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Organism related
Word Map for Organism Paraburkholderia xenovorans
- Paraburkholderia xenovorans
- dioxygenase
- biphenyls
- polychlorobiphenyls
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polychlorinated
- chlorobiphenyls
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dioxygenation
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pcb-degrading
- dibenzofurans
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pcb-contaminated
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regiospecificity
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hopdas
- pseudoalcaligenes
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aroclor
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2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic
- globerulus
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bpdos
- 2,3-dihydroxybiphenyls
TaxTree of Organism Paraburkholderia xenovorans
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EC NUMBER 
COMMENTARY 
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
(S)-propane-1,2-diol degradation
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PWY-7013
1,2-propanediol biosynthesis from lactate (engineered)
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PWY-7541
1,5-anhydrofructose degradation
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PWY-6992
1-butanol autotrophic biosynthesis (engineered)
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PWY-6886
2,2'-dihydroxybiphenyl degradation
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PWY-7009
2,4-dichlorophenoxyacetate degradation
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PWY-6085
2,5-xylenol and 3,5-xylenol degradation
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PWY-7698
2-aminoethylphosphonate degradation I
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PHOSPHONOTASE-PWY
2-aminophenol degradation
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PWY-6210
2-chlorobenzoate degradation
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PWY-6221
2-deoxy-alpha-D-ribose 1-phosphate degradation
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PWY-7180
2-deoxy-D-ribose degradation I
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PWY-8060
2-hydroxybiphenyl degradation
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PWY-7008
2-hydroxypenta-2,4-dienoate degradation
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PWY-5162
2-nitrotoluene degradation
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PWY-5641
3,3'-disulfanediyldipropannoate degradation
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PWY-7462
3,3'-thiodipropanoate degradation
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PWY-7465
3-hydroxypropanoate cycle
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PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
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PWY-5789
3-methylthiopropanoate biosynthesis
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PWY-5389
4-chloro-2-methylphenoxyacetate degradation
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PWY-6086
4-chlorobenzoate degradation
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PWY-6215
4-chloronitrobenzene degradation
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PWY-5645
4-coumarate degradation (aerobic)
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PWY-8002
4-hydroxy-2-nonenal detoxification
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PWY-7112
4-hydroxymandelate degradation
4-hydroxyphenylacetate degradation
4-methylcatechol degradation (ortho cleavage)
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PWY-6185
4-methylphenol degradation to protocatechuate
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PWY-7700
4-nitrotoluene degradation II
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PWY-5644
4-sulfocatechol degradation
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PWY-6041
acetone degradation I (to methylglyoxal)
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PWY-5451
acetone degradation III (to propane-1,2-diol)
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PWY-7466
acetylene degradation (anaerobic)
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P161-PWY
allopregnanolone biosynthesis
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PWY-7455
alpha-tomatine degradation
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PWY18C3-5
Amaryllidacea alkaloids biosynthesis
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PWY-7826
anaerobic aromatic compound degradation (Thauera aromatica)
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BENZCOA-PWY
anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
anaerobic energy metabolism (invertebrates, mitochondrial)
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PWY-7384
androstenedione degradation I (aerobic)
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PWY-6944
apratoxin A biosynthesis
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PWY-8361
ATP biosynthesis
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PWY-7980
backdoor pathway of androgen biosynthesis
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PWY-8200
benzoate biosynthesis I (CoA-dependent, beta-oxidative)
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PWY-6443
benzoate degradation II (aerobic and anaerobic)
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PWY-283
benzoyl-CoA degradation I (aerobic)
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PWY-1361
Bifidobacterium shunt
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P124-PWY
bile acid biosynthesis, neutral pathway
biphenyl degradation
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PWY5F9-12
bisphenol A degradation
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PWY-7757
bupropion degradation
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PWY66-241
camalexin biosynthesis
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CAMALEXIN-SYN
carbazole degradation
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PWY-6550
catechol degradation to 2-hydroxypentadienoate I
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P183-PWY
catechol degradation to 2-hydroxypentadienoate II
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PWY-5419
catechol degradation to beta-ketoadipate
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CATECHOL-ORTHO-CLEAVAGE-PWY
cellulose degradation II (fungi)
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PWY-6788
cholesterol degradation to androstenedione I (cholesterol oxidase)
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PWY-6945
conversion of succinate to propanoate
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PWY0-43
coumarin biosynthesis (via 2-coumarate)
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PWY-5176
crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered)
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PWY-7854
D-glucuronate degradation I
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PWY-5525
dibenzofuran degradation
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P662-PWY
diphenyl ethers degradation
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PWY-7747
Entner-Doudoroff pathway I
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PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
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PWY-2221
ethanol degradation I
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ETOH-ACETYLCOA-ANA-PWY
ethanol degradation IV
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PWY66-162
ethanolamine utilization
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PWY0-1477
ethene biosynthesis V (engineered)
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PWY-7124
firefly bioluminescence
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PWY-7913
formaldehyde assimilation I (serine pathway)
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PWY-1622
gentisate degradation I
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PWY-6223
gentisate degradation II
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PWY-7469
gliotoxin biosynthesis
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PWY-7533
gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
gluconeogenesis III
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PWY66-399
glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
glycerol degradation to butanol
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PWY-7003
glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
glyoxylate assimilation
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PWY-5744
heterolactic fermentation
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P122-PWY
homocysteine and cysteine interconversion
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PWY-801
hydrogen sulfide biosynthesis II (mammalian)
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PWY66-426
incomplete reductive TCA cycle
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P42-PWY
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
itaconate degradation
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PWY-5749
L-arabinose degradation II
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PWY-5515
L-cysteine biosynthesis III (from L-homocysteine)
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HOMOCYSDEGR-PWY
L-cysteine degradation I
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CYSTEINE-DEG-PWY
L-glutamate degradation VI (to pyruvate)
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PWY-5087
L-isoleucine biosynthesis III
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PWY-5103
L-threonine degradation IV
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PWY-5436
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tyrosine degradation I
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TYRFUMCAT-PWY
linamarin degradation
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PWY-3121
linustatin bioactivation
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PWY-7091
lotaustralin degradation
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PWY-6002
melatonin degradation I
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PWY-6398
methanogenesis from H2 and CO2
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METHANOGENESIS-PWY
methanogenesis from methoxylated aromatic compounds
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PWY-8304
methanol oxidation to formaldehyde IV
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PWY-5506
methyl indole-3-acetate interconversion
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PWY-6303
methylaspartate cycle
methylhalides biosynthesis (plants)
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PWY-6730
methylsalicylate degradation
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PWY18C3-24
mixed acid fermentation
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FERMENTATION-PWY
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
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PWY-6397
naphthalene degradation (aerobic)
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PWY-5427
neolinustatin bioactivation
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PWY-7092
nicotine degradation IV
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PWY66-201
nicotine degradation V
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PWY66-221
O-antigen building blocks biosynthesis (E. coli)
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OANTIGEN-PWY
oxalate degradation II
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PWY-6695
p-cumate degradation to 2-hydroxypentadienoate
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PWY-5163
partial TCA cycle (obligate autotrophs)
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PWY-5913
pentachlorophenol degradation
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PCPDEG-PWY
phosalacine biosynthesis
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PWY-7769
phosphinothricin tripeptide biosynthesis
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PWY-6322
phosphonoacetate degradation
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P483-PWY
photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
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PWY-7218
polybrominated dihydroxylated diphenyl ethers biosynthesis
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PWY-7934
polyhydroxybutanoate biosynthesis
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PWY1-3
polyhydroxydecanoate biosynthesis
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PWY-6657
propanoyl CoA degradation I
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PROPIONMET-PWY
protocatechuate degradation II (ortho-cleavage pathway)
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PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY
pyruvate fermentation to ethanol I
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PWY-5480
pyruvate fermentation to ethanol III
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PWY-6587
pyruvate fermentation to propanoate I
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P108-PWY
reactive oxygen species degradation
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DETOX1-PWY-1
reductive TCA cycle I
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P23-PWY
reductive TCA cycle II
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PWY-5392
retinol biosynthesis
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PWY-6857
Rubisco shunt
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PWY-5723
salicortin biosynthesis
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PWY-6763
salicylate degradation IV
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PWY-6640
spongiadioxin C biosynthesis
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PWY-7935
sulfoacetaldehyde degradation IV
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PWY-8062
superoxide radicals degradation
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DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
superpathway of glucose and xylose degradation
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PWY-6901
superpathway of glyoxylate cycle and fatty acid degradation
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PWY-561
superpathway of methylsalicylate metabolism
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PWY18C3-25
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
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PWY-7328
taurine biosynthesis I
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PWY-5331
taurine biosynthesis III
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PWY-8359
TCA cycle I (prokaryotic)
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TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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P105-PWY
TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VI (Helicobacter)
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REDCITCYC
TCA cycle VII (acetate-producers)
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PWY-7254
TCA cycle VIII (Chlamydia)
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TCA-1
testosterone and androsterone degradation to androstendione (aerobic)
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PWY-6943
tetrahydromethanopterin biosynthesis
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PWY-6148
tetrahydroxyxanthone biosynthesis (from benzoate)
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PWY-5001
thioredoxin pathway
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THIOREDOX-PWY
toluene degradation II (aerobic) (via 4-methylcatechol)
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TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
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TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
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TOLUENE-DEG-2-OH-PWY
triethylamine degradation
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PWY-7085
UDP-alpha-D-galactofuranose biosynthesis
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PWY-7622
vanillin biosynthesis I
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PWY-5665
xylitol degradation I
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LARABITOLUTIL-PWY
xyloglucan degradation II (exoglucanase)
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PWY-6807
4-hydroxymandelate degradation
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4-HYDROXYMANDELATE-DEGRADATION-PWY
4-hydroxyphenylacetate degradation
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3-HYDROXYPHENYLACETATE-DEGRADATION-PWY
bile acid biosynthesis, neutral pathway
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PWY-6061
methylaspartate cycle
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PWY-6728
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ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
657626, 672667, 674342, 675454, 685710, 687385, 698496, 702377, 704700, 710770, 712774, 714244, 721651, 722458, 724341, 725296, 726322, 735243, 742574, 743615, 746828, 764545
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UniProt
containing the enzyme-encoding plasmid pJP4, genes tfdBI and tfdBII
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
LINKS TO OTHER DATABASES (specific for Paraburkholderia xenovorans)
SILVA: 16S/18S rRNA, 23S/28S rRNA
: 152503
