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Organism related
Word Map for Organism Phaffia rhodozyma
- Phaffia rhodozyma
- astaxanthin
- pluvialis
- beta-carotene
- crtyb
-
carotenogenic
- phytoene
- carotene
- lycopene
-
astaxanthin-producing
-
carotenogenesis
- mevalonate
- haematococcus
- canthaxanthin
-
heterobasidiomycetous
- cystofilobasidiales
-
geranylgeranyl
TaxTree of Organism Phaffia rhodozyma
Condensed Tree View
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EC NUMBER 
COMMENTARY 
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(3R)-linalool biosynthesis
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PWY-7709
(3S)-linalool biosynthesis
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PWY-7141
(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)
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PWY-7216
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
(S)-propane-1,2-diol degradation
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PWY-7013
1,5-anhydrofructose degradation
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PWY-6992
2-deoxy-D-ribose degradation II
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PWY-8058
2-methylpropene degradation
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PWY-7778
24-epi-campesterol, fucosterol, and clionasterol biosynthesis (diatoms)
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PWY-8238
3-hydroxypropanoate/4-hydroxybutanate cycle
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PWY-5789
3-methylbutanol biosynthesis (engineered)
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PWY-6871
4-aminobutanoate degradation V
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PWY-5022
4-oxopentanoate degradation
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PWY-7948
acetaldehyde biosynthesis I
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PWY-6333
acetoacetate degradation (to acetyl CoA)
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ACETOACETATE-DEG-PWY
acetone degradation I (to methylglyoxal)
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PWY-5451
acetone degradation III (to propane-1,2-diol)
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PWY-7466
acetyl-CoA biosynthesis from citrate
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PWY-5172
acetyl-CoA fermentation to butanoate
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PWY-5676
acetylene degradation (anaerobic)
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P161-PWY
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
all-trans-farnesol biosynthesis
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PWY-6859
alpha-carotene biosynthesis
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PWY-5946
alpha-tomatine degradation
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PWY18C3-5
Amaryllidacea alkaloids biosynthesis
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PWY-7826
ammonia oxidation II (anaerobic)
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P303-PWY
anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
anaerobic energy metabolism (invertebrates, mitochondrial)
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PWY-7384
apratoxin A biosynthesis
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PWY-8361
arachidonate metabolites biosynthesis
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PWY-8397
astaxanthin biosynthesis (bacteria, fungi, algae)
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PWY-5288
beta-carotene biosynthesis
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PWY-5943
Bifidobacterium shunt
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P124-PWY
bisabolene biosynthesis (engineered)
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PWY-7102
brassicicene C biosynthesis
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PWY-7517
bupropion degradation
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PWY66-241
butanol and isobutanol biosynthesis (engineered)
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PWY-7396
C20 prostanoid biosynthesis
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PWY66-374
C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
cellulose degradation II (fungi)
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PWY-6788
chitin deacetylation
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PWY-7118
chitin degradation I (archaea)
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PWY-6855
chitin degradation II (Vibrio)
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PWY-6902
chitin degradation III (Serratia)
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PWY-7822
chlorobactene biosynthesis
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PWY-7939
cholesterol biosynthesis (algae, late side-chain reductase)
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PWY-8191
cholesterol biosynthesis (diatoms)
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PWY-8239
cholesterol biosynthesis (plants, early side-chain reductase)
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PWY18C3-1
cholesterol biosynthesis II (via 24,25-dihydrolanosterol)
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PWY66-3
coumarin biosynthesis (via 2-coumarate)
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PWY-5176
crotonate fermentation (to acetate and cyclohexane carboxylate)
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PWY-7401
curacin A biosynthesis
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PWY-8358
di-homo-gamma-linolenate metabolites biosynthesis
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PWY-8396
docosahexaenoate metabolites biosynthesis
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PWY-8400
ergosterol biosynthesis I
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PWY-6075
ergosterol biosynthesis II
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PWY-7154
ethanol degradation I
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ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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PWY66-21
ethanol degradation IV
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PWY66-162
ethanolamine utilization
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PWY0-1477
ethene biosynthesis III (microbes)
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PWY-6854
ethene biosynthesis IV (engineered)
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PWY-7126
ethylmalonyl-CoA pathway
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PWY-5741
Fe(II) oxidation
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PWY-6692
ferrichrome A biosynthesis
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PWY-7571
firefly bioluminescence
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PWY-7913
flexixanthin biosynthesis
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PWY-7947
formaldehyde assimilation I (serine pathway)
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PWY-1622
formate to nitrite electron transfer
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PWY0-1585
fusicoccin A biosynthesis
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PWY-6659
geranyl diphosphate biosynthesis
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PWY-5122
geranylgeranyl diphosphate biosynthesis
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PWY-5120
gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis III
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PWY66-399
glutaryl-CoA degradation
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PWY-5177
glutathione-peroxide redox reactions
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PWY-4081
glycerol degradation I
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PWY-4261
glycerol-3-phosphate shuttle
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PWY-6118
glycerol-3-phosphate to cytochrome bo oxidase electron transfer
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PWY0-1561
glycerol-3-phosphate to fumarate electron transfer
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PWY0-1582
glycerol-3-phosphate to hydrogen peroxide electron transport
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PWY0-1591
glycerophosphodiester degradation
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PWY-6952
glycogen degradation I
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GLYCOCAT-PWY
glycogen degradation II
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PWY-5941
glyoxylate cycle
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GLYOXYLATE-BYPASS
heterolactic fermentation
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P122-PWY
homocysteine and cysteine interconversion
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PWY-801
hydrogen sulfide biosynthesis II (mammalian)
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PWY66-426
icosapentaenoate metabolites biosynthesis
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PWY-8399
incomplete reductive TCA cycle
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P42-PWY
inulin degradation
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PWY-8314
ipsdienol biosynthesis
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PWY-7410
isoprene biosynthesis II (engineered)
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PWY-7391
isopropanol biosynthesis (engineered)
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PWY-6876
isorenieratene biosynthesis I (actinobacteria)
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PWY-7938
ketogenesis
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PWY66-367
ketolysis
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PWY66-368
L-alanine degradation II (to D-lactate)
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ALACAT2-PWY
L-alanine degradation VI (reductive Stickland reaction)
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PWY-8188
L-carnitine degradation II
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PWY-3641
L-cysteine biosynthesis III (from L-homocysteine)
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HOMOCYSDEGR-PWY
L-glutamate biosynthesis III
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GLUTSYNIII-PWY
L-glutamate degradation I
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GLUTAMATE-DEG1-PWY
L-glutamate degradation V (via hydroxyglutarate)
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P162-PWY
L-glutamate degradation XI (reductive Stickland reaction)
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PWY-8190
L-histidine biosynthesis
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HISTSYN-PWY
L-isoleucine degradation II
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PWY-5078
L-leucine degradation III
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PWY-5076
L-lysine fermentation to acetate and butanoate
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P163-PWY
L-malate degradation II
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PWY-7686
L-methionine degradation III
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PWY-5082
L-phenylalanine degradation III
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PWY-5079
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tyrosine degradation III
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PWY3O-4108
L-valine degradation II
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PWY-5057
linalool biosynthesis I
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PWY-7182
linamarin degradation
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PWY-3121
linoleate metabolites biosynthesis
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PWY-8395
linustatin bioactivation
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PWY-7091
lotaustralin degradation
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PWY-6002
lutein biosynthesis
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PWY-5947
malate/L-aspartate shuttle pathway
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MALATE-ASPARTATE-SHUTTLE-PWY
maresin biosynthesis
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PWY-8356
melatonin degradation I
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PWY-6398
methanol oxidation to formaldehyde IV
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PWY-5506
methyl indole-3-acetate interconversion
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PWY-6303
methyl phomopsenoate biosynthesis
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PWY-7721
methyl tert-butyl ether degradation
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PWY-7779
methylaspartate cycle
methylerythritol phosphate pathway I
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NONMEVIPP-PWY
methylerythritol phosphate pathway II
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PWY-7560
methylsalicylate degradation
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PWY18C3-24
mevalonate degradation
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PWY-5074
mevalonate pathway I (eukaryotes and bacteria)
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PWY-922
mevalonate pathway II (haloarchaea)
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PWY-6174
mevalonate pathway III (Thermoplasma)
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PWY-7524
mevalonate pathway IV (archaea)
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PWY-8125
mixed acid fermentation
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FERMENTATION-PWY
mono-trans, poly-cis decaprenyl phosphate biosynthesis
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PWY-6383
myxol-2' fucoside biosynthesis
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PWY-6279
neolinustatin bioactivation
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PWY-7092
neopentalenoketolactone and pentalenate biosynthesis
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PWY-6919
nicotine degradation IV
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PWY66-201
nicotine degradation V
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PWY66-221
nitrate reduction I (denitrification)
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DENITRIFICATION-PWY
nitrate reduction IX (dissimilatory)
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PWY0-1581
nitrate reduction VII (denitrification)
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PWY-6748
nitrate reduction X (dissimilatory, periplasmic)
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PWY0-1584
nitrifier denitrification
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PWY-7084
nitrite-dependent anaerobic methane oxidation
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PWY-6523
noradrenaline and adrenaline degradation
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PWY-6342
o-diquinones biosynthesis
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PWY-6752
okenone biosynthesis
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PWY-7591
oleate beta-oxidation
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PWY0-1337
oleate biosynthesis II (animals and fungi)
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PWY-5996
ophiobolin F biosynthesis
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PWY-7720
palmitoleate biosynthesis IV (fungi and animals)
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PWY3O-1801
paspaline biosynthesis
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PWY-7492
pectin degradation II
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PWY-7248
pentalenolactone biosynthesis
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PWY-6915
phenylethanol biosynthesis
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PWY-5751
phosphate acquisition
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PWY-6348
phosphopantothenate biosynthesis I
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PANTO-PWY
phytol degradation
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PWY66-389
phytosterol biosynthesis (plants)
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PWY-2541
plaunotol biosynthesis
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PWY-6691
poly-hydroxy fatty acids biosynthesis
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PWY-6710
polyhydroxybutanoate biosynthesis
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PWY1-3
pyruvate fermentation to (R)-lactate
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PWY-8274
pyruvate fermentation to acetone
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PWY-6588
pyruvate fermentation to butanoate
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CENTFERM-PWY
pyruvate fermentation to butanol I
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PWY-6583
pyruvate fermentation to butanol II (engineered)
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PWY-6883
pyruvate fermentation to ethanol I
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PWY-5480
pyruvate fermentation to ethanol II
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PWY-5486
pyruvate fermentation to ethanol III
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PWY-6587
pyruvate fermentation to hexanol (engineered)
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PWY-6863
pyruvate fermentation to isobutanol (engineered)
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PWY-7111
pyruvate fermentation to propanoate I
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P108-PWY
reactive oxygen species degradation
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DETOX1-PWY-1
reductive TCA cycle I
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P23-PWY
reductive TCA cycle II
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PWY-5392
retinol biosynthesis
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PWY-6857
salidroside biosynthesis
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PWY-6802
serotonin degradation
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PWY-6313
sorgoleone biosynthesis
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PWY-5987
starch degradation I
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PWY-842
starch degradation II
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PWY-6724
stellatic acid biosynthesis
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PWY-7736
sucrose degradation III (sucrose invertase)
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PWY-621
sucrose degradation V (sucrose alpha-glucosidase)
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PWY66-373
superoxide radicals degradation
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DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
superpathway of glucose and xylose degradation
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PWY-6901
superpathway of glyoxylate cycle and fatty acid degradation
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PWY-561
superpathway of methylsalicylate metabolism
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PWY18C3-25
taurine biosynthesis III
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PWY-8359
TCA cycle I (prokaryotic)
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TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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P105-PWY
TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VIII (Chlamydia)
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TCA-1
trans, trans-farnesyl diphosphate biosynthesis
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PWY-5123
triacylglycerol degradation
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LIPAS-PWY
tRNA processing
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PWY0-1479
urea degradation II
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PWY-5704
valproate beta-oxidation
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PWY-8182
vancomycin resistance I
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PWY-6454
vanillin biosynthesis I
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PWY-5665
viridicatumtoxin biosynthesis
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PWY-7659
zymosterol biosynthesis
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PWY-6074
methylaspartate cycle
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PWY-6728
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ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
-
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UniProt
a basidiomycetous yeast, the sexual state of Phaffia rhodozyma, gene crtE
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wild-type strains ATCC 24203, ATCC 96594, and ATCC 96815, and astaxanthin-overproducing recombinant strains VKPM and Y2410, gene crtS
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
additional information
additional information
-
optimal growth conditions, no activity in glucose-grown cells, overview
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
LINKS TO OTHER DATABASES (specific for Phaffia rhodozyma)
SILVA: 16S/18S rRNA, 23S/28S rRNA
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Release 2023.1 (January 2023)
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