Sequence of YESX_BACSU
EC Number:4.2.2.24
EC Number
Recommended Name
Accession Code
Organism
No of amino acids
Molecular Weight [Da]
Source
Reaction
Exotype eliminative cleavage of alpha-L-rhamnopyranosyl-(1->4)-alpha-D-galactopyranosyluronic acid bonds of rhamnogalacturonan I oligosacharides containing alpha-L-rhamnopyranose at the reducing end and 4-deoxy-4,5-unsaturated D-galactopyranosyluronic acid at the non-reducing end. The products are the disaccharide 2-O-(4-deoxy-beta-L-threo-hex-4-enopyranuronosyl)-alpha-L-rhamnopyranose and the shortened rhamnogalacturonan oligosaccharide containing one 4-deoxy-4,5-unsaturated D-galactopyranosyluronic acid at the non-reducing end.
Other sequences found for EC No. 4.2.2.24
General information:
Sequence
0 MKPKKRQMEY LTRGLIAVQT EQGVFVSWRF LGTDHETTAF HLYRDGKRIT RDPIAESTNF
60 LDQNGTADSV YQVAAVNKGR EEKLSKKARV WQENVLEVPL AKPEGGVTPD GKPYTYSAND
120 ASVGDIDGDG EYEMILKWDP SNSKDNAHDG YTGEVLIDAY KLDGTFLWRI NLGRNIRAGA
180 HYTQFMVYDL DGDGKAEIAM KTADGTTDGK GHIIGDEQAD FRNEQGRILS GPEYLTVFKG
240 ETGEALTTVE YEPPRGKLED WGDGYGNRMD RFLAGTAYLD GERPSLVMAR GYYTRTVLVA
300 YDFRNGRLKK RWVFDSNQPG HEAYAGQGNH SLSVADVDGD GKDEIIYGAM AVDHDGTGLY
360 STGLGHGDAM HVGDLDPSRK GLEVFQVHED ATKPYGLSLR DAGTGEILWG VHAGTDVGRG
420 MAAHIDPSYK GSLVWGIDPP GNDGMSYGLF TSKGEKISDK APSSANFAIW WDGDLVRELL
480 DHDWDGTIGR PKIEKWDAEN GCLKTIFQPA GVLSNNGTKG NPVLQANLFG DWREEVIWRT
540 EDSSALRIYT TTHLTRHCFY TLMHDPVYRL GIAWQNTAYN QPPHTSFYLG TGMKKPPKPA
600 LYIAGSKAEA PL
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Sequence Reference
Authors
Title
Journal
Volume
Pages
Year
PubMed ID
633645
Kunst F.,Ogasawara N.,Moszer I.,Albertini A.M.,Alloni G.,Azevedo V.,Bertero M.G.,Bessieres P.,Bolotin A.,Borchert S.,Borriss R.,Boursier L.,Brans A.,Braun M.,Brignell S.C.,Bron S.,Brouillet S.,Bruschi C.V.,Caldwell B.,Capuano V.,Carter N.M.,Choi S.-K.,Codani J.-J.,Connerton I.F.,Cummings N.J.,Daniel R.A.,Denizot F.,Devine K.M.,Duesterhoeft A.,Ehrlich S.D.,Emmerson P.T.,Entian K.-D.,Errington J.,Fabret C.,Ferrari E.,Foulger D.,Fritz C.,Fujita M.,Fujita Y.,Fuma S.,Galizzi A.,Galleron N.,Ghim S.-Y.,Glaser P.,Goffeau A.,Golightly E.J.,Grandi G.,Guiseppi G.,Guy B.J.,Haga K.,Haiech J.,Harwood C.R.,Henaut A.,Hilbert H.,Holsappel S.,Hosono S.,Hullo M.-F.,Itaya M.,Jones L.-M.,Joris B.,Karamata D.,Kasahara Y.,Klaerr-Blanchard M.,Klein C.,Kobayashi Y.,Koetter P.,Koningstein G.,Krogh S.,Kumano M.,Kurita K.,Lapidus A.,Lardinois S.,Lauber J.,Lazarevic V.,Lee S.-M.,Levine A.,Liu H.,Masuda S.,Mauel C.,Medigue C.,Medina N.,Mellado R.P.,Mizuno M.,Moestl D.,Nakai S.,Noback M.,Noone D.,O'Reilly M.,Ogawa K.,Ogiwara A.,Oudega B.,Park S.-H.,Parro V.,Pohl T.M.,Portetelle D.,Porwollik S.,Prescott A.M.,Presecan E.,Pujic P.,Purnelle B.,Rapoport G.,Rey M.,Reynolds S.,Rieger M.,Rivolta C.,Rocha E.,Roche B.,Rose M.,Sadaie Y.,Sato T.,Scanlan E.,Schleich S.,Schroeter R.,Scoffone F.,Sekiguchi J.,Sekowska A.,Seror S.J.,Serror P.,Shin B.-S.,Soldo B.,Sorokin A.,Tacconi E.,Takagi T.,Takahashi H.,Takemaru K.,Takeuchi M.,Tamakoshi A.,Tanaka T.,Terpstra P.,Tognoni A.,Tosato V.,Uchiyama S.,Vandenbol M.,Vannier F.,Vassarotti A.,Viari A.,Wambutt R.,Wedler E.,Wedler H.,Weitzenegger T.,Winters P.,Wipat A.,Yamamoto H.,Yamane K.,Yasumoto K.,Yata K.,Yoshida K.,Yoshikawa H.-F.,Zumstein E.,Yoshikawa H.,Danchin A.
The complete genome sequence of the Gram-positive bacterium Bacillus subtilis.
Nature
390
249-256
1997
633646
Ochiai A.,Itoh T.,Kawamata A.,Hashimoto W.,Murata K.
Plant cell wall degradation by saprophytic Bacillus subtilis strains: gene clusters responsible for rhamnogalacturonan depolymerization.
Appl. Environ. Microbiol.
73
3803-3813
2007
633647
Ochiai A.,Itoh T.,Mikami B.,Hashimoto W.,Murata K.
Structural determinants responsible for substrate recognition and mode of action in family 11 polysaccharide lyases.
J. Biol. Chem.
284
10181-10189
2009
