases
7 Translocases