3.4.99.1	acrocylindricum proteinase	transferred to EC 3.4.23.28	
3.4.99.2	agavain	deleted	
3.4.99.3	angiotensinase	deleted	
3.4.99.32	Armillaria mellea neutral proteinase	transferred to EC 3.4.24.20	
3.4.99.4	aspartylendopeptidase	transferred to EC 3.4.23.12	
3.4.99.13	beta-lytic proteinase (Mycobacterium sorangium)	transferred to EC 3.4.24.32	
3.4.99.33	cathepsin R	deleted	
3.4.99.5	Clostridium histolyticum collagenase 2	transferred to EC 3.4.24.3	
3.4.99.6	crayfish low-molecular-weight proteinase	transferred to EC 3.4.24.21	
3.4.99.B2	D-aspartyl endopeptidase	preliminary BRENDA-supplied EC number