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Organism related
Word Map for Organism Oryza sativa
- Oryza sativa
- paddy
- straw
- cereal
- barley
- cook
- flour
- kinases
- sorghum
- endosperm
- amylose
- tiller
- xanthomonas
- texture
- triticum
- gibberellin
- phytohormone
- infant
- auxin
- dwarf
- aestivum
- ethylene
- viscosity
- manure
- mirnas
- village
- mycotoxin
- aflatoxin
- kernel
- finger
- stripe
- sugarcane
- peanut
- micronutrient
- silicon
- thuringiensis
- ubiquitination
-
two-hybrid
- hordeum
- cytokinin
- alpha-amylase
- selenium
- cassava
-
extrude
- nipponbare
-
cis-acting
-
gluten
-
loss-of-function
-
retrogradation
- panicle
- overweight
TaxTree of Organism Oryza sativa
Condensed Tree View
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EC NUMBER 
COMMENTARY 
-
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
preliminary BRENDA-supplied EC number
reinstated 2006, had been eliminated in 1972
preliminary BRENDA-supplied EC number
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(-)-maackiain biosynthesis
-
-
PWY-2464
(-)-medicarpin biosynthesis
-
-
PWY-2463
(1'S,5'S)-averufin biosynthesis
-
-
PWY-5954
(1,4)-beta-D-xylan degradation
-
-
PWY-6717
(3E)-4,8-dimethylnona-1,3,7-triene biosynthesis I
-
-
PWY-5434
(3R)-linalool biosynthesis
-
-
PWY-7709
(3R)-N-[(2S)-1-hydroxy-6-[(3R)-3-isocyanobutanamido]hexan-2-yl]-3-isocyanobutanamide biosynthesis
-
-
PWY-8320
(3S)-linalool biosynthesis
-
-
PWY-7141
(4R)-carvone biosynthesis
-
-
PWY-5928
(4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis II (4-desaturase)
-
-
PWY-7728
(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)
-
-
PWY-7726
(5R)-carbapenem carboxylate biosynthesis
(5Z)-dodecenoate biosynthesis I
-
-
PWY0-862
(5Z)-dodecenoate biosynthesis II
-
-
PWY-7858
(5Z)-icosenoate biosynthesis
-
-
PWY-5361
(7Z,10Z,13Z)-hexadecatrienoate biosynthesis
-
-
PWY-7590
(8E,10E)-dodeca-8,10-dienol biosynthesis
-
-
PWY-7654
(9Z)-tricosene biosynthesis
-
-
PWY-7035
(aminomethyl)phosphonate degradation
-
-
PWY-7805
(E,E)-4,8,12-trimethyltrideca-1,3,7,11-tetraene biosynthesis
-
-
PWY-6668
(Kdo)2-lipid A modification (H. pylori)
-
-
PWY2DNV-3
(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)
-
-
PWY-7216
(R)-cysteate degradation
-
-
PWY-6642
(R,R)-butanediol biosynthesis
-
-
PWY-5951
(R,R)-butanediol degradation
-
-
PWY3O-246
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
(S)-propane-1,2-diol degradation
-
-
PWY-7013
(S)-reticuline biosynthesis I
-
-
PWY-3581
(S)-reticuline biosynthesis II
-
-
PWY-6133
(Z)-butanethial-S-oxide biosynthesis
-
-
PWY-6900
(Z)-phenylmethanethial S-oxide biosynthesis
-
-
PWY-6539
1,2-dichloroethane degradation
-
-
12DICHLORETHDEG-PWY
1,3-beta-D-glucan biosynthesis
-
-
PWY-6773
1,3-propanediol biosynthesis (engineered)
-
-
PWY-7385
1,4-dichlorobenzene degradation
-
-
14DICHLORBENZDEG-PWY
1,5-anhydrofructose degradation
-
-
PWY-6992
1-butanol autotrophic biosynthesis (engineered)
-
-
PWY-6886
1-methylpyrrolinium biosynthesis
-
-
PWY-5315
1-tuberculosinyladenosine biosynthesis
-
-
PWY-5935
10-cis-heptadecenoyl-CoA degradation (yeast)
-
-
PWY-7337
10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
-
-
PWY-7339
10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
-
-
PWY-7338
11-oxyandrogens biosynthesis
-
-
PWY-8202
15-epi-lipoxin biosynthesis
-
-
PWY66-393
1D-myo-inositol hexakisphosphate biosynthesis I (from Ins(1,4,5)P3)
-
-
PWY-6361
1D-myo-inositol hexakisphosphate biosynthesis II (mammalian)
-
-
PWY-6362
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)
-
-
PWY-4661
1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium)
-
-
PWY-6372
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3)
-
-
PWY-6554
2'-deoxymugineic acid phytosiderophore biosynthesis
-
-
PWY-5912
2,3-cis-flavanols biosynthesis
-
-
PWY-6035
2,3-dihydroxybenzoate biosynthesis
-
-
PWY-5901
2,3-trans-flavanols biosynthesis
-
-
PWY-6029
2,4-dinitrotoluene degradation
-
-
PWY-5642
2-amino-3-hydroxycyclopent-2-enone biosynthesis
-
-
PWY-7536
2-arachidonoylglycerol biosynthesis
-
-
PWY-8052
2-carboxy-1,4-naphthoquinol biosynthesis
-
-
PWY-5837
2-deoxy-alpha-D-ribose 1-phosphate degradation
-
-
PWY-7180
2-deoxy-D-glucose 6-phosphate degradation
-
-
PWY-8121
2-deoxy-D-ribose degradation I
-
-
PWY-8060
2-deoxy-D-ribose degradation II
-
-
PWY-8058
2-methyl-branched fatty acid beta-oxidation
-
-
PWY-8181
2-methylcitrate cycle I
-
-
PWY0-42
2-methylcitrate cycle II
-
-
PWY-5747
2-methylpropene degradation
-
-
PWY-7778
2-nitrotoluene degradation
-
-
PWY-5641
2-oxobutanoate degradation II
-
-
2OXOBUTYRATECAT-PWY
2-oxoglutarate decarboxylation to succinyl-CoA
-
-
PWY-5084
2-oxoisovalerate decarboxylation to isobutanoyl-CoA
-
-
PWY-5046
24-epi-campesterol, fucosterol, and clionasterol biosynthesis (diatoms)
-
-
PWY-8238
3,4,6-trichlorocatechol degradation
-
-
PWY-6094
3,4-dichlorobenzoate degradation
-
-
PWY-6217
3,5-dichlorocatechol degradation
-
-
PWY-6084
3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
-
-
CHLOROPHYLL-SYN
3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)
-
-
PWY-5531
3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
-
-
PWY-7159
3-(4-hydroxyphenyl)pyruvate biosynthesis
-
-
PWY-5886
3-chlorobenzoate degradation II (via protocatechuate)
-
-
PWY-6216
3-chlorocatechol degradation I (ortho)
-
-
PWY-6089
3-chlorocatechol degradation II (ortho)
-
-
PWY-6193
3-dehydroquinate biosynthesis I
-
-
PWY-6164
3-dehydroquinate biosynthesis II (archaea)
-
-
PWY-6160
3-hydroxy-4-methyl-anthranilate biosynthesis I
-
-
PWY-7717
3-hydroxy-4-methyl-anthranilate biosynthesis II
-
-
PWY-7765
3-hydroxypropanoate cycle
-
-
PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
-
-
PWY-5789
3-hydroxyquinaldate biosynthesis
-
-
PWY-7733
3-methyl-branched fatty acid alpha-oxidation
-
-
PWY66-387
3-methylarginine biosynthesis
-
-
PWY-6511
3-methylbutanol biosynthesis (engineered)
-
-
PWY-6871
3-methylthiopropanoate biosynthesis
-
-
PWY-5389
3-phenylpropanoate degradation
-
-
P281-PWY
3-phosphoinositide biosynthesis
-
-
PWY-6352
3-phosphoinositide degradation
-
-
PWY-6368
4,5-dichlorocatechol degradation
-
-
PWY-6093
4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis II
-
-
PWY-7282
4-aminobenzoate biosynthesis I
-
-
PWY-6543
4-aminobutanoate degradation I
-
-
PWY-6535
4-aminobutanoate degradation II
-
-
PWY-6537
4-aminobutanoate degradation III
-
-
PWY-6536
4-aminobutanoate degradation IV
-
-
PWY-6473
4-aminobutanoate degradation V
-
-
PWY-5022
4-chlorocatechol degradation
-
-
PWY-6087
4-coumarate degradation (aerobic)
-
-
PWY-8002
4-coumarate degradation (anaerobic)
-
-
PWY-7046
4-ethylphenol degradation (anaerobic)
-
-
PWY-6080
4-hydroxy-2(1H)-quinolone biosynthesis
-
-
PWY-6661
4-hydroxy-2-nonenal detoxification
-
-
PWY-7112
4-hydroxy-3-prenylbenzoate biosynthesis
-
-
PWY-7303
4-hydroxybenzoate biosynthesis I (eukaryotes)
-
-
PWY-5754
4-hydroxybenzoate biosynthesis II (bacteria)
-
-
PWY-5755
4-hydroxybenzoate biosynthesis III (plants)
-
-
PWY-6435
4-oxopentanoate degradation
-
-
PWY-7948
5'-deoxyadenosine degradation II
-
-
PWY-8131
5,6-dimethylbenzimidazole biosynthesis I (aerobic)
-
-
PWY-5523
5-aminoimidazole ribonucleotide biosynthesis I
-
-
PWY-6121
5-aminoimidazole ribonucleotide biosynthesis II
-
-
PWY-6122
5-deoxystrigol biosynthesis
-
-
PWY-7101
5-oxo-L-proline metabolism
-
-
PWY-7942
6-gingerol analog biosynthesis (engineered)
-
-
PWY-6920
6-hydroxymethyl-dihydropterin diphosphate biosynthesis
-
-
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
-
-
PWY-6147
6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium)
-
-
PWY-7852
8-amino-7-oxononanoate biosynthesis I
-
-
PWY-6519
8-amino-7-oxononanoate biosynthesis IV
-
-
PWY-8203
9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
-
-
PWY-7340
9-lipoxygenase and 9-allene oxide synthase pathway
-
-
PWY-5407
9-lipoxygenase and 9-hydroperoxide lyase pathway
-
-
PWY-5408
ABH and Lewis epitopes biosynthesis from type 1 precursor disaccharide
-
-
PWY-7832
ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide
-
-
PWY-7831
abietic acid biosynthesis
-
-
PWY-5411
abscisic acid biosynthesis
-
-
PWY-695
Ac/N-end rule pathway
-
-
PWY-7800
acetaldehyde biosynthesis I
-
-
PWY-6333
acetaldehyde biosynthesis II
-
-
PWY-6330
acetate and ATP formation from acetyl-CoA I
-
-
PWY0-1312
acetate and ATP formation from acetyl-CoA III
-
-
PWY-8328
acetate conversion to acetyl-CoA
-
-
PWY0-1313
acetoacetate degradation (to acetyl CoA)
-
-
ACETOACETATE-DEG-PWY
acetone degradation I (to methylglyoxal)
-
-
PWY-5451
acetone degradation III (to propane-1,2-diol)
-
-
PWY-7466
acetyl-CoA biosynthesis from citrate
-
-
PWY-5172
acetyl-CoA fermentation to butanoate
-
-
PWY-5676
acetylene degradation (anaerobic)
-
-
P161-PWY
acridone alkaloid biosynthesis
-
-
PWY-5958
acrylate degradation I
-
-
PWY-6373
acrylonitrile degradation I
-
-
PWY-7308
acyl carrier protein activation
-
-
PWY-6012-1
acyl carrier protein metabolism
-
-
PWY-6012
acyl-CoA hydrolysis
-
-
PWY-5148
acyl-[acyl-carrier protein] thioesterase pathway
-
-
PWY-5142
adenine and adenosine salvage I
-
-
P121-PWY
adenine and adenosine salvage II
-
-
PWY-6605
adenine and adenosine salvage III
-
-
PWY-6609
adenine and adenosine salvage V
-
-
PWY-6611
adenine and adenosine salvage VI
-
-
PWY-6619
adenine salvage
-
-
PWY-6610
adenosine deoxyribonucleotides de novo biosynthesis I
-
-
PWY-7227
adenosine deoxyribonucleotides de novo biosynthesis II
-
-
PWY-7220
adenosine nucleotides degradation I
-
-
PWY-6596
adenosine nucleotides degradation II
-
-
SALVADEHYPOX-PWY
adenosine ribonucleotides de novo biosynthesis
-
-
PWY-7219
adipate biosynthesis
-
-
PWY-8347
adipate degradation
adlupulone and adhumulone biosynthesis
-
-
PWY-7857
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
aerobic respiration III (alternative oxidase pathway)
-
-
PWY-4302
ajmaline and sarpagine biosynthesis
-
-
PWY-5301
aldoxime degradation
-
-
P345-PWY
alginate degradation
-
-
PWY-6986
alkane biosynthesis I
-
-
PWY-7032
alkane biosynthesis II
-
-
PWY-7033
alkane oxidation
-
-
PWY-2724
alkylnitronates degradation
-
-
PWY-723
all-trans-farnesol biosynthesis
-
-
PWY-6859
allantoin degradation to glyoxylate II
-
-
PWY-5692
allantoin degradation to ureidoglycolate I (urea producing)
-
-
PWY-5697
allantoin degradation to ureidoglycolate II (ammonia producing)
-
-
PWY-5698
alliin metabolism
-
-
PWY-5706
allopregnanolone biosynthesis
-
-
PWY-7455
alpha-amyrin biosynthesis
-
-
PWY-5377
alpha-carotene biosynthesis
-
-
PWY-5946
alpha-linolenate biosynthesis I (plants and red algae)
-
-
PWY-5997
alpha-linolenate metabolites biosynthesis
-
-
PWY-8398
alpha-tomatine degradation
-
-
PWY18C3-5
Amaryllidacea alkaloids biosynthesis
-
-
PWY-7826
aminopropanol phosphate biosynthesis II
-
-
PWY-7378
aminopropylcadaverine biosynthesis
-
-
PWY0-1303
ammonia assimilation cycle I
-
-
PWY-6963
ammonia assimilation cycle II
-
-
PWY-6964
ammonia assimilation cycle III
-
-
AMMASSIM-PWY
ammonia oxidation I (aerobic)
-
-
AMMOXID-PWY
ammonia oxidation II (anaerobic)
-
-
P303-PWY
ammonia oxidation III
-
-
PWY-2242
amygdalin and prunasin degradation
-
-
PWY-6011
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
anaerobic energy metabolism (invertebrates, mitochondrial)
-
-
PWY-7384
anandamide biosynthesis I
-
-
PWY-8051
anandamide biosynthesis II
-
-
PWY-8053
anandamide degradation
-
-
PWY6666-1
anandamide lipoxygenation
-
-
PWY-8056
androgen biosynthesis
-
-
PWY66-378
androstenedione degradation I (aerobic)
-
-
PWY-6944
androstenedione degradation II (anaerobic)
-
-
PWY-8152
anteiso-branched-chain fatty acid biosynthesis
-
-
PWY-8173
anthocyanidin modification (Arabidopsis)
-
-
PWY-7450
anthocyanin biosynthesis
-
-
PWY-5125
anthocyanin biosynthesis (delphinidin 3-O-glucoside)
-
-
PWY-5153
anthocyanin biosynthesis (pelargonidin 3-O-glucoside)
-
-
PWY-7267
apigenin glycosides biosynthesis
-
-
PWY-6010
apratoxin A biosynthesis
-
-
PWY-8361
arachidonate biosynthesis I (6-desaturase, lower eukaryotes)
-
-
PWY-5353
arachidonate biosynthesis III (6-desaturase, mammals)
-
-
PWY-7592
arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)
-
-
PWY-7601
arachidonate biosynthesis V (8-detaturase, mammals)
-
-
PWY-7725
arachidonate metabolites biosynthesis
-
-
PWY-8397
Arg/N-end rule pathway (eukaryotic)
-
-
PWY-7799
arginine dependent acid resistance
-
-
PWY0-1299
aromatic glucosinolate activation
-
-
PWY-6684
aromatic biogenic amine degradation (bacteria)
-
-
PWY-7431
aromatic polyketides biosynthesis
-
-
PWY-6316
arsenate detoxification I
-
-
PWY-8264
arsenate detoxification III
-
-
PWY-8263
arsenate reduction (respiratory)
-
-
PWY-4601
arsenic detoxification (mammals)
-
-
PWY-4202
arsenic detoxification (plants)
-
-
PWY-8259
arsenic detoxification (yeast)
-
-
PWY-4621
arsenite to oxygen electron transfer
-
-
PWY-4521
arsenite to oxygen electron transfer (via azurin)
-
-
PWY-7429
arsonoacetate degradation
-
-
P482-PWY
artemisinin and arteannuin B biosynthesis
-
-
PWY-5195
ascorbate glutathione cycle
-
-
PWY-2261
ascorbate recycling (cytosolic)
-
-
PWY-6370
aspirin triggered resolvin D biosynthesis
-
-
PWY66-395
aspirin triggered resolvin E biosynthesis
-
-
PWY66-394
assimilatory sulfate reduction I
-
-
SO4ASSIM-PWY
assimilatory sulfate reduction II
-
-
SULFMETII-PWY
assimilatory sulfate reduction III
-
-
PWY-6683
assimilatory sulfate reduction IV
-
-
PWY1ZNC-1
astaxanthin biosynthesis (bacteria, fungi, algae)
-
-
PWY-5288
ATP biosynthesis
-
-
PWY-7980
atrazine degradation I (aerobic)
-
-
P141-PWY
atrazine degradation III
-
-
PWY-5731
atromentin biosynthesis
-
-
PWY-7518
autoinducer AI-1 biosynthesis
-
-
PWY-6157
autoinducer AI-2 biosynthesis I
-
-
PWY-6153
autoinducer AI-2 biosynthesis II (Vibrio)
-
-
PWY-6154
avenacin A-1 biosynthesis
-
-
PWY-7473
avenanthramide biosynthesis
-
-
PWY-8157
bacilysin biosynthesis
-
-
PWY-7626
backdoor pathway of androgen biosynthesis
-
-
PWY-8200
bacterial bioluminescence
-
-
PWY-7723
bacteriochlorophyll a biosynthesis
-
-
PWY-5526
bacteriochlorophyll c biosynthesis
-
-
PWY-7759
bacteriochlorophyll d biosynthesis
-
-
PWY-7758
bacteriochlorophyll e biosynthesis
-
-
PWY-7760
baicalein degradation (hydrogen peroxide detoxification)
-
-
PWY-7214
baicalein metabolism
-
-
PWY-7212
benzoate biosynthesis I (CoA-dependent, beta-oxidative)
-
-
PWY-6443
benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
-
-
PWY-6444
benzoate biosynthesis III (CoA-dependent, non-beta-oxidative)
-
-
PWY-6446
benzoyl-CoA biosynthesis
-
-
PWY-6458
benzoyl-CoA degradation I (aerobic)
-
-
PWY-1361
beta-(1,4)-mannan degradation
-
-
PWY-7456
beta-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation
-
-
PWY-7586
beta-alanine biosynthesis I
-
-
PWY-3981
beta-alanine biosynthesis II
-
-
PWY-3941
beta-alanine biosynthesis IV
-
-
PWY-5760
beta-alanine degradation I
-
-
BETA-ALA-DEGRADATION-I-PWY
beta-alanine degradation II
-
-
PWY-1781
beta-carboline biosynthesis
-
-
PWY-5877
beta-carotene biosynthesis
-
-
PWY-5943
beta-caryophyllene biosynthesis
-
-
PWY-6275
beta-D-glucuronide and D-glucuronate degradation
-
-
PWY-7247
beta-D-mannosyl phosphomycoketide biosynthesis
-
-
PWY-7740
betalamic acid biosynthesis
-
-
PWY-5394
betanidin degradation
-
-
PWY-5461
betaxanthin biosynthesis
-
-
PWY-5426
betaxanthin biosynthesis (via dopamine)
-
-
PWY-5403
Bifidobacterium shunt
-
-
P124-PWY
bile acid biosynthesis, neutral pathway
bile acids deconjugation
-
-
PWY-8135
biochanin A conjugates interconversion
-
-
PWY-2861
biosynthesis of Lewis epitopes (H. pylori)
-
-
PWY-7833
biotin-carboxyl carrier protein assembly
-
-
PWY0-1264
bis(guanylyl tungstenpterin) cofactor biosynthesis
-
-
PWY-8168
bisabolene biosynthesis (engineered)
-
-
PWY-7102
bisucaberin biosynthesis
-
-
PWY-6381
brassicicene C biosynthesis
-
-
PWY-7517
brassinolide biosynthesis I
-
-
PWY-699
brassinolide biosynthesis II
-
-
PWY-2582
bryostatin biosynthesis
-
-
PWY-8047
bupropion degradation
-
-
PWY66-241
butachlor degradation
-
-
PWY-7771
butanol and isobutanol biosynthesis (engineered)
-
-
PWY-7396
C20 prostanoid biosynthesis
-
-
PWY66-374
C25,25 CDP-archaeol biosynthesis
-
-
PWY-8365
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
C4 photosynthetic carbon assimilation cycle, NADP-ME type
-
-
PWY-241
C4 photosynthetic carbon assimilation cycle, PEPCK type
-
-
PWY-7117
cadaverine biosynthesis
-
-
PWY0-1601
caffeine biosynthesis I
-
-
PWY-5037
caffeine biosynthesis II (via paraxanthine)
-
-
PWY-5038
caffeine degradation III (bacteria, via demethylation)
-
-
PWY-6538
caffeoylglucarate biosynthesis
-
-
PWY-6673
calonectrin biosynthesis
-
-
PWY-7711
Calvin-Benson-Bassham cycle
-
-
CALVIN-PWY
camalexin biosynthesis
-
-
CAMALEXIN-SYN
canavanine biosynthesis
-
-
PWY-5
canavanine degradation
-
-
PWY-31
cannabinoid biosynthesis
-
-
PWY-5140
capsaicin biosynthesis
-
-
PWY-5710
capsanthin and capsorubin biosynthesis
-
-
PWY-5174
capsiconiate biosynthesis
-
-
PWY-6027
carbaryl degradation
-
-
PWY-8111
carbofuran degradation I
-
-
PWY-8286
carbofuran degradation II
-
-
PWY-8287
carbofuran degradation III
-
-
PWY-8288
carbon disulfide oxidation I (anaerobic)
-
-
PWY-1164
carbon disulfide oxidation II (aerobic)
-
-
PWY-5336
carbon disulfide oxidation III (metazoa)
-
-
PWY-7926
cardenolide glucosides biosynthesis
-
-
PWY-6036
carnosate bioynthesis
-
-
PWY-7680
carotenoid cleavage
-
-
PWY-6806
catechol degradation to 2-hydroxypentadienoate I
-
-
P183-PWY
catechol degradation to 2-hydroxypentadienoate II
-
-
PWY-5419
catecholamine biosynthesis
CDP-6-deoxy-D-gulose biosynthesis
-
-
PWY-8139
CDP-diacylglycerol biosynthesis I
-
-
PWY-5667
CDP-diacylglycerol biosynthesis II
-
-
PWY0-1319
CDP-diacylglycerol biosynthesis III
-
-
PWY-5981
cellulose and hemicellulose degradation (cellulolosome)
-
-
PWY-6784
cellulose biosynthesis
-
-
PWY-1001
cellulose degradation II (fungi)
-
-
PWY-6788
ceramide and sphingolipid recycling and degradation (yeast)
-
-
PWY-7119
ceramide de novo biosynthesis
-
-
PWY3DJ-12
ceramide degradation (generic)
-
-
PWY-6483
ceramide degradation by alpha-oxidation
-
-
PWY66-388
chanoclavine I aldehyde biosynthesis
-
-
PWY-6493
chitin biosynthesis
-
-
PWY-6981
chitin deacetylation
-
-
PWY-7118
chitin degradation I (archaea)
-
-
PWY-6855
chitin degradation II (Vibrio)
-
-
PWY-6902
chitin degradation III (Serratia)
-
-
PWY-7822
chitin derivatives degradation
-
-
PWY-6906
chloramphenicol biosynthesis
-
-
PWY-8032
chlorobactene biosynthesis
-
-
PWY-7939
chlorogenic acid biosynthesis I
-
-
PWY-6039
chlorogenic acid biosynthesis II
-
-
PWY-6040
chlorogenic acid degradation
-
-
PWY-6781
chlorophyll a biosynthesis I
-
-
PWY-5086
chlorophyll a biosynthesis II
-
-
PWY-5064
chlorophyll a biosynthesis III
-
-
PWY-7764
chlorophyll a degradation I
-
-
PWY-5098
chlorophyll a degradation II
-
-
PWY-6927
chlorophyll a degradation III
-
-
PWY-7164
chlorophyll a2 biosynthesis
-
-
PWY-8126
chlorophyll b2 biosynthesis
-
-
PWY-8127
chlorophyll cycle
-
-
PWY-5068
chlorosalicylate degradation
-
-
PWY-6107
chlorpyrifos degradation
-
-
PWY-8065
cholesterol biosynthesis (algae, late side-chain reductase)
-
-
PWY-8191
cholesterol biosynthesis (diatoms)
-
-
PWY-8239
cholesterol biosynthesis (plants, early side-chain reductase)
-
-
PWY18C3-1
cholesterol biosynthesis I
-
-
PWY66-341
cholesterol biosynthesis II (via 24,25-dihydrolanosterol)
-
-
PWY66-3
cholesterol biosynthesis III (via desmosterol)
-
-
PWY66-4
cholesterol degradation to androstenedione I (cholesterol oxidase)
-
-
PWY-6945
cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
-
-
PWY-6946
choline biosynthesis I
-
-
PWY-3385
choline biosynthesis III
-
-
PWY-3561
choline degradation I
-
-
CHOLINE-BETAINE-ANA-PWY
choline degradation IV
-
-
PWY-7494
chorismate biosynthesis from 3-dehydroquinate
-
-
PWY-6163
chrysin biosynthesis
-
-
PWY-5363
chrysoeriol biosynthesis
-
-
PWY-6232
cichoriin interconversion
-
-
PWY-7057
cinnamoyl-CoA biosynthesis
-
-
PWY-6457
cis-abienol biosynthesis
-
-
PWY18C3-13
cis-geranyl-CoA degradation
-
-
PWY-6672
cis-vaccenate biosynthesis
cis-zeatin biosynthesis
-
-
PWY-2781
CMP phosphorylation
-
-
PWY-7205
CMP-legionaminate biosynthesis I
-
-
PWY-6749
CO2 fixation into oxaloacetate (anaplerotic)
-
-
PWYQT-4429
coenzyme A biosynthesis I (bacteria)
-
-
COA-PWY
coenzyme A biosynthesis II (eukaryotic)
-
-
PWY-7851
coenzyme A biosynthesis III (archaea)
-
-
PWY-8342
coenzyme B biosynthesis
-
-
P241-PWY
coenzyme B/coenzyme M regeneration I (methanophenazine-dependent)
-
-
PWY-5207
coenzyme M biosynthesis II
-
-
PWY-6643
colanic acid building blocks biosynthesis
-
-
COLANSYN-PWY
colupulone and cohumulone biosynthesis
-
-
PWY-5133
complex N-linked glycan biosynthesis (plants)
-
-
PWY-7920
complex N-linked glycan biosynthesis (vertebrates)
-
-
PWY-7426
coniferin metabolism
-
-
PWY-116
coumarin biosynthesis (via 2-coumarate)
-
-
PWY-5176
coumarins biosynthesis (engineered)
-
-
PWY-7398
creatine phosphate biosynthesis
-
-
PWY-6158
cremeomycin biosynthesis
-
-
PWY-8296
crepenynate biosynthesis
-
-
PWY-6013
crotonate fermentation (to acetate and cyclohexane carboxylate)
-
-
PWY-7401
crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered)
-
-
PWY-7854
curacin A biosynthesis
-
-
PWY-8358
curcuminoid biosynthesis
-
-
PWY-6432
cuticular wax biosynthesis
-
-
PWY-282
cutin biosynthesis
-
-
PWY-321
cyanate degradation
cyanide degradation
-
-
P401-PWY
cyanide detoxification I
-
-
ASPSYNII-PWY
cyanuric acid degradation II
-
-
PWY-5169
cyclic 2,3-bisphosphoglycerate biosynthesis
-
-
PWY-8098
cyclic electron flow
-
-
PWY-8270
cycloartenol biosynthesis
-
-
PWY-8028
cytochrome c biogenesis (system I type)
-
-
PWY-8147
cytochrome c biogenesis (system II type)
-
-
PWY-8146
cytokinin-O-glucosides biosynthesis
-
-
PWY-2902
cytosolic NADPH production (yeast)
-
-
PWY-7268
D-arabinitol degradation I
-
-
DARABITOLUTIL-PWY
D-arabinose degradation II
-
-
DARABCATK12-PWY
D-arabinose degradation V
-
-
PWY-8334
D-cycloserine biosynthesis
-
-
PWY-7274
D-galactosamine and N-acetyl-D-galactosamine degradation
-
-
PWY-7395
D-galactose degradation I (Leloir pathway)
-
-
PWY-6317
D-galactose degradation IV
-
-
PWY-6693
D-galactose detoxification
-
-
PWY-3821
D-glucuronate degradation I
-
-
PWY-5525
D-mannose degradation I
-
-
MANNCAT-PWY
D-mannose degradation II
-
-
PWY3O-1743
D-myo-inositol (1,4,5)-trisphosphate biosynthesis
-
-
PWY-6351
D-myo-inositol (1,4,5)-trisphosphate degradation
-
-
PWY-6363
D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis
-
-
PWY-6366
D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis
-
-
PWY-6365
D-myo-inositol-5-phosphate metabolism
-
-
PWY-6367
D-sorbitol biosynthesis I
-
-
PWY-5054
D-sorbitol degradation I
-
-
PWY-4101
D-sorbitol degradation II
-
-
SORBDEG-PWY
D-xylose degradation I
-
-
XYLCAT-PWY
D-xylose degradation III
-
-
PWY-6760
D-xylose degradation IV
-
-
PWY-7294
D-xylose degradation to ethylene glycol (engineered)
-
-
PWY-7178
D-xylose degradation V
-
-
PWY-8020
D-xylose degradation VI
-
-
PWY-8330
daidzein conjugates interconversion
-
-
PWY-2343
daphnetin modification
-
-
PWY-7055
daphnin interconversion
-
-
PWY-7056
daunorubicin biosynthesis
degradation of aromatic, nitrogen containing compounds
-
-
dehydroabietic acid biosynthesis
-
-
PWY-5421
desferrioxamine B biosynthesis
-
-
PWY-6376
desferrioxamine E biosynthesis
-
-
PWY-6375
detoxification of reactive carbonyls in chloroplasts
-
-
PWY-6786
dhurrin degradation
-
-
PWY-5976
di-homo-gamma-linolenate metabolites biosynthesis
-
-
PWY-8396
di-myo-inositol phosphate biosynthesis
-
-
PWY-6664
di-trans,poly-cis-undecaprenyl phosphate biosynthesis
-
-
PWY-5785
diacylglycerol and triacylglycerol biosynthesis
-
-
TRIGLSYN-PWY
DIBOA-glucoside biosynthesis
-
-
PWY-6949
diethylphosphate degradation
-
-
PWY-5491
digitoxigenin biosynthesis
-
-
PWY-6032
DIMBOA-glucoside biosynthesis
-
-
PWY-6950
dimethyl sulfide biosynthesis from methionine
-
-
PWY-7793
dimethylsulfoniopropanoate biosynthesis I (Wollastonia)
-
-
PWY-6054
dimethylsulfoniopropanoate biosynthesis II (Spartina)
-
-
PWY-6055
dipicolinate biosynthesis
-
-
PWY-8088
dissimilatory sulfate reduction I (to hydrogen sufide))
-
-
DISSULFRED-PWY
diterpene phytoalexins precursors biosynthesis
divinyl ether biosynthesis I
-
-
PWY-5406
divinyl ether biosynthesis II
-
-
PWY-5409
docosahexaenoate biosynthesis I (lower eukaryotes)
-
-
PWY-7053
docosahexaenoate biosynthesis III (6-desaturase, mammals)
-
-
PWY-7606
docosahexaenoate biosynthesis IV (4-desaturase, mammals)
-
-
PWY-7727
docosahexaenoate metabolites biosynthesis
-
-
PWY-8400
dolabralexins biosynthesis
-
-
PWY-7994
dolichol and dolichyl phosphate biosynthesis
dopamine degradation
-
-
PWY6666-2
drosopterin and aurodrosopterin biosynthesis
-
-
PWY-7442
dTDP-4-O-demethyl-beta-L-noviose biosynthesis
-
-
PWY-7301
dTDP-beta-L-rhamnose biosynthesis
-
-
DTDPRHAMSYN-PWY
dTDP-L-daunosamine biosynthesis
-
-
PWY-7814
dTDP-sibirosamine biosynthesis
-
-
PWY-8380
dTMP de novo biosynthesis (mitochondrial)
-
-
PWY66-385
dZTP biosynthesis
-
-
PWY-8289
ecdysone and 20-hydroxyecdysone biosynthesis
-
-
PWY-7300
echinatin biosynthesis
-
-
PWY-6325
ectoine biosynthesis
-
-
P101-PWY
ent-kaurene biosynthesis I
-
-
PWY-5032
enterobactin biosynthesis
Entner-Doudoroff pathway I
-
-
PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
-
-
NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
-
-
PWY-2221
ephedrine biosynthesis
-
-
PWY-5883
epoxysqualene biosynthesis
-
-
PWY-5670
ergosterol biosynthesis I
-
-
PWY-6075
ergosterol biosynthesis II
-
-
PWY-7154
ergothioneine biosynthesis I (bacteria)
-
-
PWY-7255
erythritol biosynthesis I
-
-
PWY-8372
erythritol biosynthesis II
-
-
PWY-8373
erythro-tetrahydrobiopterin biosynthesis I
-
-
PWY-5663
erythromycin D biosynthesis
-
-
PWY-7106
Escherichia coli serotype O:127 O antigen biosynthesis
-
-
PWY-8231
Escherichia coli serotype O:86 O antigen biosynthesis
-
-
PWY-7290
ethanol degradation I
-
-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
-
-
PWY66-21
ethanol degradation III
-
-
PWY66-161
ethanol degradation IV
-
-
PWY66-162
ethanolamine utilization
-
-
PWY0-1477
ethene biosynthesis I (plants)
-
-
ETHYL-PWY
ethene biosynthesis II (microbes)
-
-
PWY-6853
ethene biosynthesis III (microbes)
-
-
PWY-6854
ethene biosynthesis IV (engineered)
-
-
PWY-7126
ethene biosynthesis V (engineered)
-
-
PWY-7124
ethiin metabolism
-
-
PWY-5708
ethylbenzene degradation (anaerobic)
-
-
PWY-481
ethylmalonyl-CoA pathway
-
-
PWY-5741
eumelanin biosynthesis
-
-
PWY-6498
even iso-branched-chain fatty acid biosynthesis
-
-
PWY-8175
extended VTC2 cycle
-
-
PWY4FS-13
farnesene biosynthesis
-
-
PWY-5725
farnesylcysteine salvage pathway
-
-
PWY-6577
fatty acid alpha-oxidation I (plants)
-
-
PWY-2501
fatty acid beta-oxidation I (generic)
-
-
FAO-PWY
fatty acid beta-oxidation II (plant peroxisome)
-
-
PWY-5136
fatty acid beta-oxidation III (unsaturated, odd number)
-
-
PWY-5137
fatty acid beta-oxidation IV (unsaturated, even number)
-
-
PWY-5138
fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
-
-
PWY-6837
fatty acid beta-oxidation VI (mammalian peroxisome)
-
-
PWY66-391
fatty acid beta-oxidation VII (yeast peroxisome)
-
-
PWY-7288
fatty acid biosynthesis initiation (mitochondria)
-
-
PWY66-429
fatty acid biosynthesis initiation (plant mitochondria)
-
-
PWY-6799
fatty acid biosynthesis initiation (type I)
-
-
PWY-5966-1
fatty acid biosynthesis initiation (type II)
-
-
PWY-4381
fatty acid elongation -- saturated
-
-
FASYN-ELONG-PWY
fatty acid salvage
-
-
PWY-7094
Fe(II) oxidation
-
-
PWY-6692
FeMo cofactor biosynthesis
-
-
PWY-7710
fenchol biosynthesis II
-
-
PWY-6445
ferrichrome A biosynthesis
-
-
PWY-7571
ferulate and sinapate biosynthesis
-
-
PWY-5168
firefly bioluminescence
-
-
PWY-7913
flavin biosynthesis I (bacteria and plants)
-
-
RIBOSYN2-PWY
flavin biosynthesis II (archaea)
-
-
PWY-6167
flavin biosynthesis III (fungi)
-
-
PWY-6168
flavonoid biosynthesis
-
-
PWY1F-FLAVSYN
flavonoid biosynthesis (in equisetum)
-
-
PWY-6787
flavonoid di-C-glucosylation
-
-
PWY-7897
flavonol acylglucoside biosynthesis I - kaempferol derivatives
-
-
PWY-7168
flavonol acylglucoside biosynthesis III - quercetin derivatives
-
-
PWY-7172
flavonol biosynthesis
-
-
PWY-3101
flexixanthin biosynthesis
-
-
PWY-7947
fluoroacetate and fluorothreonine biosynthesis
-
-
PWY-6644
fluoroacetate degradation
-
-
PWY-6646
folate polyglutamylation
folate transformations I
-
-
PWY-2201
folate transformations II (plants)
-
-
PWY-3841
folate transformations III (E. coli)
-
-
1CMET2-PWY
formaldehyde assimilation I (serine pathway)
-
-
PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
-
-
PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
-
-
P185-PWY
formaldehyde oxidation I
-
-
RUMP-PWY
formaldehyde oxidation II (glutathione-dependent)
-
-
PWY-1801
formaldehyde oxidation IV (thiol-independent)
-
-
FORMASS-PWY
formate assimilation into 5,10-methylenetetrahydrofolate
-
-
PWY-1722
formate oxidation to CO2
-
-
PWY-1881
formate to nitrite electron transfer
-
-
PWY0-1585
formononetin conjugates interconversion
-
-
PWY-2904
free phenylpropanoid acid biosynthesis
-
-
PWY-2181
fructan biosynthesis
-
-
PWY-822
fructan degradation
-
-
PWY-862
fructose 2,6-bisphosphate biosynthesis
-
-
PWY66-423
fumitremorgin C biosynthesis
-
-
PWY-7525
fusicoccin A biosynthesis
-
-
PWY-6659
GABA shunt I
-
-
GLUDEG-I-PWY
GABA shunt II
-
-
PWY-8346
gala-series glycosphingolipids biosynthesis
-
-
PWY-7840
galactolipid biosynthesis I
-
-
PWY-401
galactolipid biosynthesis II
-
-
PWY-7666
gallate biosynthesis
-
-
PWY-6707
gallate degradation III (anaerobic)
-
-
P3-PWY
gamma-glutamyl cycle
-
-
PWY-4041
gamma-hexachlorocyclohexane degradation
-
-
GAMMAHEXCHLORDEG-PWY
gamma-linolenate biosynthesis II (animals)
-
-
PWY-6000
ganglio-series glycosphingolipids biosynthesis
-
-
PWY-7836
GDP-alpha-D-glucose biosynthesis
-
-
PWY-5661
GDP-L-galactose biosynthesis
-
-
PWY-5115
GDP-mannose biosynthesis
-
-
PWY-5659
genistein conjugates interconversion
-
-
PWY-2345
geosmin biosynthesis
-
-
PWY-5950
geraniol and geranial biosynthesis
-
-
PWY-5829
geranyl acetate biosynthesis
-
-
PWY-5835
geranyl diphosphate biosynthesis
-
-
PWY-5122
geranylgeranyl diphosphate biosynthesis
-
-
PWY-5120
gibberellin biosynthesis III (early C-13 hydroxylation)
-
-
PWY-5035
gibberellin inactivation I (2beta-hydroxylation)
-
-
PWY-102
ginsenosides biosynthesis
-
-
PWY-5672
gliotoxin biosynthesis
-
-
PWY-7533
globo-series glycosphingolipids biosynthesis
-
-
PWY-7838
glucocorticoid biosynthesis
-
-
PWY66-381
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
-
-
PWY66-399
glucose and glucose-1-phosphate degradation
-
-
GLUCOSE1PMETAB-PWY
glucose degradation (oxidative)
-
-
DHGLUCONATE-PYR-CAT-PWY
glucosinolate activation
-
-
PWY-5267
glucosinolate biosynthesis from dihomomethionine
-
-
PWYQT-4471
glucosinolate biosynthesis from hexahomomethionine
-
-
PWYQT-4475
glucosinolate biosynthesis from homomethionine
-
-
PWY-1187
glucosinolate biosynthesis from pentahomomethionine
-
-
PWYQT-4474
glucosinolate biosynthesis from phenylalanine
-
-
PWY-2821
glucosinolate biosynthesis from tetrahomomethionine
-
-
PWYQT-4473
glucosinolate biosynthesis from trihomomethionine
-
-
PWYQT-4472
glucosinolate biosynthesis from tryptophan
-
-
PWY-601
glucosinolate biosynthesis from tyrosine
-
-
PWY-7901
glucosylglycerol biosynthesis
-
-
PWY-7902
glutamate removal from folates
-
-
PWY-2161B
glutaminyl-tRNAgln biosynthesis via transamidation
-
-
PWY-5921
glutaryl-CoA degradation
-
-
PWY-5177
glutathione biosynthesis
-
-
GLUTATHIONESYN-PWY
glutathione-mediated detoxification I
-
-
PWY-4061
glutathione-mediated detoxification II
-
-
PWY-6842
glutathione-peroxide redox reactions
-
-
PWY-4081
glutathionylspermidine biosynthesis
-
-
PWY-4121
glycerol degradation I
-
-
PWY-4261
glycerol degradation II
-
-
PWY-6131
glycerol degradation to butanol
-
-
PWY-7003
glycerol degradation V
-
-
GLYCEROLMETAB-PWY
glycerol-3-phosphate shuttle
-
-
PWY-6118
glycerol-3-phosphate to cytochrome bo oxidase electron transfer
-
-
PWY0-1561
glycerol-3-phosphate to fumarate electron transfer
-
-
PWY0-1582
glycerol-3-phosphate to hydrogen peroxide electron transport
-
-
PWY0-1591
glycerophosphodiester degradation
-
-
PWY-6952
glycine betaine biosynthesis I (Gram-negative bacteria)
-
-
BETSYN-PWY
glycine betaine biosynthesis II (Gram-positive bacteria)
-
-
PWY-3722
glycine betaine biosynthesis III (plants)
-
-
PWY1F-353
glycine betaine degradation I
-
-
PWY-3661
glycine betaine degradation II (mammalian)
-
-
PWY-3661-1
glycine betaine degradation III
-
-
PWY-8325
glycine biosynthesis I
-
-
GLYSYN-PWY
glycine biosynthesis II
-
-
GLYCINE-SYN2-PWY
glycine biosynthesis III
-
-
GLYSYN-ALA-PWY
glycine cleavage
-
-
GLYCLEAV-PWY
glycine degradation (reductive Stickland reaction)
-
-
PWY-8015
glycogen biosynthesis I (from ADP-D-Glucose)
-
-
GLYCOGENSYNTH-PWY
glycogen biosynthesis II (from UDP-D-Glucose)
-
-
PWY-5067
glycogen biosynthesis III (from alpha-maltose 1-phosphate)
-
-
PWY-7900
glycogen degradation I
-
-
GLYCOCAT-PWY
glycogen degradation II
-
-
PWY-5941
glycolate and glyoxylate degradation I
-
-
GLYCOLATEMET-PWY
glycolate and glyoxylate degradation II
-
-
GLYOXDEG-PWY
glycolate and glyoxylate degradation III
-
-
PWY-6649
glycolipid desaturation
-
-
PWY-782
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
-
-
PWY-5484
glycolysis III (from glucose)
-
-
ANAGLYCOLYSIS-PWY
glycolysis IV
-
-
PWY-1042
glycolysis V (Pyrococcus)
-
-
P341-PWY
glycyrrhetinate biosynthesis
-
-
PWY-7066
glyoxylate assimilation
-
-
PWY-5744
glyoxylate cycle
-
-
GLYOXYLATE-BYPASS
glyphosate degradation I
-
-
PWY-7804
glyphosate degradation III
-
-
PWY-7807
gondoate biosynthesis (anaerobic)
-
-
PWY-7663
gossypol biosynthesis
-
-
PWY-5773
grixazone biosynthesis
-
-
PWY-7153
guanine and guanosine salvage I
-
-
PWY-6620
guanine and guanosine salvage II
-
-
PWY-6599
guanosine deoxyribonucleotides de novo biosynthesis I
-
-
PWY-7226
guanosine deoxyribonucleotides de novo biosynthesis II
-
-
PWY-7222
guanosine nucleotides degradation I
-
-
PWY-6607
guanosine nucleotides degradation II
-
-
PWY-6606
guanosine nucleotides degradation III
-
-
PWY-6608
guanosine ribonucleotides de novo biosynthesis
-
-
PWY-7221
guanylyl molybdenum cofactor biosynthesis
-
-
PWY-5964
heme b biosynthesis I (aerobic)
-
-
HEME-BIOSYNTHESIS-II
heme b biosynthesis II (oxygen-independent)
-
-
HEMESYN2-PWY
heme b biosynthesis V (aerobic)
-
-
HEME-BIOSYNTHESIS-II-1
heme degradation I
-
-
PWY-5874
heparin degradation
-
-
PWY-7644
heptadecane biosynthesis
-
-
PWY-6622
hesperitin glycoside biosynthesis
-
-
PWY-5105
heterolactic fermentation
-
-
P122-PWY
histamine biosynthesis
-
-
PWY-6173
histamine degradation
-
-
PWY-6181
homocysteine and cysteine interconversion
-
-
PWY-801
homogalacturonan biosynthesis
-
-
PWY-1061
homoglutathione biosynthesis
-
-
PWY-6840
homospermidine biosynthesis I
-
-
PWY-5907
homospermidine biosynthesis II
-
-
PWY-8149
hordatine biosynthesis
-
-
PWY-6448
hydrogen oxidation I (aerobic)
-
-
P283-PWY
hydrogen sulfide biosynthesis II (mammalian)
-
-
PWY66-426
hydrogen to fumarate electron transfer
-
-
PWY0-1576
hydroxycinnamic acid serotonin amides biosynthesis
-
-
PWY-5473
hydroxycinnamic acid tyramine amides biosynthesis
-
-
PWY-5474
hydroxylated fatty acid biosynthesis (plants)
-
-
PWY-6433
hypoglycin biosynthesis
-
-
PWY-5826
hypotaurine degradation
-
-
PWY-7387
icosapentaenoate biosynthesis I (lower eukaryotes)
-
-
PWY-6958
icosapentaenoate biosynthesis II (6-desaturase, mammals)
-
-
PWY-7049
icosapentaenoate biosynthesis III (8-desaturase, mammals)
-
-
PWY-7724
icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)
-
-
PWY-7602
icosapentaenoate biosynthesis VI (fungi)
-
-
PWY-6940
icosapentaenoate metabolites biosynthesis
-
-
PWY-8399
incomplete reductive TCA cycle
-
-
P42-PWY
indole glucosinolate activation (herbivore attack)
-
-
PWYQT-4476
indole glucosinolate activation (intact plant cell)
-
-
PWYQT-4477
indole-3-acetate biosynthesis I
-
-
PWYDQC-4
indole-3-acetate biosynthesis II
-
-
PWY-581
indole-3-acetate biosynthesis III (bacteria)
-
-
PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
-
-
PWY-5025
indole-3-acetate biosynthesis V (bacteria and fungi)
-
-
PWY-5026
indole-3-acetate biosynthesis VI (bacteria)
-
-
TRPIAACAT-PWY
indole-3-acetate inactivation IX
-
-
PWY-1741
indolmycin biosynthesis
-
-
PWY-7770
inosine 5'-phosphate degradation
-
-
PWY-5695
inositol diphosphates biosynthesis
-
-
PWY-6369
inulin degradation
-
-
PWY-8314
ipsdienol biosynthesis
-
-
PWY-7410
iron reduction and absorption
-
-
PWY-5934
isoflavonoid biosynthesis I
-
-
PWY-2002
isoflavonoid biosynthesis II
-
-
PWY-2083
isopenicillin N biosynthesis
-
-
PWY-5629
isopimaric acid biosynthesis
-
-
PWY-5422
isoprene biosynthesis II (engineered)
-
-
PWY-7391
isopropanol biosynthesis (engineered)
-
-
PWY-6876
isorenieratene biosynthesis I (actinobacteria)
-
-
PWY-7938
itaconate biosynthesis I
-
-
PWY-5750
itaconate degradation
-
-
PWY-5749
jadomycin biosynthesis
-
-
PWY-6679
jasmonic acid biosynthesis
-
-
PWY-735
jasmonoyl-amino acid conjugates biosynthesis I
-
-
PWY-6220
jasmonoyl-amino acid conjugates biosynthesis II
-
-
PWY-6233
jasmonoyl-L-isoleucine inactivation
-
-
PWY-7859
juniperonate biosynthesis
-
-
PWY-7619
justicidin B biosynthesis
-
-
PWY-6824
juvenile hormone III biosynthesis I
-
-
PWY-6575
juvenile hormone III biosynthesis II
-
-
PWY-6650
kaempferol gentiobioside biosynthesis
-
-
PWY-7143
kaempferol glycoside biosynthesis (Arabidopsis)
-
-
PWY-5320
kaempferol triglucoside biosynthesis
-
-
PWY-5348
kauralexin biosynthesis
-
-
PWY-6887
ketogenesis
-
-
PWY66-367
ketolysis
-
-
PWY66-368
L-alanine biosynthesis I
-
-
ALANINE-VALINESYN-PWY
L-alanine biosynthesis II
-
-
ALANINE-SYN2-PWY
L-alanine degradation II (to D-lactate)
-
-
ALACAT2-PWY
L-alanine degradation III
-
-
ALANINE-DEG3-PWY
L-alanine degradation IV
-
-
PWY1-2
L-alanine degradation V (oxidative Stickland reaction)
-
-
PWY-8189
L-alanine degradation VI (reductive Stickland reaction)
-
-
PWY-8188
L-arabinose degradation II
-
-
PWY-5515
L-arabinose degradation IV
-
-
PWY-7295
L-arginine biosynthesis I (via L-ornithine)
-
-
ARGSYN-PWY
L-arginine biosynthesis II (acetyl cycle)
-
-
ARGSYNBSUB-PWY
L-arginine biosynthesis III (via N-acetyl-L-citrulline)
-
-
PWY-5154
L-arginine biosynthesis IV (archaea)
-
-
PWY-7400
L-arginine degradation I (arginase pathway)
-
-
ARGASEDEG-PWY
L-arginine degradation II (AST pathway)
-
-
AST-PWY
L-arginine degradation III (arginine decarboxylase/agmatinase pathway)
-
-
PWY0-823
L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway)
-
-
ARGDEG-III-PWY
L-arginine degradation V (arginine deiminase pathway)
-
-
ARGDEGRAD-PWY
L-arginine degradation VI (arginase 2 pathway)
-
-
ARG-PRO-PWY
L-arginine degradation VII (arginase 3 pathway)
-
-
ARG-GLU-PWY
L-arginine degradation X (arginine monooxygenase pathway)
-
-
ARGDEG-V-PWY
L-arginine degradation XIII (reductive Stickland reaction)
-
-
PWY-8187
L-arginine degradation XIV (oxidative Stickland reaction)
-
-
PWY-6344
L-ascorbate biosynthesis I (plants, L-galactose pathway)
-
-
PWY-882
L-ascorbate biosynthesis II (plants, L-gulose pathway)
-
-
PWY4FS-11
L-ascorbate biosynthesis IV (animals, D-glucuronate pathway)
-
-
PWY3DJ-35471
L-ascorbate biosynthesis V (euglena, D-galacturonate pathway)
-
-
PWY-6415
L-ascorbate biosynthesis VI (plants, myo-inositol pathway)
-
-
PWY-8142
L-ascorbate biosynthesis VII (plants, D-galacturonate pathway)
-
-
PWY-8143
L-ascorbate biosynthesis VIII (engineered pathway)
-
-
PWY-7165
L-ascorbate degradation I (bacterial, anaerobic)
-
-
PWY0-301
L-ascorbate degradation II (bacterial, aerobic)
-
-
PWY-6961
L-ascorbate degradation III
-
-
PWY-6960
L-asparagine biosynthesis I
-
-
ASPARAGINE-BIOSYNTHESIS
L-asparagine biosynthesis II
-
-
ASPARAGINESYN-PWY
L-asparagine biosynthesis III (tRNA-dependent)
-
-
PWY490-4
L-asparagine degradation I
-
-
ASPARAGINE-DEG1-PWY
L-asparagine degradation III (mammalian)
-
-
ASPARAGINE-DEG1-PWY-1
L-aspartate biosynthesis
-
-
ASPARTATESYN-PWY
L-aspartate degradation I
-
-
ASPARTATE-DEG1-PWY
L-aspartate degradation II (aerobic)
-
-
PWY-8291
L-aspartate degradation III (anaerobic)
-
-
PWY-8294
L-carnitine degradation II
-
-
PWY-3641
L-citrulline biosynthesis
-
-
CITRULBIO-PWY
L-citrulline degradation
-
-
CITRULLINE-DEG-PWY
L-cysteine biosynthesis I
-
-
CYSTSYN-PWY
L-cysteine biosynthesis II (tRNA-dependent)
-
-
PWY-6308
L-cysteine biosynthesis III (from L-homocysteine)
-
-
HOMOCYSDEGR-PWY
L-cysteine biosynthesis IX (Trichomonas vaginalis)
-
-
PWY-8010
L-cysteine biosynthesis VI (reverse transsulfuration)
-
-
PWY-I9
L-cysteine biosynthesis VII (from S-sulfo-L-cysteine)
-
-
PWY-7870
L-cysteine biosynthesis VIII (Thermococcus kodakarensis)
-
-
PWY-8009
L-dopa and L-dopachrome biosynthesis
-
-
PWY-6481
L-dopa degradation II (bacterial)
-
-
PWY-8110
L-fucose degradation I
-
-
FUCCAT-PWY
L-glutamate biosynthesis I
-
-
GLUTSYN-PWY
L-glutamate biosynthesis II
-
-
GLUTAMATE-SYN2-PWY
L-glutamate biosynthesis III
-
-
GLUTSYNIII-PWY
L-glutamate biosynthesis IV
-
-
GLUGLNSYN-PWY
L-glutamate biosynthesis V
-
-
PWY-4341
L-glutamate degradation I
-
-
GLUTAMATE-DEG1-PWY
L-glutamate degradation II
-
-
GLUTDEG-PWY
L-glutamate degradation IX (via 4-aminobutanoate)
-
-
PWY0-1305
L-glutamate degradation V (via hydroxyglutarate)
-
-
P162-PWY
L-glutamate degradation VI (to pyruvate)
-
-
PWY-5087
L-glutamate degradation X
-
-
PWY-5766
L-glutamate degradation XI (reductive Stickland reaction)
-
-
PWY-8190
L-glutamine biosynthesis I
-
-
GLNSYN-PWY
L-glutamine degradation I
-
-
GLUTAMINDEG-PWY
L-glutamine degradation II
-
-
GLUTAMINEFUM-PWY
L-histidine biosynthesis
-
-
HISTSYN-PWY
L-histidine degradation I
-
-
HISDEG-PWY
L-histidine degradation II
-
-
PWY-5028
L-histidine degradation III
-
-
PWY-5030
L-histidine degradation V
-
-
PWY-5031
L-histidine degradation VI
-
-
HISHP-PWY
L-homoserine biosynthesis
-
-
HOMOSERSYN-PWY
L-isoleucine biosynthesis I (from threonine)
-
-
ILEUSYN-PWY
L-isoleucine biosynthesis II
-
-
PWY-5101
L-isoleucine biosynthesis III
-
-
PWY-5103
L-isoleucine biosynthesis IV
-
-
PWY-5104
L-isoleucine biosynthesis V
-
-
PWY-5108
L-isoleucine degradation I
-
-
ILEUDEG-PWY
L-isoleucine degradation II
-
-
PWY-5078
L-isoleucine degradation III (oxidative Stickland reaction)
-
-
PWY-8184
L-leucine biosynthesis
-
-
LEUSYN-PWY
L-leucine degradation I
-
-
LEU-DEG2-PWY
L-leucine degradation III
-
-
PWY-5076
L-leucine degradation IV (reductive Stickland reaction)
-
-
PWY-7767
L-leucine degradation V (oxidative Stickland reaction)
-
-
PWY-8185
L-lysine biosynthesis I
-
-
DAPLYSINESYN-PWY
L-lysine biosynthesis II
-
-
PWY-2941
L-lysine biosynthesis III
-
-
PWY-2942
L-lysine biosynthesis IV
-
-
LYSINE-AMINOAD-PWY
L-lysine biosynthesis V
-
-
PWY-3081
L-lysine biosynthesis VI
-
-
PWY-5097
L-lysine degradation I
-
-
PWY0-461
L-lysine degradation II (L-pipecolate pathway)
-
-
PWY66-425
L-lysine degradation IV
-
-
PWY-5280
L-lysine degradation VII
-
-
PWY-5311
L-lysine degradation X
-
-
PWY-6328
L-lysine degradation XI
-
-
LYSINE-DEG1-PWY
L-lysine fermentation to acetate and butanoate
-
-
P163-PWY
L-malate degradation II
-
-
PWY-7686
L-methionine biosynthesis I
-
-
HOMOSER-METSYN-PWY
L-methionine biosynthesis II
-
-
PWY-702
L-methionine biosynthesis III
-
-
HSERMETANA-PWY
L-methionine biosynthesis IV
-
-
PWY-7977
L-methionine degradation I (to L-homocysteine)
-
-
METHIONINE-DEG1-PWY
L-methionine degradation III
-
-
PWY-5082
L-methionine salvage cycle II (plants)
-
-
PWY-7270
L-methionine salvage from L-homocysteine
-
-
ADENOSYLHOMOCYSCAT-PWY
L-Ndelta-acetylornithine biosynthesis
-
-
PWY-6922
L-nicotianamine biosynthesis
-
-
PWY-5957
L-ornithine biosynthesis I
-
-
GLUTORN-PWY
L-ornithine biosynthesis II
-
-
ARGININE-SYN4-PWY
L-ornithine degradation I (L-proline biosynthesis)
-
-
ORN-AMINOPENTANOATE-CAT-PWY
L-phenylalanine biosynthesis I
-
-
PHESYN
L-phenylalanine biosynthesis II
-
-
PWY-3462
L-phenylalanine biosynthesis III (cytosolic, plants)
-
-
PWY-7432
L-phenylalanine degradation I (aerobic)
-
-
PHENYLALANINE-DEG1-PWY
L-phenylalanine degradation II (anaerobic)
-
-
ANAPHENOXI-PWY
L-phenylalanine degradation III
-
-
PWY-5079
L-phenylalanine degradation IV (mammalian, via side chain)
-
-
PWY-6318
L-phenylalanine degradation V
-
-
PWY-7158
L-phenylalanine degradation VI (reductive Stickland reaction)
-
-
PWY-8014
L-proline biosynthesis I (from L-glutamate)
-
-
PROSYN-PWY
L-proline biosynthesis II (from arginine)
-
-
PWY-4981
L-proline biosynthesis III (from L-ornithine)
-
-
PWY-3341
L-proline degradation I
-
-
PROUT-PWY
L-rhamnose degradation I
-
-
RHAMCAT-PWY
L-selenocysteine biosynthesis I (bacteria)
-
-
PWY0-901
L-selenocysteine biosynthesis II (archaea and eukaryotes)
-
-
PWY-6281
L-serine biosynthesis I
-
-
SERSYN-PWY
L-serine biosynthesis II
-
-
PWY-8011
L-sorbose degradation
-
-
P302-PWY
L-threonine biosynthesis
-
-
HOMOSER-THRESYN-PWY
L-threonine degradation I
-
-
PWY-5437
L-threonine degradation II
-
-
THREONINE-DEG2-PWY
L-threonine degradation III (to methylglyoxal)
-
-
THRDLCTCAT-PWY
L-threonine degradation V
-
-
PWY66-428
L-tryptophan biosynthesis
-
-
TRPSYN-PWY
L-tryptophan degradation I (via anthranilate)
-
-
TRPCAT-PWY
L-tryptophan degradation IV (via indole-3-lactate)
-
-
TRPKYNCAT-PWY
L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
-
-
PWY-5651
L-tryptophan degradation V (side chain pathway)
-
-
PWY-3162
L-tryptophan degradation VI (via tryptamine)
-
-
PWY-3181
L-tryptophan degradation VIII (to tryptophol)
-
-
PWY-5081
L-tryptophan degradation X (mammalian, via tryptamine)
-
-
PWY-6307
L-tryptophan degradation XI (mammalian, via kynurenine)
-
-
PWY-6309
L-tryptophan degradation XIII (reductive Stickland reaction)
-
-
PWY-8017
L-tyrosine biosynthesis I
-
-
TYRSYN
L-tyrosine biosynthesis II
-
-
PWY-3461
L-tyrosine biosynthesis III
-
-
PWY-6120
L-tyrosine biosynthesis IV
-
-
PWY-6134
L-tyrosine degradation I
-
-
TYRFUMCAT-PWY
L-tyrosine degradation II
-
-
PWY-5151
L-tyrosine degradation III
-
-
PWY3O-4108
L-tyrosine degradation IV (to 4-methylphenol)
-
-
PWY-7514
L-tyrosine degradation V (reductive Stickland reaction)
-
-
PWY-8016
L-valine biosynthesis
-
-
VALSYN-PWY
L-valine degradation I
-
-
VALDEG-PWY
L-valine degradation II
-
-
PWY-5057
L-valine degradation III (oxidative Stickland reaction)
-
-
PWY-8183
lacinilene C biosynthesis
-
-
PWY-5828
lactate biosynthesis (archaea)
-
-
PWY-5197
lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales)
-
-
PWY-8377
lacto-series glycosphingolipids biosynthesis
-
-
PWY-7839
lactose degradation III
-
-
BGALACT-PWY
lactucaxanthin biosynthesis
-
-
PWY-5175
lanosterol biosynthesis
-
-
PWY-6132
leucodelphinidin biosynthesis
-
-
PWY-5152
leucopelargonidin and leucocyanidin biosynthesis
-
-
PWY1F-823
leukotriene biosynthesis
-
-
PWY66-375
levopimaric acid biosynthesis
-
-
PWY-5412
limonene degradation IV (anaerobic)
-
-
PWY-8029
linalool biosynthesis I
-
-
PWY-7182
linamarin degradation
-
-
PWY-3121
linoleate biosynthesis I (plants)
-
-
PWY-5995
linoleate biosynthesis II (animals)
-
-
PWY-6001
linoleate metabolites biosynthesis
-
-
PWY-8395
linustatin bioactivation
-
-
PWY-7091
lipid A-core biosynthesis (E. coli K-12)
-
-
LIPA-CORESYN-PWY
lipid IVA biosynthesis (2,3-diamino-2,3-dideoxy-D-glucopyranose-containing)
-
-
PWY2B4Q-4
lipid IVA biosynthesis (E. coli)
-
-
NAGLIPASYN-PWY
lipid IVA biosynthesis (generic)
-
-
PWY-8283
lipid IVA biosynthesis (H. pylori)
-
-
PWYI-14
lipid IVA biosynthesis (P. gingivalis)
-
-
PWY-8245
lipid IVA biosynthesis (P. putida)
-
-
PWY-8073
lipid IVA biosynthesis (Vibrio cholerae serogroup O1 El Tor)
-
-
PWY2G6Z-2
lipoate biosynthesis and incorporation II
-
-
PWY0-1275
lipoxin biosynthesis
-
-
PWY66-392
long chain fatty acid ester synthesis (engineered)
-
-
PWY-6873
long-chain fatty acid activation
-
-
PWY-5143
lotaustralin degradation
-
-
PWY-6002
lupanine biosynthesis
-
-
PWY-5468
lupulone and humulone biosynthesis
-
-
PWY-5132
lutein biosynthesis
-
-
PWY-5947
luteolin biosynthesis
-
-
PWY-5060
luteolin glycosides biosynthesis
-
-
PWY-6239
luteolin triglucuronide degradation
-
-
PWY-7445
lychnose and isolychnose biosynthesis
-
-
PWY-6524
maackiain conjugates interconversion
-
-
PWY-2701
malate/L-aspartate shuttle pathway
-
-
MALATE-ASPARTATE-SHUTTLE-PWY
malbrancheamide biosynthesis
-
-
PWY-8345
manganese oxidation I
-
-
PWY-6591
mangrove triterpenoid biosynthesis
-
-
PWY-6109
mannitol biosynthesis
-
-
PWY-3881
mannitol cycle
-
-
PWY-6531
mannitol degradation II
-
-
PWY-3861
maresin biosynthesis
-
-
PWY-8356
matairesinol biosynthesis
-
-
PWY-5466
medicarpin conjugates interconversion
-
-
PWY-2561
melatonin degradation I
-
-
PWY-6398
melatonin degradation II
-
-
PWY-6399
melibiose degradation
-
-
PWY0-1301
menaquinol-10 biosynthesis
-
-
PWY-5890
menaquinol-11 biosynthesis
-
-
PWY-5891
menaquinol-12 biosynthesis
-
-
PWY-5892
menaquinol-13 biosynthesis
-
-
PWY-5895
menaquinol-4 biosynthesis I
-
-
PWY-7996
menaquinol-6 biosynthesis
-
-
PWY-5849
menaquinol-7 biosynthesis
-
-
PWY-5839
menaquinol-8 biosynthesis
-
-
MENAQUINONESYN-PWY
menaquinol-9 biosynthesis
-
-
PWY-5844
menthol biosynthesis
-
-
PWY-3061
methane oxidation to methanol I
-
-
PWY-1641
methane oxidation to methanol II
-
-
PWY-6742
Methanobacterium thermoautotrophicum biosynthetic metabolism
-
-
PWY-6146
methanofuran biosynthesis
-
-
PWY-5254
methanogenesis from acetate
-
-
METH-ACETATE-PWY
methanogenesis from H2 and CO2
-
-
METHANOGENESIS-PWY
methanogenesis from methanol
-
-
CO2FORM-PWY
methanogenesis from methoxylated aromatic compounds
-
-
PWY-8304
methanol oxidation to carbon dioxide
-
-
PWY-7616
methanol oxidation to formaldehyde II
-
-
PWY-6510
methanol oxidation to formaldehyde IV
-
-
PWY-5506
methiin metabolism
-
-
PWY-7614
methoxylated aromatic compound degradation II
-
-
PWY-8305
methyl indole-3-acetate interconversion
-
-
PWY-6303
methyl ketone biosynthesis (engineered)
-
-
PWY-7007
methyl parathion degradation
-
-
PWY-5489
methyl phomopsenoate biosynthesis
-
-
PWY-7721
methyl tert-butyl ether degradation
-
-
PWY-7779
methyl-coenzyme M oxidation to CO2
-
-
PWY-5209
methyl-coenzyme M reduction to methane
-
-
METHFORM-PWY
methylamine degradation I
-
-
PWY-6967
methylaspartate cycle
methylerythritol phosphate pathway I
-
-
NONMEVIPP-PWY
methylerythritol phosphate pathway II
-
-
PWY-7560
methylglyoxal degradation I
-
-
PWY-5386
methylglyoxal degradation III
-
-
PWY-5453
methylglyoxal degradation VI
-
-
MGLDLCTANA-PWY
methylglyoxal degradation VIII
-
-
PWY-5386-1
methylhalides biosynthesis (plants)
-
-
PWY-6730
methylquercetin biosynthesis
-
-
PWY-6064
methylsalicylate biosynthesis
-
-
PWY18C3-22
methylsalicylate degradation
-
-
PWY-6184, PWY18C3-24
mevalonate degradation
-
-
PWY-5074
mevalonate pathway I (eukaryotes and bacteria)
-
-
PWY-922
mevalonate pathway II (haloarchaea)
-
-
PWY-6174
mevalonate pathway III (Thermoplasma)
-
-
PWY-7524
mevalonate pathway IV (archaea)
-
-
PWY-8125
mineralocorticoid biosynthesis
-
-
PWY66-382
mitochondrial L-carnitine shuttle
-
-
PWY-6111
mitochondrial NADPH production (yeast)
-
-
PWY-7269
mixed acid fermentation
-
-
FERMENTATION-PWY
molybdenum cofactor biosynthesis
molybdopterin biosynthesis
-
-
PWY-6823
momilactone A biosynthesis
-
-
PWY-7477
mono-trans, poly-cis decaprenyl phosphate biosynthesis
-
-
PWY-6383
monoterpene biosynthesis
-
-
PWY-3041
mRNA capping I
-
-
PWY-7375
mRNA capping II
-
-
PWY-7379
mucin core 1 and core 2 O-glycosylation
-
-
PWY-7433
mucin core 3 and core 4 O-glycosylation
-
-
PWY-7435
mupirocin biosynthesis
-
-
PWY-8012
mycobacterial sulfolipid biosynthesis
-
-
PWY-7746
mycobactin biosynthesis
-
-
PWY185E-1
mycolate biosynthesis
-
-
PWYG-321
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
-
-
PWY-6397
mycothiol biosynthesis
-
-
PWY1G-0
myo-inositol biosynthesis
myo-inositol degradation I
-
-
P562-PWY
myricetin gentiobioside biosynthesis
-
-
PWY-7140
myxol-2' fucoside biosynthesis
-
-
PWY-6279
N-3-oxalyl-L-2,3-diaminopropanoate biosynthesis
-
-
PWY-8071
N-acetyl-D-galactosamine degradation
-
-
PWY-7077
N-acetylglucosamine degradation I
-
-
GLUAMCAT-PWY
NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
-
-
PWY-5653
NAD biosynthesis from nicotinamide
-
-
NAD-BIOSYNTHESIS-III
NAD de novo biosynthesis I
-
-
PYRIDNUCSYN-PWY
NAD de novo biosynthesis III
-
-
PWY-8352
NAD de novo biosynthesis IV (anaerobic)
-
-
PWY-8277
NAD phosphorylation and dephosphorylation
-
-
NADPHOS-DEPHOS-PWY
NAD phosphorylation and transhydrogenation
-
-
NADPHOS-DEPHOS-PWY-1
NAD salvage (plants)
-
-
PWY-5381
NAD salvage pathway I (PNC VI cycle)
-
-
PYRIDNUCSAL-PWY
NAD salvage pathway II (PNC IV cycle)
-
-
PWY-7761
NAD salvage pathway III (to nicotinamide riboside)
-
-
NAD-BIOSYNTHESIS-II
NAD salvage pathway V (PNC V cycle)
-
-
PWY3O-4107
NAD(P)/NADPH interconversion
-
-
PWY-5083
NADH to cytochrome bd oxidase electron transfer I
-
-
PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
-
-
PWY0-1335
NADH to fumarate electron transfer
-
-
PWY0-1336
NADP biosynthesis
-
-
PWY-8148
NADPH to cytochrome c oxidase via plastocyanin
-
-
PWY-8271
naphthalene degradation (aerobic)
-
-
PWY-5427
naringenin biosynthesis (engineered)
-
-
PWY-7397
naringenin C-glucosylation
-
-
PWY-6602
naringenin glycoside biosynthesis
-
-
PWY-5094
neoabietic acid biosynthesis
-
-
PWY-5413
neolacto-series glycosphingolipids biosynthesis
-
-
PWY-7841
neolinustatin bioactivation
-
-
PWY-7092
nepetalactone biosynthesis
-
-
PWY-8069
nicotine biosynthesis
-
-
PWY-5316
nicotine degradation I (pyridine pathway)
-
-
P181-PWY
nicotine degradation IV
-
-
PWY66-201
nicotine degradation V
-
-
PWY66-221
nitrate reduction I (denitrification)
-
-
DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
-
-
PWY-381
nitrate reduction IX (dissimilatory)
-
-
PWY0-1581
nitrate reduction V (assimilatory)
-
-
PWY-5675
nitrate reduction VI (assimilatory)
-
-
PWY490-3
nitrate reduction VII (denitrification)
-
-
PWY-6748
nitrate reduction X (dissimilatory, periplasmic)
-
-
PWY0-1584
nitric oxide biosynthesis II (mammals)
-
-
PWY-4983
nitrifier denitrification
-
-
PWY-7084
nitrite-dependent anaerobic methane oxidation
-
-
PWY-6523
nitroethane degradation
-
-
PWY-5355
nitrogen fixation I (ferredoxin)
-
-
N2FIX-PWY
nitrogen fixation II (flavodoxin)
-
-
PWY-7576
nitrogen remobilization from senescing leaves
-
-
PWY-6549
nocardicin A biosynthesis
-
-
PWY-7797
nonaprenyl diphosphate biosynthesis I
-
-
PWY-5805
nonaprenyl diphosphate biosynthesis II
-
-
PWY-6520
noradrenaline and adrenaline degradation
-
-
PWY-6342
norspermidine biosynthesis
-
-
PWY-6562
nucleoside and nucleotide degradation (archaea)
-
-
PWY-5532
O-antigen building blocks biosynthesis (E. coli)
-
-
OANTIGEN-PWY
o-diquinones biosynthesis
-
-
PWY-6752
octane oxidation
octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
-
-
PWY-7388
octaprenyl diphosphate biosynthesis
-
-
PWY-5783
octopamine biosynthesis
-
-
PWY-7297
odd iso-branched-chain fatty acid biosynthesis
-
-
PWY-8174
okenone biosynthesis
-
-
PWY-7591
oleandomycin activation/inactivation
-
-
PWY-6972
oleanolate biosynthesis
-
-
PWY-7069
oleate beta-oxidation
-
-
PWY0-1337
oleate beta-oxidation (isomerase-dependent, yeast)
-
-
PWY-7291
oleate beta-oxidation (reductase-dependent, yeast)
-
-
PWY-7307
oleate beta-oxidation (thioesterase-dependent, yeast)
-
-
PWY-7292
oleate biosynthesis I (plants)
-
-
PWY-5147
oleate biosynthesis II (animals and fungi)
-
-
PWY-5996
oleate biosynthesis III (cyanobacteria)
-
-
PWY-7587
oleate biosynthesis IV (anaerobic)
-
-
PWY-7664
oleoresin monoterpene volatiles biosynthesis
-
-
PWY-5423
oleoresin sesquiterpene volatiles biosynthesis
-
-
PWY-5425
ophiobolin F biosynthesis
-
-
PWY-7720
ophthalmate biosynthesis
-
-
PWY-8043
orientin and isoorientin biosynthesis I
-
-
PWY-7188
oryzalexin D and E biosynthesis
-
-
PWY-7478
oryzalide A biosynthesis
-
-
PWY-7481
oxalate biosynthesis
oxalate degradation III
-
-
PWY-6696
oxalate degradation IV
-
-
PWY-6697
oxalate degradation V
-
-
PWY-6698
oxalate degradation VI
-
-
PWY-7985
p-HBAD biosynthesis
-
-
PWY-7745
palmitate biosynthesis I (type I fatty acid synthase)
-
-
PWY-5994
palmitate biosynthesis II (type II fatty acid synthase)
-
-
PWY-5971
palmitate biosynthesis III
-
-
PWY-8279
palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
-
-
PWY-6282
palmitoleate biosynthesis II (plants and bacteria)
-
-
PWY-5366
palmitoleate biosynthesis III (cyanobacteria)
-
-
PWY-7589
palmitoleate biosynthesis IV (fungi and animals)
-
-
PWY3O-1801
palmitoyl ethanolamide biosynthesis
-
-
PWY-8055
palustric acid biosynthesis
-
-
PWY-5414
paraoxon degradation
-
-
PWY-5490
parathion degradation
-
-
PARATHION-DEGRADATION-PWY
parkeol biosynthesis
-
-
PWY-8027
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
paspaline biosynthesis
-
-
PWY-7492
pectin degradation I
-
-
PWY-7246
pectin degradation II
-
-
PWY-7248
pederin biosynthesis
-
-
PWY-8049
pentachlorophenol degradation
-
-
PCPDEG-PWY
pentacyclic triterpene biosynthesis
-
-
PWY-7251
pentose phosphate pathway (non-oxidative branch) I
-
-
NONOXIPENT-PWY
pentose phosphate pathway (non-oxidative branch) II
-
-
PWY-8178
pentose phosphate pathway (oxidative branch) I
-
-
OXIDATIVEPENT-PWY
pentose phosphate pathway (partial)
-
-
P21-PWY
peptido-conjugates in tissue regeneration biosynthesis
-
-
PWY-8355
peptidoglycan biosynthesis II (staphylococci)
-
-
PWY-5265
peptidoglycan biosynthesis IV (Enterococcus faecium)
-
-
PWY-6471
peptidoglycan maturation (meso-diaminopimelate containing)
-
-
PWY0-1586
peptidoglycan recycling I
-
-
PWY0-1261
peptidoglycan recycling II
-
-
PWY-7883
perillyl aldehyde biosynthesis
-
-
PWY-6436
periplasmic disulfide bond reduction
-
-
PWY0-1600
petrobactin biosynthesis
-
-
PWY-6289
petroselinate biosynthesis
-
-
PWY-5367
phaselate biosynthesis
-
-
PWY-6320
phenolic malonylglucosides biosynthesis
-
-
PWY-6930
phenolphthiocerol biosynthesis
-
-
PWY-7742
phenylacetate degradation I (aerobic)
-
-
PWY0-321
phenylethanol biosynthesis
-
-
PWY-5751
phenylethylamine degradation I
-
-
2PHENDEG-PWY
phenylmercury acetate degradation
phenylpropanoid biosynthesis
-
-
PWY-361
phenylpropanoid biosynthesis, initial reactions
-
-
PWY1F-467
phenylpropanoids methylation (ice plant)
-
-
PWY-7498
pheomelanin biosynthesis
-
-
PWY-7917
phloridzin biosynthesis
-
-
PWY-6515
phosalacine biosynthesis
-
-
PWY-7769
phosphate acquisition
-
-
PWY-6348
phosphatidate biosynthesis (yeast)
-
-
PWY-7411
phosphatidate metabolism, as a signaling molecule
-
-
PWY-7039
phosphatidylcholine acyl editing
-
-
PWY-6803
phosphatidylcholine biosynthesis II
-
-
PWY4FS-2
phosphatidylcholine biosynthesis III
-
-
PWY4FS-3
phosphatidylcholine biosynthesis IV
-
-
PWY4FS-4
phosphatidylcholine biosynthesis VI
-
-
PWY-6826
phosphatidylcholine resynthesis via glycerophosphocholine
-
-
PWY-7367
phosphatidylethanolamine biosynthesis II
-
-
PWY4FS-6
phosphatidylinositol biosynthesis I (bacteria)
-
-
PWY-6580
phosphatidylserine and phosphatidylethanolamine biosynthesis I
-
-
PWY-5669
phosphinothricin tripeptide biosynthesis
-
-
PWY-6322
phospholipases
-
-
LIPASYN-PWY
phospholipid desaturation
-
-
PWY-762
phospholipid remodeling (phosphatidate, yeast)
-
-
PWY-7417
phospholipid remodeling (phosphatidylcholine, yeast)
-
-
PWY-7416
phospholipid remodeling (phosphatidylethanolamine, yeast)
-
-
PWY-7409
phosphopantothenate biosynthesis I
-
-
PANTO-PWY
photorespiration I
-
-
PWY-181
photorespiration II
-
-
PWY-8362
photorespiration III
-
-
PWY-8363
photosynthesis light reactions
-
-
PWY-101
photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
-
-
PWY-7218
phytate degradation I
-
-
PWY-4702
phytocassanes biosynthesis, shared reactions
-
-
PWY-7484
phytochelatins biosynthesis
-
-
PWY-6745
phytochromobilin biosynthesis
-
-
PWY-7170
phytol degradation
-
-
PWY66-389
phytosterol biosynthesis (plants)
-
-
PWY-2541
pinitol biosynthesis I
-
-
PWY-6738
pinobanksin biosynthesis
-
-
PWY-5059
pinocembrin C-glucosylation
-
-
PWY-7189
pinoresinol degradation
-
-
PWY-7982
plasmalogen biosynthesis I (aerobic)
-
-
PWY-7782
plasmalogen degradation
-
-
PWY-7783
plastoquinol-9 biosynthesis I
-
-
PWY-1581
plastoquinol-9 biosynthesis II
-
-
PWY-6978
platensimycin biosynthesis
-
-
PWY-8179
plaunotol biosynthesis
-
-
PWY-6691
poly-hydroxy fatty acids biosynthesis
-
-
PWY-6710
polybrominated dihydroxylated diphenyl ethers biosynthesis
-
-
PWY-7934
polybrominated phenols biosynthesis
-
-
PWY-7929
polyhydroxybutanoate biosynthesis
-
-
PWY1-3
polyhydroxydecanoate biosynthesis
-
-
PWY-6657
polymethylated myricetin biosynthesis (tomato)
-
-
PWY-7160
polymethylated quercetin biosynthesis
-
-
PWY-7161
polymethylated quercetin glucoside biosynthesis I - quercetin series (Chrysosplenium)
-
-
PWY-7150
polyphosphate metabolism
-
-
PWY-8138
ppGpp metabolism
-
-
PPGPPMET-PWY
preQ0 biosynthesis
-
-
PWY-6703
proanthocyanidins biosynthesis from flavanols
-
-
PWY-641
procollagen hydroxylation and glycosylation
-
-
PWY-7894
proline to cytochrome bo oxidase electron transfer
-
-
PWY0-1544
propanethial S-oxide biosynthesis
-
-
PWY-5707
propanoate fermentation to 2-methylbutanoate
-
-
PWY-5109
propanoyl-CoA degradation II
-
-
PWY-7574
protectin biosynthesis
-
-
PWY-8357
protective electron sinks in the thylakoid membrane (PSII to PTOX)
-
-
PWY1YI0-7
protein N-glycosylation initial phase (eukaryotic)
-
-
MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS
protein N-glycosylation processing phase (endoplasmic reticulum, yeast)
-
-
PWY-7918
protein N-glycosylation processing phase (plants and animals)
-
-
PWY-7919
protein O-mannosylation I (yeast)
-
-
PWY-7921
protein O-mannosylation II (mammals, core M1 and core M2)
-
-
PWY-7922
protein O-mannosylation III (mammals, core M3)
-
-
PWY-7979
protein O-[N-acetyl]-glucosylation
-
-
PWY-7437
protein S-nitrosylation and denitrosylation
-
-
PWY-7798
protein SAMPylation and SAMP-mediated thiolation
-
-
PWY-7887
protein ubiquitination
-
-
PWY-7511
protocatechuate degradation I (meta-cleavage pathway)
-
-
P184-PWY
pseudouridine degradation
-
-
PWY-6019
psilocybin biosynthesis
-
-
PWY-7936
purine deoxyribonucleosides degradation I
-
-
PWY-7179
purine deoxyribonucleosides degradation II
-
-
PWY-7179-1
purine deoxyribonucleosides salvage
-
-
PWY-7224
purine nucleobases degradation I (anaerobic)
-
-
P164-PWY
purine nucleobases degradation II (anaerobic)
-
-
PWY-5497
purine ribonucleosides degradation
-
-
PWY0-1296
putrescine biosynthesis I
-
-
PWY-40
putrescine biosynthesis II
-
-
PWY-43
putrescine biosynthesis III
-
-
PWY-46
putrescine degradation I
-
-
PUTDEG-PWY
putrescine degradation III
-
-
PWY-0
putrescine degradation IV
-
-
PWY-2
putrescine degradation V
-
-
PWY-3
pyridoxal 5'-phosphate biosynthesis I
-
-
PYRIDOXSYN-PWY
pyridoxal 5'-phosphate salvage I
-
-
PLPSAL-PWY
pyridoxal 5'-phosphate salvage II (plants)
-
-
PWY-7204
pyrimidine deoxyribonucleosides degradation
-
-
PWY-7181
pyrimidine deoxyribonucleosides salvage
-
-
PWY-7199
pyrimidine deoxyribonucleotide phosphorylation
-
-
PWY-7197
pyrimidine deoxyribonucleotides biosynthesis from CTP
-
-
PWY-7210
pyrimidine deoxyribonucleotides de novo biosynthesis I
-
-
PWY-7184
pyrimidine deoxyribonucleotides de novo biosynthesis II
-
-
PWY-7187
pyrimidine deoxyribonucleotides de novo biosynthesis III
-
-
PWY-6545
pyrimidine deoxyribonucleotides de novo biosynthesis IV
-
-
PWY-7198
pyrimidine deoxyribonucleotides dephosphorylation
-
-
PWY-7206
pyrimidine nucleobases salvage II
-
-
PWY-7194
pyrimidine ribonucleosides degradation
-
-
PWY0-1295
pyrimidine ribonucleosides salvage I
-
-
PWY-7193
pyrimidine ribonucleosides salvage II
-
-
PWY-6556
pyrimidine ribonucleosides salvage III
-
-
PWY-7195
pyruvate decarboxylation to acetyl CoA I
-
-
PYRUVDEHYD-PWY
pyruvate decarboxylation to acetyl CoA II
-
-
PWY-6970
pyruvate fermentation to (R)-acetoin I
-
-
PWY-5938
pyruvate fermentation to (R)-acetoin II
-
-
PWY-5939
pyruvate fermentation to (R)-lactate
-
-
PWY-8274
pyruvate fermentation to (S)-acetoin
-
-
PWY-6389
pyruvate fermentation to (S)-lactate
-
-
PWY-5481
pyruvate fermentation to acetate II
-
-
PWY-5482
pyruvate fermentation to acetate IV
-
-
PWY-5485
pyruvate fermentation to acetate V
-
-
PWY-5537
pyruvate fermentation to acetate VIII
-
-
PWY-5768
pyruvate fermentation to acetoin III
-
-
PWY3O-440
pyruvate fermentation to acetone
-
-
PWY-6588
pyruvate fermentation to butanoate
-
-
CENTFERM-PWY
pyruvate fermentation to butanol I
-
-
PWY-6583
pyruvate fermentation to butanol II (engineered)
-
-
PWY-6883
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
-
PWY-5486
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to hexanol (engineered)
-
-
PWY-6863
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
pyruvate fermentation to opines
-
-
PWY-7351
pyruvate fermentation to propanoate I
-
-
P108-PWY
quercetin gentiotetraside biosynthesis
-
-
PWY-7137
quercetin glucoside biosynthesis (Allium)
-
-
PWY-7129
quercetin glycoside biosynthesis (Arabidopsis)
-
-
PWY-5321
quercetin sulfate biosynthesis
-
-
PWY-6199
quercetin triglucoside biosynthesis
-
-
PWY-7173
quinate degradation I
-
-
QUINATEDEG-PWY
quinate degradation II
-
-
PWY-6416
quinoxaline-2-carboxylate biosynthesis
-
-
PWY-7734
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
-
-
CODH-PWY
reductive acetyl coenzyme A pathway II (autotrophic methanogens)
-
-
PWY-7784
reductive glycine pathway of autotrophic CO2 fixation
-
-
PWY-8303
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
resolvin D biosynthesis
-
-
PWY66-397
resveratrol biosynthesis
-
-
PWY-84
retinoate biosynthesis I
-
-
PWY-6872
retinol biosynthesis
-
-
PWY-6857
rose anthocyanin biosynthesis II (via cyanidin 3-O-beta-D-glucoside)
-
-
PWY-7262
rosmarinic acid biosynthesis I
-
-
PWY-5048
rosmarinic acid biosynthesis II
-
-
PWY-5049
Rubisco shunt
-
-
PWY-5723
rutin biosynthesis
-
-
PWY-5390
rutin degradation (plants)
-
-
PWY-7134
S-(6-hydroxy-4-methylhexan-4-yl)-L-cysteinylglycine degradation
-
-
PWY-8302
S-adenosyl-L-methionine biosynthesis
-
-
SAM-PWY
S-adenosyl-L-methionine salvage I
-
-
PWY-6151
S-adenosyl-L-methionine salvage II
-
-
PWY-5041
S-methyl-5'-thioadenosine degradation I
-
-
PWY-6754
S-methyl-5'-thioadenosine degradation IV
-
-
PWY0-1391
S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation I
-
-
PWY-4361
S-methyl-L-methionine cycle
-
-
PWY-5441
saframycin A biosynthesis
-
-
PWY-7671
sakuranetin biosynthesis
-
-
PWY-5116
salicylate biosynthesis I
-
-
PWY-6406
salicylate biosynthesis II
-
-
PWY-8321
salicylate degradation I
-
-
PWY-6183
salidroside biosynthesis
-
-
PWY-6802
salinosporamide A biosynthesis
-
-
PWY-6627
Salmonella enterica serotype O:13 O antigen biosynthesis
-
-
PWY-8230
salvigenin biosynthesis
-
-
PWY-7325
santalene biosynthesis II
-
-
PWY-6836
saponin biosynthesis II
-
-
PWY-5756
sciadonate biosynthesis
-
-
PWY-6598
scopoletin biosynthesis
-
-
PWY-6792
secologanin and strictosidine biosynthesis
-
-
PWY-5290
sedoheptulose bisphosphate bypass
-
-
PWY0-1517
selenate reduction
-
-
PWY-6932
seleno-amino acid biosynthesis (plants)
-
-
PWY-6936
seleno-amino acid detoxification and volatilization I
-
-
PWY-6931
seleno-amino acid detoxification and volatilization II
-
-
PWY-6935
seleno-amino acid detoxification and volatilization III
-
-
PWY-6933
serine racemization
-
-
PWY-8140
serotonin and melatonin biosynthesis
-
-
PWY-6030
serotonin degradation
-
-
PWY-6313
sesamin biosynthesis
-
-
PWY-5469
sitosterol degradation to androstenedione
-
-
PWY-6948
solasodine glycosylation
-
-
PWY18C3-4
sophorolipid biosynthesis
-
-
SOPHOROSYLOXYDOCOSANOATE-SYN-PWY
sophorosyloxydocosanoate deacetylation
-
-
SOPHOROSYLOXYDOCOSANOATE-DEG-PWY
sorbitol biosynthesis II
-
-
PWY-5530
sorgoleone biosynthesis
-
-
PWY-5987
soybean saponin I biosynthesis
-
-
PWY-5203
spermidine biosynthesis I
-
-
BSUBPOLYAMSYN-PWY
spermidine biosynthesis II
-
-
PWY-6559
spermidine biosynthesis III
-
-
PWY-6834
spermine and spermidine degradation I
-
-
PWY-6117
spermine and spermidine degradation II
-
-
PWY-6440
spermine and spermidine degradation III
-
-
PWY-6441
spermine biosynthesis
-
-
ARGSPECAT-PWY
sphingolipid biosynthesis (plants)
-
-
PWY-5129
sphingolipid biosynthesis (yeast)
-
-
SPHINGOLIPID-SYN-PWY
sphingosine and sphingosine-1-phosphate metabolism
-
-
PWY3DJ-11470
Spodoptera littoralis pheromone biosynthesis
-
-
PWY-7656
spongiadioxin C biosynthesis
-
-
PWY-7935
sporopollenin precursors biosynthesis
-
-
PWY-6733
stachyose biosynthesis
-
-
PWY-5337
stachyose degradation
-
-
PWY-6527
starch biosynthesis
-
-
PWY-622
starch degradation I
-
-
PWY-842
starch degradation II
-
-
PWY-6724
starch degradation III
-
-
PWY-6731
starch degradation IV
-
-
PWY-6735
starch degradation V
-
-
PWY-6737
stearate biosynthesis I (animals)
-
-
PWY-5972
stearate biosynthesis II (bacteria and plants)
-
-
PWY-5989
stearate biosynthesis III (fungi)
-
-
PWY3O-355
stearate biosynthesis IV
-
-
PWY-8280
stellariose and mediose biosynthesis
-
-
PWY-6525
stellatic acid biosynthesis
-
-
PWY-7736
sterol biosynthesis (methylotrophs)
-
-
PWY-8026
sterol:steryl ester interconversion (yeast)
-
-
PWY-7424
stigma estolide biosynthesis
-
-
PWY-6453
streptomycin biosynthesis
-
-
PWY-5940
streptorubin B biosynthesis
-
-
PWY1A0-6120
suberin monomers biosynthesis
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome bd oxidase electron transfer
-
-
PWY0-1353
succinate to cytochrome bo oxidase electron transfer
-
-
PWY0-1329
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
succinate to plastoquinol oxidase
-
-
PWY1YI0-8
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
sucrose biosynthesis II
-
-
PWY-7238
sucrose biosynthesis III
-
-
PWY-7347
sucrose degradation I (sucrose phosphotransferase)
-
-
SUCUTIL-PWY
sucrose degradation II (sucrose synthase)
-
-
PWY-3801
sucrose degradation III (sucrose invertase)
-
-
PWY-621
sucrose degradation IV (sucrose phosphorylase)
-
-
PWY-5384
sucrose degradation V (sucrose alpha-glucosidase)
-
-
PWY66-373
sucrose degradation VII (sucrose 3-dehydrogenase)
-
-
SUCROSEUTIL2-PWY
sulfate activation for sulfonation
-
-
PWY-5340
sulfide oxidation I (to sulfur globules)
-
-
P222-PWY
sulfide oxidation III (to sulfite)
-
-
PWY-5285
sulfide oxidation IV (mitochondria)
-
-
PWY-7927
sulfite oxidation II
-
-
PWY-5279
sulfite oxidation III
-
-
PWY-5278
sulfite oxidation IV (sulfite oxidase)
-
-
PWY-5326
sulfolactate degradation III
-
-
PWY-6638
sulfoquinovosyl diacylglycerol biosynthesis
-
-
PWYQT-4427
sulfur reduction I
-
-
PWY-5332
sulfur reduction II (via polysulfide)
-
-
PWY-5364
sulfur volatiles biosynthesis
-
-
PWY-6736
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of 5-aminoimidazole ribonucleotide biosynthesis
-
-
PWY-6277
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside)
-
-
PWY-5313
superpathway of C28 brassinosteroid biosynthesis
-
-
PWY-6544
superpathway of fatty acid biosynthesis initiation
-
-
FASYN-INITIAL-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of glycolysis and the Entner-Doudoroff pathway
-
-
GLYCOLYSIS-E-D
superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass
-
-
GLYCOLYSIS-TCA-GLYOX-BYPASS
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
superpathway of indole-3-acetate conjugate biosynthesis
-
-
PWY-1782
superpathway of L-aspartate and L-asparagine biosynthesis
-
-
ASPASN-PWY
superpathway of methylsalicylate metabolism
-
-
PWY18C3-25
superpathway of nicotine biosynthesis
-
-
PWY-7342
superpathway of ornithine degradation
-
-
ORNDEG-PWY
superpathway of phospholipid biosynthesis II (plants)
-
-
PHOSLIPSYN2-PWY
superpathway of photosynthetic hydrogen production
-
-
PWY-7731
superpathway of polyamine biosynthesis II
-
-
POLYAMINSYN3-PWY
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
-
-
PWY0-166
superpathway of scopolin and esculin biosynthesis
-
-
PWY-7186
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
-
-
PWY-7328
syringetin biosynthesis
-
-
PWY-5391
taurine biosynthesis I
-
-
PWY-5331
taurine biosynthesis II
-
-
PWY-7850
taurine biosynthesis III
-
-
PWY-8359
taxol biosynthesis
-
-
PWY-5660
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VI (Helicobacter)
-
-
REDCITCYC
TCA cycle VII (acetate-producers)
-
-
PWY-7254
TCA cycle VIII (Chlamydia)
-
-
TCA-1
tea aroma glycosidic precursor bioactivation
-
-
PWY-7114
teichuronic acid biosynthesis (B. subtilis 168)
-
-
PWY-7820
testosterone and androsterone degradation to androstendione (aerobic)
-
-
PWY-6943
tetradecanoate biosynthesis (mitochondria)
-
-
PWY66-430
tetrahydrofolate biosynthesis I
-
-
PWY-6614
tetrahydrofolate biosynthesis II
-
-
PWY2DNV-11
tetrahydromethanopterin biosynthesis
-
-
PWY-6148
tetrahydromonapterin biosynthesis
-
-
PWY0-1433
tetrapyrrole biosynthesis I (from glutamate)
-
-
PWY-5188
tetrapyrrole biosynthesis II (from glycine)
-
-
PWY-5189
theobromine biosynthesis I
-
-
PWY-5039
theophylline degradation
-
-
PWY-6999
thiamine diphosphate biosynthesis III (Staphylococcus)
-
-
PWY-6907
thiamine diphosphate biosynthesis IV (eukaryotes)
-
-
PWY-6908
thiamine diphosphate salvage IV (yeast)
-
-
PWY-7356
thiazole component of thiamine diphosphate biosynthesis I
-
-
PWY-6892
thiazole component of thiamine diphosphate biosynthesis II
-
-
PWY-6891
thiocyanate degradation II
-
-
PWY-743
thioredoxin pathway
-
-
THIOREDOX-PWY
thiosulfate disproportionation IV (rhodanese)
-
-
PWY-5350
thiosulfate oxidation I (to tetrathionate)
-
-
THIOSULFOX-PWY
threo-tetrahydrobiopterin biosynthesis
-
-
PWY-6983
thyroid hormone metabolism II (via conjugation and/or degradation)
-
-
PWY-6261
toluene degradation II (aerobic) (via 4-methylcatechol)
-
-
TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
-
-
TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
-
-
TOLUENE-DEG-2-OH-PWY
trans, trans-farnesyl diphosphate biosynthesis
-
-
PWY-5123
trans-caffeate degradation (aerobic)
-
-
PWY-8003
trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria)
-
-
PWY-6475
trans-zeatin biosynthesis
-
-
PWY-2681
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
-
-
PWY-5410
trehalose biosynthesis I
-
-
TRESYN-PWY
trehalose biosynthesis II
-
-
PWY-881
trehalose biosynthesis III
-
-
TREHALOSESYN-PWY
trehalose biosynthesis IV
-
-
PWY-2622
trehalose biosynthesis V
-
-
PWY-2661
trehalose degradation I (low osmolarity)
-
-
TREDEGLOW-PWY
trehalose degradation II (cytosolic)
-
-
PWY0-1182
trehalose degradation IV
-
-
PWY-2722
trehalose degradation V
-
-
PWY-2723
trehalose degradation VI (periplasmic)
-
-
PWY0-1466
triacylglycerol degradation
-
-
LIPAS-PWY
tricin biosynthesis
-
-
PWY-7995
tRNA charging
-
-
TRNA-CHARGING-PWY
tRNA processing
-
-
PWY0-1479
tRNA splicing I
-
-
PWY-6689
tRNA splicing II
-
-
PWY-7803
trypanothione biosynthesis
-
-
TRYPANOSYN-PWY
tunicamycin biosynthesis
-
-
PWY-7821
two-component alkanesulfonate monooxygenase
-
-
ALKANEMONOX-PWY
tylosin biosynthesis
-
-
PWY-7415
type I lipoteichoic acid biosynthesis (S. aureus)
-
-
PWY-7817
ubiquinol-10 biosynthesis (early decarboxylation)
-
-
PWY-5857
ubiquinol-10 biosynthesis (late decarboxylation)
-
-
PWY-5872
ubiquinol-6 biosynthesis (late decarboxylation)
-
-
PWY3O-19
ubiquinol-6 biosynthesis from 4-aminobenzoate (yeast)
-
-
PWY-7230
ubiquinol-7 biosynthesis (early decarboxylation)
-
-
PWY-5855
ubiquinol-7 biosynthesis (late decarboxylation)
-
-
PWY-5873
ubiquinol-8 biosynthesis (early decarboxylation)
-
-
PWY-6708
ubiquinol-8 biosynthesis (late decarboxylation)
-
-
PWY-5870
ubiquinol-9 biosynthesis (early decarboxylation)
-
-
PWY-5856
ubiquinol-9 biosynthesis (late decarboxylation)
-
-
PWY-5871
UDP-alpha-D-galactofuranose biosynthesis
-
-
PWY-7622
UDP-alpha-D-galactose biosynthesis
-
-
PWY-7344
UDP-alpha-D-galacturonate biosynthesis I (from UDP-D-glucuronate)
-
-
PWY-4861
UDP-alpha-D-glucose biosynthesis
-
-
PWY-7343
UDP-alpha-D-glucuronate biosynthesis (from myo-inositol)
-
-
PWY-4841
UDP-alpha-D-glucuronate biosynthesis (from UDP-glucose)
-
-
PWY-7346
UDP-alpha-D-xylose biosynthesis
-
-
PWY-4821
UDP-beta-L-arabinose biosynthesis II (from beta-L-arabinose)
-
-
PWY-82
UDP-beta-L-rhamnose biosynthesis
-
-
PWY-3261
UDP-N-acetyl-D-galactosamine biosynthesis I
-
-
PWY-5512
UDP-N-acetyl-D-galactosamine biosynthesis II
-
-
PWY-5514
UDP-N-acetyl-D-galactosamine biosynthesis III
-
-
PWY-8013
UDP-N-acetyl-D-glucosamine biosynthesis I
-
-
UDPNAGSYN-PWY
UDP-N-acetyl-D-glucosamine biosynthesis II
-
-
UDPNACETYLGALSYN-PWY
UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
-
-
PWY-6387
UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
-
-
PWY-6386
UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-diaminopimelate containing)
-
-
PWY-7953
ultra-long-chain fatty acid biosynthesis
-
-
PWY-8041
umbelliferone biosynthesis
-
-
PWY-6982
UMP biosynthesis I
-
-
PWY-5686
UMP biosynthesis II
-
-
PWY-7790
UMP biosynthesis III
-
-
PWY-7791
urate conversion to allantoin I
-
-
PWY-5691
urate conversion to allantoin II
-
-
PWY-7394
urate conversion to allantoin III
-
-
PWY-7849
urea cycle
urea degradation I
-
-
PWY-5703
urea degradation II
-
-
PWY-5704
UTP and CTP de novo biosynthesis
-
-
PWY-7176
UTP and CTP dephosphorylation I
-
-
PWY-7185
UTP and CTP dephosphorylation II
-
-
PWY-7177
valproate beta-oxidation
-
-
PWY-8182
vancomycin resistance I
-
-
PWY-6454
vancomycin resistance II
-
-
PWY-6455
vanillin and vanillate degradation I
-
-
PWY-7097
vanillin and vanillate degradation II
-
-
PWY-7098
vanillin biosynthesis I
-
-
PWY-5665
vernolate biosynthesis III
-
-
PWY-6917
very long chain fatty acid biosynthesis I
-
-
PWY-5080
very long chain fatty acid biosynthesis II
-
-
PWY-7036
viridicatumtoxin biosynthesis
-
-
PWY-7659
vitamin E biosynthesis (tocopherols)
-
-
PWY-1422
vitamin E biosynthesis (tocotrienols)
-
-
PWY-7436
vitamin K-epoxide cycle
volatile benzenoid biosynthesis I (ester formation)
-
-
PWY-4203
volatile esters biosynthesis (during fruit ripening)
-
-
PWY-6801
VTC2 cycle
-
-
PWY4FS-12
wax esters biosynthesis II
-
-
PWY-5885
wogonin metabolism
-
-
PWY-7213
xanthine and xanthosine salvage
-
-
SALVPURINE2-PWY
xanthohumol biosynthesis
-
-
PWY-5135
xanthommatin biosynthesis
-
-
PWY-8249
xylan biosynthesis
-
-
PWY-5800
xylitol degradation I
-
-
LARABITOLUTIL-PWY
xyloglucan biosynthesis
-
-
PWY-5936
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
zealexin biosynthesis
-
-
PWY-6888
zymosterol biosynthesis
-
-
PWY-6074
(5R)-carbapenem carboxylate biosynthesis
-
-
PWY-5737
adipate degradation
-
-
PWY-8354
bile acid biosynthesis, neutral pathway
-
-
PWY-6061
catecholamine biosynthesis
-
-
PWY66-301
cis-vaccenate biosynthesis
-
-
PWY-5973
cyanate degradation
-
-
CYANCAT-PWY
daunorubicin biosynthesis
-
-
PWY-7352
diterpene phytoalexins precursors biosynthesis
-
-
PWY-2981
dolichol and dolichyl phosphate biosynthesis
-
-
PWY-6129
enterobactin biosynthesis
-
-
ENTBACSYN-PWY
folate polyglutamylation
-
-
PWY-2161
methylaspartate cycle
-
-
PWY-6728
molybdenum cofactor biosynthesis
-
-
PWY-8171
myo-inositol biosynthesis
-
-
PWY-2301
octane oxidation
-
-
P221-PWY
oxalate biosynthesis
-
-
PWY-6699
phenylmercury acetate degradation
-
-
P641-PWY
suberin monomers biosynthesis
-
-
PWY-1121
urea cycle
-
-
PWY-4984
vitamin K-epoxide cycle
-
-
PWY-7999
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
-
3705, 3829, 4078, 4095, 4376, 4464, 4488, 34330, 94290, 94292, 114208, 114210, 114303, 114311, 135446, 136340, 208511, 208972, 208990, 209404, 210262, 285561, 285635, 289165, 349711, 391450, 391471, 391489, 391490, 391491, 391495, 391871, 392023, 392029, 392290, 392374, 392847, 392879, 392889, 393219, 393263, 393452, 394031, 394398, 439267, 485618, 488547, 488550, 488566, 488911, 488915, 489013, 489023, 489072, 636923, 636931, 636941, 638657, 638658, 639733, 642664, 643141, 643144, 643156, 643157, 643158, 643284, 643409, 643724, 645435, 645818, 649086, 653437, 653521, 653641, 654028, 655033, 655054, 655104, 655322, 655932, 656134, 656625, 656792, 656908, 656917, 657020, 657088, 659599, 660090, 660136, 660146, 660156, 660172, 660231, 660237, 660258, 660790, 661222, 662486, 663026, 663087, 663092, 663095, 664319, 664350, 664564, 665755, 666305, 666639, 666682, 666705, 667200, 667299, 668202, 669159, 669969, 670017, 670503, 670544, 671351, 672499, 673694, 673908, 675122, 675589, 675662, 675665, 675666, 675667, 676401, 676465, 676467, 676479, 676511, 676558, 676572, 676578, 676642, 676667, 676714, 676721, 676843, 677073, 677120, 677800, 678415, 679946, 679951, 680032, 680419, 680566, 680848, 681139, 681239, 681609, 681610, 681612, 682292, 682298, 682357, 682374, 682379, 682452, 682535, 682665, 682960, 685432, 685665, 685820, 686070, 686071, 686769, 687437, 687438, 687471, 687476, 688199, 688645, 689449, 689468, 689561, 689592, 690761, 691085, 691386, 691390, 691492, 691654, 692050, 692452, 693422, 694037, 694057, 694623, 694646, 695305, 696834, 697346, 698095, 698496, 699243, 699260, 699265, 699269, 699792, 700595, 700650, 700684, 700697, 700716, 700724, 700729, 700741, 700748, 700752, 700837, 700839, 700855, 701033, 701597, 702757, 702831, 702835, 703398, 703817, 703847, 704539, 704891, 705371, 705382, 705392, 705592, 705651, 705729, 705844, 705951, 706157, 706172, 706181, 706340, 706356, 706357, 706529, 706563, 706771, 706773, 708265, 710240, 711061, 711116, 711477, 711532, 711596, 711725, 711993, 712013, 712079, 713231, 713233, 713321, 713363, 714099, 714516, 714628, 714697, 715830, 716056, 716421, 716467, 716487, 716545, 716546, 716602, 717456, 717607, 717875, 718772, 719540, 719601, 720129, 720650, 720654, 720661, 720750, 720761, 720904, 721057, 721437, 721777, 722042, 723349, 723503, 723554, 723888, 725802, 725954, 726148, 726154, 726175, 726208, 726254, 728450, 728463, 728514, 728518, 728526, 728530, 728699, 729163, 729489, 729728, 729880, 730149, 730273, 730375, 730565, 730591, 730930, 732633, 732659, 733408, 734020, 734388, 734424, 734425, 734547, 734979, 734992, 735878, 736289, 736568, 736844, 736971, 737013, 737040, 737968, 738067, 738386, 738748, 738762, 739074, 739278, 739279, 739333, 739344, 739349, 739363, 739369, 739807, 739880, 740489, 741123, 741154, 741218, 741281, 742602, 742994, 743460, 743545, 743606, 743901, 744526, 745361, 746095, 747104, 747148, 747486, 747507, 748330, 748558, 748817, 748920, 748935, 748941, 748980, 749015, 750003, 750130, 750861, 751269, 751846, 751922, 751948, 754915, 755045, 756234, 756752, 756921, 757460, 757479, 757482, 757706, 757815, 758005, 758076, 758093, 758161, 758222, 758321, 759588, 759685, 759800, 759920, 759921, 759924, 759944, 759983, 759994, 760158, 760427, 761177, 761880, 762120, 762702, 763095, 763344, 763585, 763605, 763683, 763939, 764384, 765154, 765598, 765649, 765812
-
-
-
491401, 491402, 649671, 650438, 651988, 652548, 652903, 653484, 660200, 660321, 663037, 663048, 663087, 663132, 663189, 665444, 667228, 670544, 670777, 675662, 675666, 676617, 676714, 678358, 678770, 679817, 682399, 682400, 682652, 689513, 689561, 690761, 699524, 700855, 701551, 706390, 706859, 714096, 721777, 725689, 730591, 739265, 759265, 759282
A2YQL4, A3C4S4, O24210, O64437, P48642, P53682, P53683, P53684, P93422, Q0D3F2, Q0DSH9, Q0IS70, Q0JEZ8, Q10DK7, Q10N21, Q1AHB2, Q1WM16, Q2KNB4, Q2KNB5, Q2KNB7, Q2KNB9, Q2QQJ5, Q33CD8, Q33CE0, Q40673, Q5F1L4, Q5NTH3, Q5NTH4, Q5VRH3, Q5W676, Q69XR7, Q6BDZ9, Q6K2Y8, Q6K4T7, Q6T5D1, Q6Z398, Q6Z5I0, Q6Z744, Q6ZFH6, Q75I93, Q75PR2, Q7X7H9, Q7XN11, Q7XR61, Q84QK0, Q852M0, Q8LH82, Q8LQ68, Q93VK6, Q940L0, Q9FE01, Q9FRT2, Q9SE42, Q9SNN0, Q9XGP7
SwissProt
-
659399, 662729, 670612, 676400, 677073, 681609, 689078, 689239, 689473, 689474, 690761, 691512, 692906, 694181, 694407, 694742, 697943, 698095, 699584, 699740, 700712, 700756, 702734, 702770, 704357, 705391, 706156, 706252, 709028, 716421, 716549, 716700, 718211, 718691, 719564, 720659, 722655, 723443, 726190, 726217, 726239, 726261, 727175, 733874, 734276, 734386, 734426, 734931, 735232, 736991, 737015, 737025, 737032, 738297, 738708, 739265, 740903, 741178, 742050, 742051, 743455, 743974, 744147, 746102, 746105, 748051, 749112, 749356, 757324, 757480, 759275, 759282, 759301, 761740, 762332, 763097, 765404
A0A0K0K9B1, A0A2H5BXP6, A0A2H5BXP8, B3IYE3, B3VMC0, B3VMC1, B3VMC2, B6RGY0, E7EC32, O24174, P24626, P29250, P93409, Q01401, Q01I44, Q01IL1, Q07661, Q0D4J5, Q0DBF4, Q0DHN6, Q0DZ46, Q0INY7, Q0J290, Q0J7R9, Q0J8A4, Q10BJ7, Q10LH0, Q10MI9, Q10PV5, Q10SX6, Q27PX2, Q2QWN6, Q307R0, Q336V5, Q337S3, Q40710, Q43009, Q53NG8, Q53WJ1, Q5N942, Q5VNN5, Q65XK0, Q69P84, Q6ESJ0, Q6H627, Q6K2E8, Q6K9M5, Q6YTE2, Q6Z1Y6, Q6Z2X6, Q6Z4E4, Q6Z4G3, Q6Z9G0, Q6ZD89, Q6ZLJ9, Q70G58, Q75HZ9, Q75IQ9, Q7FAE1, Q7FAE2, Q7XB43, Q7XN12, Q7XR89, Q7XZH5, Q7XZR6, Q84LK3, Q84Q89, Q84ZN6, Q852M4, Q8H384, Q8H8T0, Q8L6H4, Q8LIL0, Q8S5N2, Q93WY5, Q941T1, Q94EE9, Q9AR41, Q9ATK9, Q9FRX7, Q9FSE5, Q9FW31, Q9FWK4, Q9LRE9, Q9LRI6, Q9M5J1, Q9SSX0, Q9XEA6, Q9XG81, U3PTC5
Uniprot
352 Vietnamese local rice cultivars, granule-bound starch synthase I gene or Waxy gene
UniProt
a newly-developed super-high-yield two-line hybrid rice LiangYouPeiJiu (LYPJ) together with its paternal line Wumang 9311 (WM9311) and maternal line Peiai 64S (PA64S) are used as experimental materials
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APT2; subsp. indica, wild-type and TGMS mutant line Annong S-1 line, gene APT2
SwissProt
CMT1; subsp. japonica, encodes a total of 10 genes that contain the highly conserved MTase catalytic domain
Q8H854
UniProt
coding region of the OsPUL gene; ssp. indica cv. 9311, and ssp. japonica cv.Wuxiangjing 9, gene OsPUL
UniProt
cold-sensitive cultivar Doongara and the relatively cold-tolerant cultivar HSC55
SwissProt
cultivar Nipponbare
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cultivar Nipponbare. Four allelic mutant lines of rice generated by retrotransposon Tos17 insertion and carrying SSI mutations expressed in endosperm, one containing a null mutation and three exhibiting different levels of SSI activity
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cultivars Jaya, GEB24 (indica), BSI 115 (japonica), Mahsuri (indica-japonica derivative) and CoRH2 (hybrid)
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cv. Dongjinbyeo, diverse PME genes, contains 43 different types of pectin methyltesterases, PMEs
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cv. Taichung Native 1
SwissProt
cv. Zhongjiazao 17, grown in paddy fields during normal growing seasons at the China National Rice Research Institute, in Hangzhou, as well as in a growth chamber
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eight types of APx have been desribed in Oryza sativa, two cytosolic, OsAPx1 and OsAPx2, two putative peroxisomal, OsAPx3 and OsAPx4, and four chloroplastic isoforms OsAPx5, OsAPx6, OsAPx7 and OsAPx8
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enzyme contains a supplementary C-terminal domain related to endothelial monocyte activating polypeptide II, i.e. EMAPII, a cytokine
SwissProt
expression is not regulated by ethylene, 5'-methylthioadenosine, or methionine
SwissProt
four putative GDH genes (OsGDH1-4) are present in the rice genome. The GDH sequences from rice and other species can be classified into two types (I and II). OsGDH1-3 belong to type II genes, whereas OsGDH4 belong to type I like gene
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gene AGPL1; gene AGPL1, the AGP gene family consists of two genes, OsAGPS1 and OsAGPS2, encoding small subunits and four genes, OsAGPL1, OsAGPL2, OsAGPL3 and OsAGPL4, encoding large subunits of this enzyme heterotetrameric complex
UniProt
gene AGPL2; gene AGPL2, the AGP gene family consists of two genes, OsAGPS1 and OsAGPS2, encoding small subunits and four genes, OsAGPL1, OsAGPL2, OsAGPL3 and OsAGPL4, encoding large subunits of this enzyme heterotetrameric complex
UniProt
gene AGPL3; gene AGPL3, the AGP gene family consists of two genes, OsAGPS1 and OsAGPS2, encoding small subunits and four genes, OsAGPL1, OsAGPL2, OsAGPL3 and OsAGPL4, encoding large subunits of this enzyme heterotetrameric complex
UniProt
gene AGPL4, the AGP gene family consists of two genes, OsAGPS1 and OsAGPS2, encoding small subunits and four genes, OsAGPL1, OsAGPL2, OsAGPL3 and OsAGPL4, encoding large subunits of this enzyme heterotetrameric complex
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gene AGPS1; gene AGPS1, the AGP gene family consists of two genes, OsAGPS1 and OsAGPS2, encoding small subunits and four genes, OsAGPL1, OsAGPL2, OsAGPL3 and OsAGPL4, encoding large subunits of this enzyme heterotetrameric complex
UniProt
gene AGPS2 a and b; the AGP gene family consists of two genes, OsAGPS1 and OsAGPS2, encoding small subunits and four genes, OsAGPL1, OsAGPL2, OsAGPL3 and OsAGPL4, encoding large subunits of this enzyme heterotetrameric complex
SwissProt
gene BAC83770, putative beta-amylase, japonica group; var. japonica and indica, different cultivars, 98 backcross inbred lines from japonica x indica, i.e. Nipponbare x Kasalath, cross, overview
Q6Z5B7
SwissProt
gene Bac83773, putative beta-amylase, japonica group; var. japonica and indica, different cultivars, 98 backcross inbred lines from japonica x indica, i.e. Nipponbare x Kasalath, cross, overview
SwissProt
gene family consists of two genes OsAGPS1 and OsAGPS2 encoding enzyme small subunits and four genes OsAGPL1, OsAGPL2, OsAGPL3, OsAGPL4 encoding enzyme large subunits
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gene R4CL, putative 4-coumarate coenzyme A ligase, i.e. Os02g0177600 protein; gene R4CL
SwissProt
indica variety Zhe733 and japonica variety Zhenongda104
SwissProt
isoform PLDbeta1; identification of 17 phospholipase D genes including isoform SP-PLD harboring a signal peptide at the N-terminus. Most genes are differentially expressed in different tissues, are induced by hormones or stress conditions
SwissProt
isozyme DPK1; ssp. japonica, cv. Jiucaiqing, four isozymes DPK1-DPK4
SwissProt
isozyme DPK2; ssp. japonica, cv. Jiucaiqing, four isozymes DPK1-DPK4
SwissProt
isozyme DPK4; ssp. japonica, cv. Jiucaiqing, four isozymes DPK1-DPK4
SwissProt
isozyme DPPK3; ssp. japonica, cv. Jiucaiqing, four isozymes DPK1-DPK4
SwissProt
isozyme PP2A-5; ssp. indica, var. IR36, 5 isozymes of PP2A, PP2A1-5, each containing a different subunit
SwissProt
isozyme PP2A2; ssp. indica, var. IR36, 5 isozymes of PP2A, PP2A1-4, each containing a different subunit
SwissProt
isozyme PP2A4; ssp. indica, var. IR36, 5 isozymes of PP2A, PP2A1-4, each containing a different subunit
SwissProt
isozymes XTH10, XTH11, XTH12, and XTH18; isozymes XTH10, XTH11, XTH12, and XTH18
SwissProt
isozymes XTH2-XTH4, XTH6, XTH7, XTH9, XTH13-XTH16, XTH19, XTH20, and XTH22-XTH29
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japonica cv. Nipponbsare wild-type, F2 mutant from a cross of Oscyt-inv1 mutant with Oryza saliva induce cv. Kasalath wild-type
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L. cv. Nipponbare
Swissprot
large subunit, gene V3; subsp. japonica, genes virescent3, V3, and stripe1, Str1, encoding the large and small subunits, RNRL1, and RNRS1
UniProt
MAPKK 10-2; cv. japonica and indica, var. Pusa Basmati 1, MAP kinase kinase isozyme MAPKK 10-2
UniProt
MAPKK 1; cv. japonica and indica, var. Pusa Basmati 1, MAP kinase kinase isozyme MAPKK 1
UniProt
MAPKK 3; cv. japonica and indica, var. Pusa Basmati 1, MAP kinase kinase isozyme MAPKK 3
UniProt
MAPKK 4, fragment; cv. japonica and indica, var. Pusa Basmati 1, MAP kinase kinase isozyme MAPKK 4
UniProt
MAPKK 6; cv. japonica and indica, var. Pusa Basmati 1, MAP kinase kinase isozyme MAPKK 6
UniProt
MET1B or MET1-2; subsp. japonica, encodes a total of 10 genes that contain the highly conserved MTase catalytic domain
UniProt
mitochondrial isozyme gamma-aminobutyrate transaminase 2 or GABA-T3; isozyme GABA-T3
UniProt
mutant NB208 exhibiting a temperature-sensitive defect in root elongation, NB208 is a GNA1 null mutant
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OsGS2; var. indica, drought-sensitive IR-64 cultivar and drought-tolerant Khitish cultivar, gene OsGS2
UniProt
overexpression in rice mutant Nootripathu, which accumulates proanthocyanidins exclusively in pericarp
UniProt
ribulose-1,5-bisphosphate carboxylase/oxygenase large chain and small subunit; Oryza sativa L. cv. Dongjin
Q5K3B1, Q2QTJ7
UniProt
rice
3259, 5540, 30844, 30845, 34738, 135445, 136415, 136417, 209402, 210596, 210601, 288934, 391450, 391926, 392018, 394389, 394753, 394754, 485615, 485618, 488904, 638656, 645457, 649333, 649483, 650400, 652653, 700629
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rice cultivar Nipponbare, length of second leaf sheath of 7 days old seedlings grown in test solution
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S-adenosylmethionine decarboxylase proenzyme; cold-tolerant japonica cultivar Yukihikari and cold-susceptible indica variety TKM9
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salt tolerant landrace cv. Pokkali and salt-sensitive cv. IR64, gene OsPgk2a or Os02g07260, isozyme OsPGK2a
UniProt
several cell-wall invertase isozymes encoded by genes CIN1-9, the vacuolar isozymes are encoded by genes VIN
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single copy gene on rice chromosome 4; ssp. indica cv. 9311, and ssp. japonica cv.Wuxiangjing 9, gene OsPUL
UniProt
small subunit, gene Str1; subsp. japonica, genes virescent3, V3, and stripe1, Str1, encoding the large and small subunits, RNRL1, and RNRS1
UniProt
ssp. japonica, wild-type strain ZS97, gene eui or OSJNBa0095J22.13
SwissProt
subsp. japonica cv. Nipponbare, 17 PLD genes encoding isozymes, e.g. genes OsPLDalpha1, OsPLDalpha5, and OsPLDbeta1
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subsp. japonica, encodes a total of 10 genes that contain the highly conserved MTase catalytic domain
UniProt
subsp. japonica, varieties Hayahishiki, Nippon Bare, and Fujisaka 5, gene ipt
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susceptible N and resistant IL7 rice cultivars, from Nipponbare, gene OsNOMT
UniProt
susp. japonica; susp. japonica and indica; different varieties are investigated
Uniprot
The enzyme may be a 3-phytase (EC 3.1.3.8), or a 4-phytase (synonym 6-phytase, EC 3.1.3.26). The product of the hydrolysis of myo-inositol hexakisphosphate to 1D-myo-inositol 1,2,4,5,6-pentakisphosphate or alternatively 1D-myo-inositol 1,2,3,5,6-pentakisphosphate has not been identified.
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two cultivars, cv. Shanyou 63 and Liangyoupeijiu, Peiai 64S/93-11, an indica/indica F1 hybrid
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var. Donganbyeo, and mutant lines resistant to growth inhition by 5-methyltryptophan
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var. indica, drought-sensitive IR-64 cultivar and drought-tolerant Khitish cultivar, gene OsGS1;2
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wild type, two mutants with suppressed expression of F2KP, Tos 17 insertion mutant of OsF2KP1, RNAi mutants of OsF2KP2
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wild-type strain Nippobare and Ilpumbyeogene, and mutant lines Goami2 and ami-BEIIb, a transgenic line with down-regulated SBEIIb, waxy in the wx locus
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Zmt3; subsp. japonica, encodes a total of 10 genes that contain the highly conserved MTase catalytic domain
UniProt
Please wait a moment until the data is sorted. This message will disappear when the data is sorted.
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
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cytosolic mRNA of OsPPDKB is induced in the reproductive organs after pollination, and greatly increases until about 10 days after fertilization. This mRNA is localized mainly in the endosperm, aleurone, and scutellum of the developing kernel
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cell-wall invertase isozymes CIN1-3, 5, and 8, high expression level of CIN2, plant hormones abscisic acid and gibberellic acid induce cell wall isozyme CIN2 in peduncles antagonizing both peduncle elongation and maintenance of CIN2 transcript levels
OsNAS3 is widely expressed in roots, especially in vascular bundle, epidermis, exodermis, stem, and old leaf tissues under Fe excess compared to control plants
additional information
isozyme Os4CL2 is specifically expressed in the anther
OsGPAT3 is preferentially expressed in the tapetum and microspores of the anther. In anther tissues, the expression of OsGPAT3 is detectable as early as stage 7, peaks at stage 8a, declined gradually until stage 10, then increases and peaks again at a lower level at stage 12, and thereafter declines, dynamic expression pattern of OsGPAT3
the enzyme is specifically expressed in anthers, with an expressional peak at the bicellular pollen stage
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OsSK1 is induced by treatment with the elicitor N-acetylchitoheptaose
OsSK2 is induced by treatment with the elicitor N-acetylchitoheptaose
wild-type, and transformed callus lines expressing mtr1-D mutation, experimental system for feeding experiments with external L-phenylalanine
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high content of AS in grains in the middle stage of ripening, in vascular tissues
in the coat barely visible expression of OsCIN3, in the embryo very strong expression of OsCIN3, in the endosperm weak expression of OsCIN3
in the coat strong expression of OsCIN1, in the embryo barely visible expression of OsCIN1, in the endosperm no expression of OsCIN1
in the coat weak expression of OsCIN2, in the embryo strong expression of OsCIN2, in the endosperm strong expression of OsCIN2
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393263, 393271, 485285, 656792, 656949, 657134, 666584, 677800, 678415, 680848, 700650, 715830, 721466, 750130, 759920
the level of OsDTC2 mRNA in suspension-cultured rice cells began to increase 3 h after addition of the elicitor and reached the maximum after 8 h
treated with benzothiadiazole and infected by Xanthomonas oryza pv. oryza. Treatment activates expression of a diacylglycerol kinase gene, OsDAGK1, and a phosphoinositide-specific phospholipase C gene, OsPI-PLC1, and a defence-related EREBP transcriptional factor gene, OsBIERF3
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A0A0K0K9B1, O23809, O80403, P15280, P93430, Q01401, Q2KNB5, Q2KNB9, Q53LQ0, Q5W676, Q67UF5, Q688T8, Q69T99, Q6AVT2, Q6Z398, Q7G065, Q8LH82, Q9ARH9, Q9SNN0
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488904, 636923, 636931, 643114, 643141, 643144, 643153, 643156, 643157, 643158, 663092, 676561, 676578, 676591, 676714, 681617, 682469, 702734, 702757, 702831, 705382, 706256, 706746, 716495, 716521, 716622, 720129, 723349, 732633, 735862, 737040, 737042, 739369, 751922, 751948, 756999, 757817, 758026, 763097
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cytosolic mRNA of OsPPDKB is induced in the reproductive organs after pollination, and greatly increases until about 10 days after fertilization. This mRNA is localized mainly in the endosperm, aleurone, and scutellum of the developing kernel
OsAGPS2b and OsAGPL2 are the major isoforms
-
SSIIa protein is present even in Nipponbare endosperm but is not associated with starch granules at the milky stage of endosperm
OsNAS3 is widely expressed in roots, especially in vascular bundle, epidermis, exodermis, stem, and old leaf tissues under Fe excess compared to control plants
OsNAS3 is widely expressed in roots, especially in vascular bundle, epidermis, exodermis, stem, and old leaf tissues under Fe excess compared to control plants
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HXK10 is expressed only in flowers
in the lemma, palea, stamens, and pistil
of 4-month-old rice plant. EXoressin of OsGlu1 is strongly induced by H2O2 and senescence
expression of OsSK1 is upregulated specifically during the heading stage of panicle development
expression of OsSK3 is upregulated specifically during the heading stage of panicle development
A2Z7C4, H6TFZ4, P30298, P31924, Q10LP5, Q10RB4, Q43009, Q5Z6G7, Q5Z6H1, Q5Z6H3, Q6K973, Q6ZAN9, Q76BW5, Q7XBU8
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strongly induced in adventitious roots and in the youngest internode of partially submerged plants
the enzyme is primarily expressed in rice culm basal internodes
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cytosolic mRNA of OsPPDKB is induced in the reproductive organs after pollination, and greatly increases until about 10 days after fertilization. This mRNA is localized mainly in the endosperm, aleurone, and scutellum of the developing kernel
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genotype G37 (red pericarp) shows higher expression than G7 (light brown) and G33 (red pericarp) at milky and mature grain development stages but lower than both parents. The transcript levels are comparatively low in mature grain
A2XFI3, A2XN40, A3C4N5, A4GUA1, B6RGY0, D5L1S4, H6TFZ4, I2FFE9, O23809, O24174, O64437, O64454, P14655, P15280, P17814, P30298, P31924, P93416, P93430, Q06C47, Q0DHN6, Q0DZ46, Q0IP69, Q0JF02, Q10CE4, Q10LH0, Q10LP5, Q10RB4, Q2KNB5, Q2KNB9, Q40710, Q42982, Q43009, Q53NG8, Q53WJ1, Q5K3B1 and Q2QTJ7, Q5N800, Q5VNN5, Q5VRH3, Q5W676, Q5Z6G7, Q5Z6H1, Q5Z6H3, Q5Z8T3, Q653T6, Q67W82, Q688T8, Q68YV8, Q69P84, Q69T99, Q69XR7, Q6AVT2, Q6BD07, Q6E7D7, Q6ETN3, Q6H627, Q6H6C7, Q6K2E8, Q6K973, Q6SZS7, Q6Z398, Q6Z4E4, Q6Z9G0, Q6ZAC1, Q6ZAN9, Q6ZD89, Q6ZFH6, Q6ZGW6, Q6ZI95, Q6ZLJ9, Q75PK6, Q75PK7, Q76BW5, Q7G065, Q7XBU8, Q7XR89, Q84LK3, Q84ST4, Q8LH82, Q8W3J0, Q8W5G9, Q941T1, Q9ARH9, Q9FRT2, Q9FRX7, Q9LKF8, Q9LRE9, Q9LRI6, Q9M4X0, Q9M5J1, Q9SNN0
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3705, 4488, 94290, 94292, 114208, 114210, 208972, 391450, 391495, 392018, 392023, 392847, 394389, 488904, 488915, 637141, 638656, 638657, 638658, 639818, 643141, 643144, 643153, 643156, 653554, 653641, 654028, 657113, 660200, 660231, 660237, 663026, 663087, 663764, 665755, 666593, 666683, 668202, 672499, 675122, 675589, 675662, 676491, 676561, 676572, 676582, 676642, 676714, 677564, 678891, 679977, 681239, 681242, 681609, 681610, 681617, 682292, 682357, 682374, 682379, 682443, 682449, 682452, 682457, 682466, 682850, 682960, 685731, 688645, 688653, 689462, 689557, 689593, 689685, 692452, 693851, 694646, 694739, 694762, 698095, 699262, 699792, 700712, 700752, 700769, 700859, 701033, 703847, 704891, 705371, 705651, 705951, 706156, 706344, 706390, 710240, 710294, 712013, 713233, 714099, 716467, 716602, 719020, 720020, 721870, 723143, 723440, 725954, 726175, 726217, 726261, 728470, 728512, 728526, 730610, 732633, 734020, 734389, 734401, 734547, 734879, 735232, 735793, 736847, 738762, 739288, 739301, 739333, 739628, 740906, 741123, 741281, 741396, 742994, 742995, 743811, 745009, 746223, 747003, 748471, 748482, 749015, 751922, 754915, 757324, 757815, 757979, 758005, 758076, 759800, 759921, 759944, 761177, 761740, 762120, 762702, 763095, 763344, 765812
although the OsNTRC gene is expressed in roots and shoots of seedlings, the protein is exclusively found in shoots and mature leaves
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application of methionine on wounded rice leaf stimulates naringenin 7-O-methyltransferase activity
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constitutively expressed, upregulated by dark-induced senescence in rice leaves. Senescence-induced expression is enhanced by abscisic acid, but inhibited by cytokinin
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high content of AS in leaf sheath at the second position from the fully expanded top leaf, the contents gradually decreases in leaf sheaths as a function of increasing age, in vascular tissues
high expression of GSTU17 in mature, lower in young leaves, no expression in immature leaves
in developing vascular bundle cells as well as in parenchyma cells
-
in the leaf tissue the Leg1 is the highest expressed isoform, followed by Leg3
induction during leaf senescence with highest level at the S3 senescent stage
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isoform RbcS1 is not expressed in leaf blade but in leaf sheath, culm, anther, and root central cylinder. Isoform RbcS3 is significantly expressed in mesophyll cells of leaf blade but not expressed in the basal, pale-green part of leaf sheath
only the OsMET1-1 mRNAis slightly accumulated in young leaves, in which virtually no OsMET1-2 transcripts is detectable
OsAGPS2a is the main small subunit isoform
OsCPS2ent mRNA is specifically induced in leaves prior to production of the corresponding phytoalexins
-
OsDTS2 mRNA in leaves is up-regulated by conditions that stimulate phytoalexin biosynthesis
OsNAAT1 is induced in all the cells of Fe-deficient leaves
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OsNAS1 and OsNAS2 transcripts are not detected in Fe-sufficient roots, OsNAS3 transcript is present, expression is suppressed in response to Fe deficiency. In Fe-deficient plants, OsNAS1 and OsNAS2 are expressed in the vascular bundles of green leafes showing severe chlorosis. OsNAS3 expression is restricted to companion cells of leaves irrespective of Fe status
OsNAS3 is widely expressed in roots, especially in vascular bundle, epidermis, exodermis, stem, and old leaf tissues under Fe excess compared to control plants
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ratio of expression of isozymes encoded by genes dxs1, dxs2, and dxs3 is 9:181.1
-
sheath and blade, coordinate expression of enzyme and PII-like protein GlnB during the life span
the enzyme is expressed as 800 nt and 900 nt transcripts. Whereas the 900 nt transcript is present in both root and leaf mRNA, the 800 nt transcript is only detectable in root mRNA
transcript level of OsHXK2 is increased markedly by the treatment with glucose or fructose, for 12 and 24 h. Activity in excised leaves
transcript level of OsHXK5 is increased markedly by the treatment with glucose or fructose, for 12 and 24 h. Activity in excised leaves
transcript levels of OsHXK6 is increased markedly by the treatment with glucose or fructose, for 12 and 24 h. Activity in excised leaves
ZEBRA2 is predominantly expressed in mesophyll cells of mature leaves
-
accumulates in leaf mesophyll cells when exposed to 15°C for 4 days in dark conditions
ZEBRA2 is predominantly expressed in mesophyll cells of mature leaves
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660237, 666613, 670596, 682457, 702893, 720325, 723504, 728794, 730149, 730459, 730610, 732631, 732633, 736844, 736971, 737038, 746223, 756999, 757815, 762120
isoenzyme OsMIPS1-3: OsMIPS1-3 shows a more or less constitutive expression in different abiotic stresses in shoots, roots, panicle stages, and various developing seed stages
found in all plant tissues excepting roots, and the transcript is detected at higher abundance in young, healthy leaves than in other tissues
-
the enzyme is specifically expressed in anthers, with an expressional peak at the bicellular pollen stage
in the anther strong expression of OsCIN2, in the ovary strong expression of OsCIN2, in the caryopsis day 4 strong expression of OsCIN2 (strong in vascular parenchyma of chalazal vein, weak in cross-cells, nucellar tissue, endosperm, and lateral vein, and not in pericarp), in the caryopsis day 7 strong expression of OsCIN2 (strong in vascular parenchyma of chalazal vein xylem and aleurone layer, weak in vascular parenchyma of chalazal vein phloem, cross-cells, nucellar projection, inner endosperm, very weakly in pericarp and nucellar epidermis), in the caryopsis day 15 very middle strong expression of OsCIN2, in the caryopsis day 25 almost no expression of OsCIN2
in the anther very strong expression of OsCIN3, in the ovary strong expression of OsCIN3, in the caryopsis day 4 strong expression of OsCIN3 (strong in vascular parenchyma of chalazal vein phloem, cross-cells, nucellar epidermis, endosperm, and lateral vein, weak in vascular parenchyma of chalazal vein xylem, nucellar projection, nucellus, and pericarp), in the caryopsis day 7 strong expression of OsCIN3 (strong in vascular parenchyma of chalazal phloem and aleurone layer, weak in vascular parenchyma of chalazal vein, cross-cells, nucellar projection, epidermis, and endosperm), in the caryopsis day 15 very weak expression of OsCIN3, in the caryopsis day 25 almost no expression of OsCIN3
in the anther weak expression of OsCIN1, in the ovary strong expression of OsCIN1, in the caryopsis day 4 strong expression of OsCIN1, in the caryopsis day 7 strong expression of OsCIN1, in the caryopsis day 15 very weak expression of OsCIN1, and in the caryopsis day 25 almost no expression of OsCIN1
A2XFI3, A2XN40, A2Z7C4, A3C4N5, E7EC32, H6TFZ4, O64454, P14655, P17814, P30298, P31924, P53683, P53684, P93416, Q06C47, Q10LP5, Q10MI9, Q10PV5, Q2KNB5, Q2KNB9, Q42982, Q43009, Q5VRH3, Q5W676, Q5Z6G7, Q5Z6H1, Q5Z6H3, Q67W82, Q69XR7, Q6ETN3, Q6K973, Q6SZS7, Q6T5D1, Q6Z398, Q6ZAC1, Q6ZAN9, Q6ZD89, Q6ZGW6, Q6ZH29, Q75PK6, Q75PK7, Q75WV3, Q76BW5, Q7XBU8, Q7XEM9, Q7XN11, Q7XN12, Q7XR61, Q8LH82, Q8VYH7, Q8W3J0, Q9FRT2, Q9LKF8, Q9SNN0, Q9XGP7
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391450, 391495, 491402, 639733, 639737, 639818, 643284, 645457, 653437, 657088, 660146, 660231, 660237, 660258, 663098, 663764, 666593, 666683, 670544, 670596, 670777, 675589, 675662, 676572, 676714, 678891, 679760, 681242, 681609, 681612, 681617, 682443, 682466, 685731, 688645, 688653, 689557, 689782, 699272, 699801, 700650, 700843, 700855, 700859, 702893, 703847, 705651, 706344, 706563, 710294, 713233, 720325, 720659, 723191, 723378, 723504, 725954, 726192, 728463, 728470, 728512, 728794, 729635, 730149, 730459, 732631, 732633, 734020, 734388, 734425, 734934, 734979, 735232, 736844, 737032, 737038, 737044, 737055, 738923, 739307, 739333, 739374, 739628, 740906, 741281, 742602, 742994, 746968, 748920, 751846, 751922, 754915, 756921, 756999, 757815, 759685, 759800, 759920, 762120, 762702, 764255
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accumulates in root epidermis cells when exposed to 15°C for 4 days in dark conditions
ACR2.2 is observed only in roots following arsenate exposure
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activity in roots increases after treatment of rice seedlings with 276 mM mannitol for 5 days
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existence of the enzyme in the companion cells, which are adjacent to the sieve elements, of the central cylinder in rice roots is advantageous for the access and efficient utilization of glutamine and carbohydrate transported through the sieve elements under anaerobic conditions
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expressed at the lateral root tip, but not detected in the elongation zone of the crown roots
expressed in Fe-deficient roots and shoots and also in Fe-sufficient shoots
GDH detected in the region of the apical meristem and cortical cells in the tip region and elongation zone of the roots in both untreated and NH4Cl-treated plants, GDH3 barely detectable in leaf blades, leaf sheaths, spikelets and roots
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in root tissues the isoform Leg1 has the greatest mRNA levels, whereas Leg2 has the lowest ones
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intense up-regulation of transcripts during increasing abscisic acid formation upon salt treatment and drought
isoenzyme OsMIPS1-1: expression is largely responsive to abiotic stress in the root tissue, its expression is induced by drought, NaCl, cold, abscisic acid, brassinosteroid and salicylic acid
isoenzyme OsMIPS1-2: low expression expression comparable to splice varian OsMIPS1
isoenzyme OsMIPS1-3: OsMIPS1-3 shows a more or less constitutive expression in different abiotic stresses in shoots, roots, panicle stages, and various developing seed stages
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isoforms PT1, PT2, PT3, PT4, PT5, PT6, PT8, PT9 and PT10 are preferentially expressed in roots
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mainly expressed in roots, paricularly in the elongation zone of wild-type plants, OsGNA1 transcripts are scarcely detected in roots of mutant NB208
mainly in root of seedling grown under phosphorous deprivation conditions
MMSDH expression is induced in auxin-stimulated and zinc-stimulated root formation
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of seedling, especially in the apical region. Aldolase physically associates with vacuolar H+-ATPase in roots
of seedlings. NaCl-enhanced expression of OsAPx8 in rice roots is mediated through an accumulation of abscisic acid. Na+ but not Cl- is required for enhancing OsAPx8 expression. H2O2 is not involved in the regulation of NaCl-induced OsAPx8 expression in rice roots
of seedlings. No significant increase due to NaCl can be detected in the expression of OsAPx1
of seedlings. No significant increase due to NaCl can be detected in the expression of OsAPx2
of seedlings. No significant increase due to NaCl can be detected in the expression of OsAPx3
of seedlings. No significant increase due to NaCl can be detected in the expression of OsAPx4
of seedlings. No significant increase due to NaCl can be detected in the expression of OsAPx5
of seedlings. No significant increase due to NaCl can be detected in the expression of OsAPx6
of seedlings. The expression of OsAPx7 is not affected by 150 mM and 200 mM NaCl, but is 40% decreased by 300 mM NaCl
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OscZOG1 is highly expressed in primary root meristem and lateral root primordia. Expression patterns of OscZOG1 during lateral root initiation, overview
OsNAAT1, but not OsNAAT2-6, is strongly up-regulated by Fe deficiency, both in roots and shoots
OsNAAT1, but not OsNAAT2-6, is strongly up-regulated by Fe deficiency, both in roots and shoots. OsNAAT1 is expressed in companion and pericycle cells adjacent to the protoxylem of Fe-sufficient roots
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OsNAS1 and OsNAS2 transcripts are detected in Fe-sufficient roots, very low in roots of Fe-sufficient plants. OsNAS3 transcript is very low in roots of Fe-sufficients plants. OsNAS3 expression is induced in response to Fe deficiency. OsNAS1 and OsNAs2 are expressed in Fe-sufficient roots in companion cells and pericycle cells adjacent to the protoxylem. With Fe deficiency, OsNAS1 and OsNAS2 expression extends to all root cells along with an increase in phytosiderophore secretion. OsNAS3 expression is restricted to the pericycle and companion cells of the roots, irrespective of Fe status
OsNAS3 is widely expressed in roots, especially in vascular bundle, epidermis, exodermis, stem, and old leaf tissues under Fe excess compared to control plants
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roots and the root-shoot junctions, expression in epidermal, cortical, and stele cells, OsPht1;1 is one of the 13 Pht1 Pi transporters in rice, expressed abundantly and constitutively in various cell types of both roots and shoots independent of phosphate supply condition
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roots of seedlings: root tips and area where the secondary roots are actively developing, enzyme in the central cylinder, apical meristem and the primordia of secondary roots of seedlings grown for 26 d in water, supply with 1 mM ammonium ions for 24 h increases the enzyme content in the epidermis and exodermis of the root surface
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strongly induced in adventitious roots and in the youngest internode of partially submerged plants
the enzyme is expressed as 800 nt and 900 nt transcripts. Whereas the 900 nt transcript is present in both root and leaf mRNA, the 800 nt transcript is only detectable in root mRNA
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shorter than 10 mm, supply with 1 mM ammonium ions for 24 h increases the enzyme content in the epidermis and exodermis cells of the root surface
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cytosolic mRNA of OsPPDKB is induced in the reproductive organs after pollination, and greatly increases until about 10 days after fertilization. This mRNA is localized mainly in the endosperm, aleurone, and scutellum of the developing kernel
strong expression in the epidermal layer of the scutellum of 10-DAP embryos
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3829, 30845, 34738, 208622, 285561, 393261, 393284, 393310, 439274, 485615, 485618, 488547, 488552, 488566, 488578, 488911, 642335, 643144, 643153, 643158, 655932, 656917, 676721, 681609, 688645, 694762, 702893, 704879, 706180, 706256, 706773, 720325, 723378, 725954, 734934, 737055, 739288, 742051, 756999, 757492, 757817, 765649
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activity and expression level of branching enzyme 1 and branching enzyme 3 are lower at 29°C/35°C than those at 22°C/28°C. The decreased activity of starch branching enzyme reduces the branching frequency of the branches of amylopectin, which results in the increased amount of long chains of amylopectin of endosperm in rice grain at high temperature
developing endosperm, expression of the OsPUL gene encoding a pullulanase-type debranching enzyme during seed development and germination in rice, the OsPUL promoter actively functions in the late stage of seed germination, overview
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developing seed, increasing level at 3 to 5 days after pollination followed by decreasing for 15 days, Northern blot
DNA MTase activity is remarkably increased during imbibing dry seeds
expression level of OsUXS2 is high during development of seed
expression level of OsUXS3 is consitently high during development of seed
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expression of ABA8ox3 is greatest among the three ABA8ox genes, while ABA8ox1 is hardly detected during germination
germinating rice, enzyme location in the embryo, aleurone layer and surrounding tissues, and in the radicle and shoot after germination
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in grain-filling seeds, expression of isoforms OsPTR4, OsPTR7 and OsPTR8 increases from early to late stages of seed development and that of OsPTR2, OsPTR3 and OsPTR6 decreases
isoenzyme OsMIPS1-1: expression during seed development comparable to splice variant OsMIPS1: Seed of 20 DAP stage has the highest expression followed by 10 and 30 DAP stages
isoenzyme OsMIPS1-2: expression during seed development comparable to splice variant OsMIPS1: Seed of 20 DAP stage has the highest expression followed by 10 and 30 DAP stages
isoenzyme OsMIPS1-3: OsMIPS1-3: expression during seed development comparable to splice variant OsMIPS1: Seed of 20 DAP stage has the highest expression followed by 10 and 30 DAP stages
isoenzyme OsMIPS1: expression largely seed-specific: Seed of 20 DAP stage has the highest expression followed by 10 and 30 DAP stages
loss of Pho1 causes smaller starch granules to accumulate and modifies the amylopectin structure. Pho1 plays a crucial role in starch biosynthesis in rice endosperm at low temperatures. One or more other factors can complement the function of Pho1 at high temperatures
OsHXK7 is expressed preferentially in seed coats. After the treatment with glucose or fructose, the expression of OsHXK7 is reduced significantly in immature seeds
OsHXK8 transcripts level remains high during the starch-filling phase. Immature seed
OsLOX1 transcripts are detected at low abundance in immature seeds and newly germinated seedlings, but accumulate rapidly and transiently in response to wounding or brown planthopper attack, reaching a peak 3 h after wounding and 6 h after insect feeding
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PI3K regulates NADPH oxidase activity through modulating the recruitment of Rac-1 to plasma membrane and accelerates the process of rice seed germination
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pullulanase from germinating and nongerminating seed are the same protein
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seedlings of one and two weeks. When putting two weeks old seedlings under submerge conditions, enzyme activity rises steadily and reaches a maximum after 144 h and declines thereafter
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the content of amylose in SA418 grain is higher than Tainung 67 and SA419 grains throughout the entire grain filling period, possibly due to its superiority to synthesize amylose through GBSS
the expression level of the r9-LOX1 gene is higher in imbibed seeds rather than developing seeds
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the SSI activity of an indica rice variety, Kasalath, is significantly lower than that of a japonica rice variety, Nipponbare. The low activity in Kasalath is maintained during seed development The low expression of SSI in Kasalath is controlled at the transcription levels of SSI mRNA
transcript increases gradually from the ovaries prior to pollination up to 56 days after flowering, following which it decreases. Immature seed
transcript level increases gradually from the ovaries prior to pollination up to 5-6 days after flowering, following which it decreases, HXK6
transcript level increases gradually from the ovaries prior to pollination up to 5-6 days after flowering, following which it decreases. Immature seed
transcript level increases gradually from the ovaries prior to pollination up to 56 days after flowering, following which it decreases, HXK6. Immature seed
transcript level increases gradually from the ovaries prior to pollination up to 56 days after flowering, following which it decreases. Immature seed
transcript level of OsHXK9 increases gradually from the ovaries prior to pollination up to 56 days after flowering, following which it decreases. Immature seed
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variety Kitake of rice, early cellularization stages of syncitial-endosperm during seed development, separated analysis of pericarp, embryo and aleurone and seed embryo, regulatory phosphorylation of PPDK in the non-green seed embryo and in green outer pericarp layer, no regulatory phosphorylation of PPDK in the endosperm and aleurone layer, pool of inactive PPDK in mature seed most abundant, immunoblot analysis, PPDK assay, inhibition assay
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A2XFI3, A2YQL4, B1Q3J6, I4DHV7, O82706, P14655, P48642, Q05JG2, Q0IP69, Q0J185, Q10LH0, Q5Z6G7, Q5Z6H1, Q5Z6H3, Q6ETN3, Q6H6C7, Q6SZS7, Q6Z4G3, Q6ZAN9, Q6ZDE3, Q6ZI95, Q75WV3, Q76BW5, Q7XBU8, Q7XEM9, Q7Y1I7, Q84U74, Q8GV28, Q8GV29, Q8GV30, Q8H8T0, Q8S9P4, Q8VYH7, Q8W5G9, Q9FPK6, Q9FRT2, Q9M5J1, Q9SNN0
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4078, 4376, 34353, 209402, 209404, 391871, 391926, 392879, 393219, 642095, 654503, 656625, 656974, 657088, 660231, 660237, 666664, 670544, 672870, 675122, 675666, 676572, 681139, 681612, 681617, 682292, 682443, 682466, 685731, 689492, 689557, 693422, 694776, 699801, 700650, 700843, 701033, 702770, 703076, 703883, 706274, 709698, 712627, 713308, 720560, 726192, 728470, 729635, 730589, 730610, 732633, 734546, 734547, 736844, 736847, 737038, 739288, 739301, 739363, 742995, 743606, 746105, 746223, 748935, 750003, 750861, 751846, 756921, 756999, 757482, 759588, 759685, 759944, 759994, 761740, 765812
expression is induced by benzothiadiazole, and by infection with Magnaporthe grisea. In benzothiadiazole-treated rice seedlings, expression is induced earlier and at a higher level than in water-treated control seedlings after inoculation with Magnaporthe grisea
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expression of Fe homeostasis-related genes in wild-type and transgenic overexpressing seedlings, overview
feeding experiments with external L-phenylalanine, accumulation of L-trytophan
mainly in root of seedling grown under phosphorous deprivation conditions
OsCIN3 is more constitutively expressed in all sink and source tissues
OsLOX1 transcripts are detected at low abundance in immature seeds and newly germinated seedlings, but accumulate rapidly and transiently in response to wounding or brown planthopper attack, reaching a peak 3 h after wounding and 6 h after insect feeding
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root of seedling, increase in enzyme activity after treatment with NaCl or H2O2, inhibition of enzyme accumulation by diphenyleneiodinium chloride or imidazole, but not by dimethylthiourea
root. NaCl-enhanced expression of OsAPx8 in rice roots is mediated through an accumulation of abscisic acid. Na+ but not Cl- is required for enhancing OsAPx8 expression. H2O2 is not involved in the regulation of NaCl-induced OsAPx8 expression in rice roots
root. No significant increase due to NaCl can be detected in the expression of OsAPx1
root. No significant increase due to NaCl can be detected in the expression of OsAPx2
root. No significant increase due to NaCl can be detected in the expression of OsAPx3
root. No significant increase due to NaCl can be detected in the expression of OsAPx4
root. No significant increase due to NaCl can be detected in the expression of OsAPx5
root. No significant increase due to NaCl can be detected in the expression of OsAPx6
root. The expression of OsAPx7 is not affected by 150 mM and 200 mM NaCl, but is 40% decreased by 300 mM NaCl
strong expression of OsCIN1 (sink and source tissues)
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the enzyme is consistently active in the seedlings submerged from 12 h to 72 h
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transcript levels of both Os6PGDH1 and Os6PGDH2 are up-regulated in rice seedlings under drought, cold, high salinity and abscisic acid treatments
A2XFI3, B1Q3J6, C7AU21, E7EC32, H6TFZ4, I4DHV7, P30298, P31924, Q05JG2, Q0J185, Q10LP5, Q10RB4, Q10SX6, Q336V5, Q43009, Q6H6C7, Q6K973, Q6ZDE3, Q6ZI95, Q75WV3, Q7XEM9, Q7Y1I7
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660237, 660258, 679760, 681612, 682443, 682457, 689492, 694407, 699272, 701033, 706274, 706344, 720659, 720674, 723191, 726192, 729635, 730589, 732631, 732633, 734388, 734425, 734546, 737038, 737044, 739288, 742602, 751846, 754915, 756999, 757979, 759588
although the OsNTRC gene is expressed in roots and shoots of seedlings, the protein is exclusively found in shoots and mature leaves
expressed in Fe-deficient roots and shoots and also in Fe-sufficient shoots
isoenzyme OsMIPS1-2: low expression expression comparable to splice varian OsMIPS1
isoenzyme OsMIPS1-3: OsMIPS1-3 shows a more or less constitutive expression in different abiotic stresses in shoots, roots, panicle stages, and various developing seed stages
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isoforms PT1, PT2, PT3, PT4, PT5, PT7, PT8, PT6, and PT12 are expressed in shoots
OsNAAT1, but not OsNAAT2-6, is strongly up-regulated by Fe deficiency, both in roots and shoots
OsNAAT1, but not OsNAAT2-6, is strongly up-regulated by Fe deficiency, both in roots and shoots. OsNAAT1 expression is observed in the companion cells of Fe-sufficient shoots
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OsPht1;1is one of the 13 Pht1 Pi transporters in rice, expressed abundantly and constitutively in various cell types of both roots and shoots independent of phosphate supply condition
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during early developmental stages of spikelets, the strong hybridization signals are observed in floral meristem (FM) and the primordia of glumes, palea and lemma in out whorls While the stamen primordia are continuing to grow, OscZOG1 expression concentrates on the remaining tissue of the central meristem and developing stamens. At a late stage of spikelet development, the strong hybridization signals are observed in anther locules and filaments
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during the ripening of the spikelets AS contents increases during the first 21 days after flowering, then declines rapidly
A2XN40, A3C4N5, O64454, P14655, P17814, P93416, Q0JFI2, Q42982, Q53WJ1, Q5VRH3, Q653T6, Q67W82, Q69XR7, Q6ETN3, Q6ZAC1, Q6ZGW6, Q6ZH29, Q7XN11, Q7XN12, Q9LKF8, Q9XGP7
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639818, 660237, 666683, 675662, 676572, 681242, 682374, 682466, 682960, 688645, 700855, 700859, 704891, 710294, 713233, 720325, 725954, 726261, 728463, 728470, 728512, 728794, 730149, 737038, 751879, 751922, 754915, 756999, 757815, 759800, 762120
Adc2 expression is restricted to stem tissue, Adc1 is expressed in leaf, root and stem
in epidermis cells and sheath parenchyma cells, in which no lignin is being synthesized
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OMT-17 is expressed in stems only, OMT-15 is expressed higher in stem and roots than in other tissues
OsNAS3 is widely expressed in roots, especially in vascular bundle, epidermis, exodermis, stem, and old leaf tissues under Fe excess compared to control plants
the enzyme is primarily expressed in rice culm basal internodes
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the transcript level increases after 3 h of low-temperature exposure, reaching a maximum at 12 h
in the shoot strong expression of OsCIN1, in the root strong expression of OsCIN1, in the sink leaf blade strong expression of OsCIN1, in the source leaf blade weak expression of OsCIN1, in the leaf sheath weak expression of OsCIN1, in the internode weak expression of OsCIN1
in the shoot strong expression of OsCIN3, in the root strong expression of OsCIN3, in the sink leaf blade very strong expression of OsCIN3, in the source leaf blade strong expression of OsCIN3, in the leaf sheath strong expression of OsCIN3, in the internode strong expression of OsCIN3
in the shoot weak expression of OsCIN2, in the root weak expression of OsCIN2, in the sink leaf blade strong expression of OsCIN2, in the source leaf blade no expression of OsCIN2, in the leaf sheath no expression of OsCIN2, in the internode strong expression of OsCIN2
additional information
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addition of acetate (0.1-10 mM) to culture medium of rice seedlings does not increase the content of poly-3-hydroxybutyrate in the rice root or leaf. Enzyme activity is not clearly detectable in rice seedlings
additional information
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APX activity is highest in the leaf blades and tends to be higher in older than in younger plant parts
additional information
both isoforms Ugp1 and Ugp2 are ubiquitously expressed throughout rice development, with Ugp1 at much higher levels than Ugp2
additional information
cultivar/tissue specific expression of L-2, the expression is generally much higher in active bran/seed than in stabilized bran, mature seeds, and regenerated plants
additional information
cultivar/tissue specific expression of RCI-1, which is barely expressed in seeds
additional information
developmental distribution of isozyme expression in rice tissues, overview
additional information
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enzyme is specifically expressed in the outermost cell layer of young lateral organs
additional information
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enzyme is translated in sclerenchyma cells and transported to the root surface through epidermal and exodermal cells
additional information
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enzyme OsKASI is ubiquitously expressed in various tissues throughout the plant
additional information
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enzyme subunit YL-1 protein localizes in chloroplasts, and is mainly expressed in green tissues, with greatest abundance in leaves and young panicles
additional information
expression of Eui is tightly regulated during plant development with the stagespecific eui phenotypes, overview
additional information
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expression patterns of OsASL1.1 and OsALS1.2, abundance of OsALS1.2 is much lower than that of OsASL1.1 in either tissue, overview
additional information
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expression patterns of rice GST genes in various tissues/organs and developmental stages, overview
additional information
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genes OsPLDalpha1, OsPLDalpha5, and OsPLDbeta1 are highly expressed in most tissues. Expression patterns of PLD genes in rice cell culture, and roots, leaf sheaths, leaf blades, and immature seeds under normal growth conditions
additional information
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highest activity was observed in germinating tissues, young culm, and spikelets, where cells are actively elongating. PMEs exhibit spatial- and stress-specific expression patterns during rice development. Rice PMEs and tissue-specific transcriptional analysis, overview
additional information
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in photosynthetic tissue, undetectable in non-photosynthetic tissues
additional information
in vivo expression and response pattern of PP2A gene to environmental stress
additional information
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isoform PSY3 transcript levels show almost no tissue-specific differences and are not affected by light. Transcripts are up-regulated during increasing abscisic acid formation upon salt treatment and drought, with simultaneous induction of genes encoding 9-cis-epoxycarotenoid dioxygenases
additional information
isoform ROMT-15, expression in all tissues investigated
additional information
isozyme NPP1 is widely expressed in shoots, young roots, scutella, mature leaves and roots, but not in calli
additional information
isozyme NPP6 is expressed in the whole plant and also in calli
additional information
microarray-based gene expression profile of all 10 MTases during 22 stages and tissues that include 14 stages of reproductive development and five vegetative tissues together with three stresses, cold, salt and dehydration stress, revealing specific windows of MTase activity during panicle and seed development, overview
additional information
mRNA and protein contents of GS isoforms, overview
additional information
no detection of endogenous transcript for OsHXK1 in the various samples from leaves, roots, flowers, immature seeds, or sugar-treated or rice-blast-infected leaves
additional information
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no expression in epidermis, vascular bundles, or guard cells
additional information
only the OsMET1-1 mRNAis slightly accumulated in young leaves, in which virtually no OsMET1-2 transcripts is detectable
additional information
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Oryza sativa variety Njavara contains a high content of tricin
additional information
Os4CL3 is expressed in thickening vascular cells and non-thickening parenchyma cells throughout rice growth, immunohistochemic in situ analysis, quantitative reverse transcription-PCR expression analysis of isozymes during growth and development, overview
additional information
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OscZOG1 is preferentially expressed in shoot and root meristematic tissues and nascent organs. Th strong hybridization signals in the meristematic tissues of inflorescence suggests that OscZOG1 expression is targeted to cells in rapidly growing regions. The early activation of OscZOG1 expression in SAM, leaf primordia and young leaves suggest that OscZOG1 may play a critical role in early seedling growth
additional information
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OsPPCK1 are highly expressed in roots and at low levels in other organs
additional information
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OsPPCK3 is highly expressed in roots and at low levels in other organs
additional information
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quantitative PCR expression analysis of OsHPL3, overview
additional information
quantitative real-time PCR analysis of the expression pattern of the OsPUL gene in different tissues as well as in seeds at different developmental stages, overview
additional information
quantitative reverse transcription-PCR expression analysis of isozymes during growth and development, overview
additional information
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subunit YGL8 is constitutively expressed in various tissues, with more abundance in young leaves and panicles
additional information
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temperature- and light-dependent enzyme activity and melatonin biosynthesis in rice plants, overview. The enzyme activity is increased at higher Temperature of 55°C and at darkness
additional information
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the expression pattern of OsPT1 is constitutive independent of phosphate supply, expression analysis of OsPT1 by semi-quantitative RT-PCR
additional information
the F2 mapping population is generated from a cross between osgpat3 (japonica) and GuangLuAi 4 (wild-type, indica) for gene mapping. Male sterile plants in the F2 population are chosen for gene mapping. Quantitative reverse-transcription real-time PCR assay and in situ hybridization
additional information
tissue-specific and growth stage-dependent isozyme expression patterns, negligible expression in shoot, overview
additional information
tissue-specific expression analysis
additional information
tissue-specific expression analysis, SUS2 is widely expressed in tissues
additional information
tissue-specific expression analysis, SUS3 is predominantly expressed in the caryopsis
additional information
tissue-specific expression analysis, SUS4 is predominantly expressed in the caryopsis
additional information
tissue-specific expression analysis, SUS5 is widely expreesed in tissues at low level and is suppressed in germinating shoots under submergence
additional information
tissue-specific expression analysis, SUS6 is widely expressed in tissues at low levels and is suppressed in germinating shoots under submergence
additional information
tissue-specific expression of isozymes
additional information
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tissue-specific expression of isozymes at flowering and during drought or heat stress, overview
additional information
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transcript levels not influenced by reduced temperature (4°C), high salt (100 mM NaCl) or 72 h treatment with 100 micromolar kinetin, 100 micromolar gibberellic acid or 50 micromolar alpha-naphthalene acetic acid
additional information
transcripts are detected throughout the whole plant body except the endosperm
additional information
two of the four genes are more highly expressed in the vegetative organs tested, but exhibit a different pattern during seed maturation
additional information
very high transcript abundance for OsPgk2 is noted at all the developmental stages, especially at two most stress sensitive developmental stages, i.e. seedling and reproductive stage. High levels of OsPGK2 protein are detected in shoots of Pokkali even under non-stress conditions while the salinity-sensitive cv. IR64 does not show detectable levels even after 24 h of salinity stress
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
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in the absence of nucleotides, 75% of K16 is associated with microtubules. In presence of ADP and ATP, 55% and 65%, respectively, are associated
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in transgenic rice protoplasts expressing Sec24, isoform PMA2 is packaged into SEC24 vesicles after export from the ER. SEC24 vesicles, along with plasma membrane H+-ATPases stimulate roots formation under iron deficiency by enhancing rhizosphere acidification
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additional information
OsPAO7 seems to remain in a peripheral layer of the plant cell with the aid of its predicted signal peptide and transmembrane domain
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A4GUA1, A8CF65, B6RGY0, C7AU21, O64437, P0C512 and Q0INY7, Q10LH0, Q27PX2, Q5VNN5, Q5VRJ6, Q6K848, Q6Z1Y6, Q6Z3Y3, Q6ZH29, Q70G58, Q75HZ9, Q7XEM9, Q7XN11, Q7XN12, U3PTC5
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3705, 94290, 392018, 649483, 652653, 653554, 659399, 660146, 664564, 668202, 676479, 677564, 679977, 689593, 689623, 693851, 694629, 697943, 700712, 705951, 706252, 706308, 706390, 706563, 714099, 716544, 716602, 720325, 720674, 726192, 728152, 728463, 730149, 737013, 737055, 738762, 743974, 746105, 746223, 748471, 757480, 757482, 759275, 759944, 759994, 761880, 762120
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CPD photolyase functions in chloroplasts. Nuclei and chloroplasts have a relatively high proportion of the phosphorylated protein form
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greatly increased Protox activity in transgenic rice as compared to wild-type
isozyme NPP1 contains a plastid-targeting signal
NPP1 is targeted to plastids of rice cells. Membrane trafficking from the enoplasmic reticulum to the Golgi apparatus is essential for the plastid targeting of NPP1
the enzyme contains a transit peptide-like sequence at the N-terminus
the enzyme sequence contains a putative N-terminal chloroplastic signal peptide
the N-termini of isozymes AGPL1, AGPL3, and AGPL4 contain a putative transit peptide, the proteins are targeted to the plastid stroma
transient expression of GFP fused to the 184 N-terminal amino acids of the OspCKII sequence in rice confirmed the chloroplastic localization of the kinase, subcellular localization analysis. Plastid CKII has a very low abundance. The N-terminal extension of LOC_Os03g55490 functions as a plastid transit peptide in vivo
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plastidic isozyme, associated with the chloroplast envelope
NYC1 is a transmembrane protein with three transmembrane domains
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the YGL8 subunit contains a chloroplast transit peptide
B3VMC0, B3VMC1, B3VMC2, Q1WM16, Q2KNB4, Q2KNB5, Q2KNB7, Q2KNB9, Q5N942, Q5W676, Q6Z1Y6, Q6Z398, Q6ZD89, Q851K9, Q8LH82, Q8LQ68, Q9ZTS1
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650978, 673963, 689474, 691512, 706180, 712627, 721777, 730459, 732633, 734389, 734546, 734547, 737038, 741154, 743460, 757324, 757480, 757482, 759921
A0A0K0K9B1, O64437, O82706, Q0DZ46, Q10N21, Q53NG8, Q69P84, Q6H627, Q6ZH29, Q7XN11, Q7XN12, Q7XR89, Q8H8T0, Q9FE01, Q9FRX7, Q9FW31, Q9LRE9, Q9LRI6, Q9SE42
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3705, 488547, 642615, 643724, 645457, 652548, 652903, 653554, 658355, 663092, 663275, 664564, 669969, 676401, 676511, 680419, 689513, 692050, 698095, 703847, 703883, 706390, 713363, 715830, 720325, 723351, 726208, 734426, 734992, 746008, 759685, 759920, 763097, 763605, 764255
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cytosolic mRNA of OsPPDKB is induced in the reproductive organs after pollination, and greatly increases until about 10 days after fertilization
isozyme AGPL2 lacks an apparent transit peptide
seed-specific small subunit OsAGPS2b, and large subunit OsAGPL2
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amino acid sequence possesses a C-terminal signal for endoplasmic reticulum retention
the EUI protein is anchored on the endoplasmic reticulum towards the cytoplasm
the N-terminus of OsGPAT3 is not a signal peptide
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extracellular in healthy tissues, shifts to cytoplasm upon programmed cell death induction
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mainly associated with the Golgi apparatus and moves rapidly and extensively along the cytoskeleton
enzyme contains a putative membrane-binding region
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NYC1 isoform has three putative membrane-spanning domains, while NOL does not contain any predictable membrane-spanning domains
AK103274, B6RGY0, O24174, Q0DHN6, Q0DZ46, Q1WM16, Q2KNB4, Q2KNB5, Q2KNB7, Q2KNB9, Q53NG8, Q5VNN5, Q5W676, Q653T6, Q69P84, Q6ESJ0, Q6H627, Q6Z398, Q6Z4E4, Q6ZH29, Q7XEM9, Q7XN11, Q7XN12, Q7XR89, Q84LK3, Q851K9, Q8LH82, Q8LQ68, Q9FRX7, Q9LRE9, Q9LRI6
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289165, 664564, 670544, 671351, 673963, 676465, 676511, 691085, 692050, 693422, 698095, 700712, 704891, 705651, 706356, 720325, 721777, 726192, 726208, 726239, 734401, 739265, 759921
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CPD photolyase functions in mitochondria. Mitochondria show a high proportion of non-phosphorylated CPD photolyase
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greatly increased Protox activity in transgenic rice as compared to wild-type
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isoenzyme AAT-2: major isoenzyme in mitochondria and peroxisomes
isoform SPS1 shows a putative mitochondrial signal peptide sequence
Q01I44, Q1WM16, Q2KNB4, Q2KNB5, Q2KNB7, Q2KNB9, Q53WJ1, Q5N942, Q5W676, Q60GC1, Q6Z398, Q8LH82, Q8LQ68
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CPD photolyase functions in nuclei. Nuclei and chloroplasts have a relatively high proportion of the phosphorylated protein form
OsHCI1 may accumulate in the nucleus under high temperatures
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AAT-2: major isoenzyme in mitochondria and peroxisomes, very low activity of AAT-1
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confocal immunofluorescence microscopy reveals that capsid protein P8 is colocalized with GOX in peroxisomes
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PHT1 transporters show a topology with 12 membrane-spanning domains, which are separated into two groups of six domains by a charged hydrophilic loop. Both C- and N-termini are expected to be oriented inside the cell, with the protein inserted in the plasma membrane
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transmembrane structure, the catalytic site of cellulose synthase faces the cytosol, two polypeptides with their catalytic sites juxtapose to form a functional enzyme unit solving the problem of having to rotate the chain by 180° after each glucosyl residue addition, overview
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649483, 653260, 660237, 676558, 689473, 704891, 739265, 739333, 748330, 758222, 759275, 759921, 762120
deduced from the existence of a transit peptide sequence
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exclusively plastidial location, various forms of plastids in cells of epidermis and exodermis, in the cortex parenchyma and vascular parenchyma of root tips, epidermis and exodermis cells contain more plastids and much higher enzyme concentration than other root cells
Golgi-to-plastid traffic appears to be involved in the transport of glycoproteins to plastids
isoform SPS2 shows a putative transit peptide of 57 amino acids for plastidal localization at the N-terminus
large subunit isoforms OsAGPL1, OsAGPL3, OsAGPL4 and both small subunit isoforms OsAGPS1, OsAGPS2
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NOL is localized on the stromal side of the thylakoid membrane despite the lack of a transmembrane domain. NOL and NYC1 interact physically in vitro, NOL and NYC1 are co-localized in the thylakoid membrane and act in the form of a complex as a chlorophyll b reductase
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NYC1 protein may have three transmembrane spanning domains. NOL is located on the stromal surface of the thylakoid membrane. NYC1 and NOL interact with one another, forming a functional chlorophyll b reductase complex
PDIL1-1 is uniformly distributed in the lumen
PDIL2-3 is localized mainly on the surface of the endoplasmic reticulum
additional information
in contrast to the plant enzyme, the animal LKR/SDH is located in the mitochondria matrix
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additional information
in contrast to the plant enzyme, the animal LKR/SDH localizes in the mitochondria matrix
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additional information
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in general, monoterpene synthases contain a transit peptide for translocation to plastids and sesquiterpene synthases are localized in the cytoplasm
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additional information
no targeting of isozyme NPP3 to plastids
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additional information
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subcellular compartmentalization of pectin methylesterases, overview
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additional information
subcellular localization of AGP isozymes, overview
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additional information
trans-Golgi compartments participate in the Golgi to plastid traffic of NPP1 in rice. NPP-specific activity in the chloroplast preparation is approximately 9fold higher than in crude leaf extracts
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additional information
two of the isozymes function in mitochondria and chloroplasts at similar levels of activity, whereas the second mitochondrial enzyme displays very low activity
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LINKS TO OTHER DATABASES (specific for Oryza sativa)
SILVA: 16S/18S rRNA, 23S/28S rRNA
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Release 2023.1 (January 2023)
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