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Information on Organism Methylorubrum extorquens

Synonyms:
ATCC 43645; "Bacillus extorquens" Bassalik 1913; Bacillus extorquens; CCUG 2084; CIP 106787 [[Methylobacterium dichloromethanicum]]; culture-collection:VKM:B:2064; culture-collection:VKM:B:2191 [[Methylobacterium dichloromethanicum]]; culture-collection:VKM:B:2223 [[Methylobacterium chloromethanicum]]; DSM 1337; DSM 6343 [[Methylobacterium dichloromethanicum]]; "Flavobacterium extorquens" (Bassalik 1913) Bassalik et al. 1960; Flavobacterium extorquens; IAM 12631; IFO 15687; JCM 2802; Methylobacterium chloromethanicum McDonald et al. 2001; Methylobacterium chloromethanicum; Methylobacterium dichloromethanicum Doronina et al. 2000; Methylobacterium dichloromethanicum; Methylobacterium extorquens; Methylobacterium extorquens (Urakami and Komagata 1984) Bousfield and Green 1985 emend. Kato et al. 2008; Methylorubrum extorquens; Methylorubrum extorquens (Urakami and Komagata 1984) Green and Ardley 2018; NBRC 15687; NCCB 78015; NCIB 9399; NCIB:9399; NCIMB 13688 [[Methylobacterium chloromethanicum]]; NCIMB 9399; Protomonas extorquens (ex Bassalik 1913) Urakami and Komagata 1984; Protomonas extorquens; "Pseudomonas extorquens" (Bassalik 1913) Krasil'nikov 1949; Pseudomonas extorquens; strain CM4 [[Methylobacterium chloromethanicum]]; strain DM4 [[Methylobacterium dichloromethanicum]]; strain TK 0001; "Vibrio extorquens" (Bassalik 1913) Bhat and Barker 1948; Vibrio extorquens; VKM B-2064; VKM B-2191 [[Methylobacterium dichloromethanicum]]; VKM B-2223 [[Methylobacterium chloromethanicum]]; Methylobacterium diclorometanicum; NCIMB 13688; strain CM4; VKM B-2223; (in press) Methylorubrum extorquens; Methylorubrum extorquens Green and Ardley 2018;
Word Map for Organism Methylorubrum extorquens
TaxTree of Organism Methylorubrum extorquens
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Proteobacteria can be found in Brenda BRENDA pathways(phylum)
Alphaproteobacteria can be found in Brenda BRENDA pathways(class)
Hyphomicrobiales can be found in Brenda BRENDA pathways(order)
Methylobacteriaceae can be found in Brenda BRENDA pathways(family)
Methylorubrum can be found in Brenda (genus)
Methylorubrum extorquens can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)
-
-
PWY-7726
(8E,10E)-dodeca-8,10-dienol biosynthesis
-
-
PWY-7654
(aminomethyl)phosphonate degradation
-
-
PWY-7805
(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)
-
-
PWY-7216
(S)-lactate fermentation to propanoate, acetate and hydrogen
-
-
PWY-8086
(S)-propane-1,2-diol degradation
-
-
PWY-7013
1,2-dichloroethane degradation
-
-
12DICHLORETHDEG-PWY
1-butanol autotrophic biosynthesis (engineered)
-
-
PWY-6886
10-cis-heptadecenoyl-CoA degradation (yeast)
-
-
PWY-7337
10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
-
-
PWY-7339
10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
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-
PWY-7338
2-deoxy-D-ribose degradation II
-
-
PWY-8058
2-methyl-branched fatty acid beta-oxidation
-
-
PWY-8181
2-methylpropene degradation
-
-
PWY-7778
2-nitrotoluene degradation
-
-
PWY-5641
3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)
-
-
PWY-5531
3-chlorocatechol degradation
-
-
3-hydroxypropanoate cycle
-
-
PWY-5743
3-hydroxypropanoate/4-hydroxybutanate cycle
-
-
PWY-5789
3-methylbutanol biosynthesis (engineered)
-
-
PWY-6871
3-phenylpropanoate degradation
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-
P281-PWY
4-aminobutanoate degradation V
-
-
PWY-5022
4-ethylphenol degradation (anaerobic)
-
-
PWY-6080
4-hydroxybenzoate biosynthesis III (plants)
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-
PWY-6435
4-oxopentanoate degradation
-
-
PWY-7948
6-gingerol analog biosynthesis (engineered)
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-
PWY-6920
9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
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-
PWY-7340
acetaldehyde biosynthesis I
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-
PWY-6333
acetate and ATP formation from acetyl-CoA I
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-
PWY0-1312
acetate fermentation
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-
acetoacetate degradation (to acetyl CoA)
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-
ACETOACETATE-DEG-PWY
acetyl-CoA fermentation to butanoate
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-
PWY-5676
acetylene degradation (anaerobic)
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-
P161-PWY
adenine and adenosine salvage I
-
-
P121-PWY
adenine and adenosine salvage III
-
-
PWY-6609
adenine and adenosine salvage V
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-
PWY-6611
adenosine nucleotides degradation II
-
-
SALVADEHYPOX-PWY
aerobic toluene degradation
-
-
alanine metabolism
-
-
Alanine, aspartate and glutamate metabolism
-
-
alpha-linolenate metabolites biosynthesis
-
-
PWY-8398
alpha-Linolenic acid metabolism
-
-
Amino sugar and nucleotide sugar metabolism
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-
Aminobenzoate degradation
-
-
ammonia oxidation I (aerobic)
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-
AMMOXID-PWY
ammonia oxidation III
-
-
PWY-2242
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
anaerobic energy metabolism (invertebrates, mitochondrial)
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-
PWY-7384
anandamide biosynthesis I
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-
PWY-8051
anandamide biosynthesis II
-
-
PWY-8053
androstenedione degradation I (aerobic)
-
-
PWY-6944
androstenedione degradation II (anaerobic)
-
-
PWY-8152
arachidonate metabolites biosynthesis
-
-
PWY-8397
Arachidonic acid metabolism
-
-
Arginine biosynthesis
-
-
arsenic detoxification (mammals)
-
-
PWY-4202
aspirin triggered resolvin D biosynthesis
-
-
PWY66-395
aspirin triggered resolvin E biosynthesis
-
-
PWY66-394
Atrazine degradation
-
-
bacterial bioluminescence
-
-
PWY-7723
benzoate biosynthesis I (CoA-dependent, beta-oxidative)
-
-
PWY-6443
Benzoate degradation
-
-
benzoyl-CoA biosynthesis
-
-
PWY-6458
beta-(1,4)-mannan degradation
-
-
PWY-7456
beta-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation
-
-
PWY-7586
beta-Alanine metabolism
-
-
Bifidobacterium shunt
-
-
P124-PWY
Biosynthesis of secondary metabolites
-
-
Biosynthesis of unsaturated fatty acids
-
-
butanoate fermentation
-
-
Butanoate metabolism
-
-
butanol and isobutanol biosynthesis (engineered)
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-
PWY-7396
C4 and CAM-carbon fixation
-
-
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
C5-Branched dibasic acid metabolism
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-
Calvin-Benson-Bassham cycle
-
-
CALVIN-PWY
Carbon fixation in photosynthetic organisms
-
-
Carbon fixation pathways in prokaryotes
-
-
Carotenoid biosynthesis
-
-
carotenoid biosynthesis
-
-
catechol degradation to 2-hydroxypentadienoate I
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-
P183-PWY
catechol degradation to 2-hydroxypentadienoate II
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-
PWY-5419
catechol degradation to beta-ketoadipate
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-
CATECHOL-ORTHO-CLEAVAGE-PWY
cellulose biosynthesis
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-
PWY-1001
cellulose degradation
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-
cellulose degradation II (fungi)
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-
PWY-6788
chitin deacetylation
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-
PWY-7118
Chloroalkane and chloroalkene degradation
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-
Chlorocyclohexane and chlorobenzene degradation
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-
chlorophyll metabolism
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-
cholesterol degradation to androstenedione I (cholesterol oxidase)
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-
PWY-6945
cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
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-
PWY-6946
Citrate cycle (TCA cycle)
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-
citric acid cycle
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-
CMP-legionaminate biosynthesis I
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-
PWY-6749
CO2 fixation in Crenarchaeota
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-
conversion of succinate to propanoate
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-
PWY0-43
crotonate fermentation (to acetate and cyclohexane carboxylate)
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-
PWY-7401
crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered)
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-
PWY-7854
cutin biosynthesis
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-
PWY-321
cyanate degradation
-
-
Cyanoamino acid metabolism
-
-
Cysteine and methionine metabolism
-
-
cysteine metabolism
-
-
D-Amino acid metabolism
-
-
d-mannose degradation
-
-
D-xylose degradation IV
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-
PWY-7294
degradation of hexoses
-
-
di-homo-gamma-linolenate metabolites biosynthesis
-
-
PWY-8396
diethylphosphate degradation
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-
PWY-5491
diploterol biosynthesis
-
-
PWY-6098
docosahexaenoate biosynthesis III (6-desaturase, mammals)
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-
PWY-7606
docosahexaenoate metabolites biosynthesis
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-
PWY-8400
Drug metabolism - cytochrome P450
-
-
Drug metabolism - other enzymes
-
-
dTMP de novo biosynthesis (mitochondrial)
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-
PWY66-385
Entner Doudoroff pathway
-
-
Entner-Doudoroff pathway I
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-
PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
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PWY-2221
ethanol degradation I
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-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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-
PWY66-21
ethanol degradation IV
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-
PWY66-162
ethanol fermentation
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-
ethanolamine utilization
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-
PWY0-1477
ethene biosynthesis IV (engineered)
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-
PWY-7126
ethene biosynthesis V (engineered)
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-
PWY-7124
Ether lipid metabolism
-
-
Ethylbenzene degradation
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-
ethylbenzene degradation (anaerobic)
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-
PWY-481
ethylmalonyl-CoA pathway
fatty acid beta-oxidation I (generic)
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-
FAO-PWY
fatty acid beta-oxidation II (plant peroxisome)
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-
PWY-5136
fatty acid beta-oxidation IV (unsaturated, even number)
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-
PWY-5138
fatty acid beta-oxidation VI (mammalian peroxisome)
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-
PWY66-391
fatty acid beta-oxidation VII (yeast peroxisome)
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PWY-7288
Fatty acid degradation
-
-
Fatty acid elongation
-
-
fatty acid salvage
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PWY-7094
fluoroacetate and fluorothreonine biosynthesis
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-
PWY-6644
Fluorobenzoate degradation
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-
Folate biosynthesis
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-
folate polyglutamylation
folate transformations I
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-
PWY-2201
folate transformations II (plants)
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-
PWY-3841
folate transformations III (E. coli)
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-
1CMET2-PWY
formaldehyde assimilation I (serine pathway)
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-
PWY-1622
formaldehyde oxidation VI (H4MPT pathway)
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-
PWY-1723
formaldehyde oxidation VII (THF pathway)
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-
PWY-7909
formate assimilation into 5,10-methylenetetrahydrofolate
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-
PWY-1722
formate oxidation to CO2
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-
PWY-1881
Fructose and mannose metabolism
-
-
fructose degradation
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-
PWY0-1314
Galactose metabolism
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-
gallate degradation III (anaerobic)
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-
P3-PWY
gamma-hexachlorocyclohexane degradation
-
-
GAMMAHEXCHLORDEG-PWY
GDP-mannose biosynthesis
-
-
PWY-5659
Geraniol degradation
-
-
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis III
-
-
PWY66-399
glucose and glucose-1-phosphate degradation
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-
GLUCOSE1PMETAB-PWY
glucose degradation (oxidative)
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-
DHGLUCONATE-PYR-CAT-PWY
glutamate and glutamine metabolism
-
-
glutaryl-CoA degradation
-
-
PWY-5177
glycerol degradation III
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-
PWY-6130
glycerol degradation to butanol
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-
PWY-7003
Glycerolipid metabolism
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-
Glycerophospholipid metabolism
-
-
glycine degradation (reductive Stickland reaction)
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-
PWY-8015
glycine metabolism
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-
Glycine, serine and threonine metabolism
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-
glycogen metabolism
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-
glycolate and glyoxylate degradation II
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-
GLYOXDEG-PWY
glycolysis
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-
Glycolysis / Gluconeogenesis
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-
glycolysis I (from glucose 6-phosphate)
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-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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-
PWY-5484
glycolysis III (from glucose)
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-
ANAGLYCOLYSIS-PWY
glycolysis IV
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-
PWY-1042
glycolysis V (Pyrococcus)
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-
P341-PWY
Glycosaminoglycan degradation
-
-
Glycosphingolipid biosynthesis - ganglio series
-
-
Glyoxylate and dicarboxylate metabolism
-
-
glyoxylate assimilation
-
-
PWY-5744
glyoxylate cycle
-
-
GLYOXYLATE-BYPASS
glyphosate degradation III
-
-
PWY-7807
guanine and guanosine salvage I
-
-
PWY-6620
guanosine nucleotides degradation III
-
-
PWY-6608
heme b biosynthesis II (oxygen-independent)
-
-
HEMESYN2-PWY
heme metabolism
-
-
heterolactic fermentation
-
-
P122-PWY
histidine metabolism
-
-
hopanoid biosynthesis (bacteria)
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-
PWY-7072
icosapentaenoate metabolites biosynthesis
-
-
PWY-8399
incomplete reductive TCA cycle
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-
P42-PWY
indole glucosinolate activation (herbivore attack)
-
-
PWYQT-4476
indole-3-acetate biosynthesis II
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-
PWY-581
indole-3-acetate biosynthesis V (bacteria and fungi)
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-
PWY-5026
indole-3-acetate biosynthesis VI (bacteria)
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-
TRPIAACAT-PWY
inosine 5'-phosphate degradation
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-
PWY-5695
isoprene biosynthesis II (engineered)
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-
PWY-7391
isopropanol biosynthesis (engineered)
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-
PWY-6876
itaconate biosynthesis I
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-
PWY-5750
jasmonic acid biosynthesis
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-
PWY-735
ketogenesis
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-
PWY66-367
ketolysis
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-
PWY66-368
L-alanine degradation II (to D-lactate)
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-
ALACAT2-PWY
L-alanine degradation VI (reductive Stickland reaction)
-
-
PWY-8188
L-arabinose degradation IV
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-
PWY-7295
L-ascorbate biosynthesis VIII (engineered pathway)
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-
PWY-7165
L-glutamate degradation I
-
-
GLUTAMATE-DEG1-PWY
L-glutamate degradation V (via hydroxyglutarate)
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-
P162-PWY
L-glutamate degradation XI (reductive Stickland reaction)
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-
PWY-8190
L-histidine degradation III
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-
PWY-5030
L-homocysteine biosynthesis
-
-
PWY-5344
L-isoleucine degradation I
-
-
ILEUDEG-PWY
L-isoleucine degradation II
-
-
PWY-5078
L-leucine biosynthesis
-
-
LEUSYN-PWY
L-leucine degradation III
-
-
PWY-5076
L-lysine fermentation to acetate and butanoate
-
-
P163-PWY
L-methionine biosynthesis I
-
-
HOMOSER-METSYN-PWY
L-methionine biosynthesis III
-
-
HSERMETANA-PWY
L-methionine degradation III
-
-
PWY-5082
L-methionine salvage from L-homocysteine
-
-
ADENOSYLHOMOCYSCAT-PWY
L-phenylalanine degradation III
-
-
PWY-5079
L-serine biosynthesis II
-
-
PWY-8011
L-threonine degradation I
-
-
PWY-5437
L-tryptophan degradation V (side chain pathway)
-
-
PWY-3162
L-tryptophan degradation VIII (to tryptophol)
-
-
PWY-5081
L-tyrosine degradation III
-
-
PWY3O-4108
L-valine degradation II
-
-
PWY-5057
lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales)
-
-
PWY-8377
leucine metabolism
-
-
linezolid resistance
-
-
PWY-6828
linoleate metabolites biosynthesis
-
-
PWY-8395
Linoleic acid metabolism
-
-
lipid metabolism
-
-
long chain fatty acid ester synthesis (engineered)
-
-
PWY-6873
malate/L-aspartate shuttle pathway
-
-
MALATE-ASPARTATE-SHUTTLE-PWY
maresin biosynthesis
-
-
PWY-8356
Metabolic pathways
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-
metabolism of disaccharids
-
-
Metabolism of xenobiotics by cytochrome P450
-
-
Methane metabolism
-
-
methane metabolism
-
-
methane oxidation to methanol I
-
-
PWY-1641
methanogenesis from acetate
-
-
METH-ACETATE-PWY
methanogenesis from CO2
-
-
methanogenesis from H2 and CO2
-
-
METHANOGENESIS-PWY
methanogenesis from methoxylated aromatic compounds
-
-
PWY-8304
methanol oxidation to carbon dioxide
-
-
PWY-7616
methanol oxidation to formaldehyde I
-
-
PWY-6966
methanol oxidation to formaldehyde II
-
-
PWY-6510
methanol oxidation to formaldehyde IV
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-
PWY-5506
methionine metabolism
-
-
methoxylated aromatic compound degradation II
-
-
PWY-8305
methyl indole-3-acetate interconversion
-
-
PWY-6303
methyl tert-butyl ether degradation
-
-
PWY-7779
methyl-coenzyme M oxidation to CO2
-
-
PWY-5209
methylamine degradation I
-
-
PWY-6967
methylamine degradation II
-
-
PWY-6965
methylaspartate cycle
methylsalicylate degradation
-
-
PWY18C3-24
mevalonate pathway I (eukaryotes and bacteria)
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-
PWY-922
mevalonate pathway II (haloarchaea)
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-
PWY-6174
mevalonate pathway III (Thermoplasma)
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-
PWY-7524
mevalonate pathway IV (archaea)
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-
PWY-8125
Microbial metabolism in diverse environments
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-
mixed acid fermentation
-
-
FERMENTATION-PWY
mycolate biosynthesis
-
-
PWYG-321
mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
-
-
PWY-6397
NAD metabolism
-
-
NAD(P)/NADPH interconversion
-
-
PWY-5083
Naphthalene degradation
-
-
Nicotinate and nicotinamide metabolism
-
-
nitrate assimilation
-
-
nitrifier denitrification
-
-
PWY-7084
nitrite-dependent anaerobic methane oxidation
-
-
PWY-6523
nitrogen fixation I (ferredoxin)
-
-
N2FIX-PWY
Nitrogen metabolism
-
-
nitrogen remobilization from senescing leaves
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-
PWY-6549
non-pathway related
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-
noradrenaline and adrenaline degradation
-
-
PWY-6342
nucleoside and nucleotide degradation (archaea)
-
-
PWY-5532
O-antigen building blocks biosynthesis (E. coli)
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-
OANTIGEN-PWY
O-Antigen nucleotide sugar biosynthesis
-
-
oleandomycin activation/inactivation
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-
PWY-6972
oleate beta-oxidation
-
-
PWY0-1337
oleate biosynthesis II (animals and fungi)
-
-
PWY-5996
One carbon pool by folate
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-
ornithine metabolism
-
-
Other glycan degradation
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-
oxalate degradation II
-
-
PWY-6695
oxalate degradation III
-
-
PWY-6696
oxalate degradation VI
-
-
PWY-7985
Oxidative phosphorylation
-
-
Pantothenate and CoA biosynthesis
-
-
pantothenate biosynthesis
-
-
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
Pentose phosphate pathway
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-
peptido-conjugates in tissue regeneration biosynthesis
-
-
PWY-8355
phenol degradation
-
-
phenylalanine metabolism
-
-
phenylethanol biosynthesis
-
-
PWY-5751
phosphatidylcholine acyl editing
-
-
PWY-6803
phospholipases
-
-
LIPASYN-PWY
phospholipid remodeling (phosphatidate, yeast)
-
-
PWY-7417
phospholipid remodeling (phosphatidylcholine, yeast)
-
-
PWY-7416
phospholipid remodeling (phosphatidylethanolamine, yeast)
-
-
PWY-7409
phosphopantothenate biosynthesis I
-
-
PANTO-PWY
photorespiration I
-
-
PWY-181
photorespiration II
-
-
PWY-8362
photorespiration III
-
-
PWY-8363
photosynthesis
-
-
photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
-
-
PWY-7218
phytol degradation
-
-
PWY66-389
plasmalogen degradation
-
-
PWY-7783
platensimycin biosynthesis
-
-
PWY-8179
polyhydroxybutanoate biosynthesis
-
-
PWY1-3
polyhydroxydecanoate biosynthesis
-
-
PWY-6657
Porphyrin and chlorophyll metabolism
-
-
ppGpp biosynthesis
-
-
ppGpp metabolism
-
-
PPGPPMET-PWY
propanoate fermentation to 2-methylbutanoate
-
-
PWY-5109
Propanoate metabolism
-
-
propanol degradation
-
-
propanoyl CoA degradation I
-
-
PROPIONMET-PWY
propionate fermentation
-
-
protectin biosynthesis
-
-
PWY-8357
purine deoxyribonucleosides degradation I
-
-
PWY-7179
purine deoxyribonucleosides degradation II
-
-
PWY-7179-1
Purine metabolism
-
-
purine metabolism
-
-
purine nucleobases degradation I (anaerobic)
-
-
P164-PWY
purine nucleobases degradation II (anaerobic)
-
-
PWY-5497
purine ribonucleosides degradation
-
-
PWY0-1296
Pyrimidine metabolism
-
-
pyrroloquinoline quinone biosynthesis
-
-
PWY-6420
pyruvate fermentation to (R)-lactate
-
-
PWY-8274
pyruvate fermentation to acetate II
-
-
PWY-5482
pyruvate fermentation to acetate IV
-
-
PWY-5485
pyruvate fermentation to acetone
-
-
PWY-6588
pyruvate fermentation to butanoate
-
-
CENTFERM-PWY
pyruvate fermentation to butanol I
-
-
PWY-6583
pyruvate fermentation to butanol II (engineered)
-
-
PWY-6883
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
-
PWY-5486
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to hexanol (engineered)
-
-
PWY-6863
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
pyruvate fermentation to propanoate I
-
-
P108-PWY
Pyruvate metabolism
-
-
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive acetyl coenzyme A pathway
-
-
reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
-
-
CODH-PWY
reductive acetyl coenzyme A pathway II (autotrophic methanogens)
-
-
PWY-7784
reductive glycine pathway of autotrophic CO2 fixation
-
-
PWY-8303
reductive monocarboxylic acid cycle
-
-
PWY-5493
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
resolvin D biosynthesis
-
-
PWY66-397
retinol biosynthesis
-
-
PWY-6857
Retinol metabolism
-
-
Rubisco shunt
-
-
PWY-5723
S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation II
-
-
PWY-7174
S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation III
-
-
PWY-8132
salidroside biosynthesis
-
-
PWY-6802
salinosporamide A biosynthesis
-
-
PWY-6627
Selenocompound metabolism
-
-
serine metabolism
-
-
serotonin degradation
-
-
PWY-6313
serotonin metabolism
-
-
Sesquiterpenoid and triterpenoid biosynthesis
-
-
sitosterol degradation to androstenedione
-
-
PWY-6948
Sphingolipid metabolism
-
-
sporopollenin precursors biosynthesis
-
-
PWY-6733
Starch and sucrose metabolism
-
-
stearate biosynthesis I (animals)
-
-
PWY-5972
stearate biosynthesis III (fungi)
-
-
PWY3O-355
Styrene degradation
-
-
suberin monomers biosynthesis
-
-
PWY-1121
sulfopterin metabolism
-
-
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
superpathway of methylsalicylate metabolism
-
-
PWY18C3-25
superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
-
-
PWY-7328
Taurine and hypotaurine metabolism
-
-
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VI (Helicobacter)
-
-
REDCITCYC
TCA cycle VII (acetate-producers)
-
-
PWY-7254
TCA cycle VIII (Chlamydia)
-
-
TCA-1
tetrahydrofolate biosynthesis I
-
-
PWY-6614
tetrahydrofolate metabolism
-
-
tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
-
-
PWY-6613
tetrahydromethanopterin biosynthesis
-
-
PWY-6148
Thiamine metabolism
-
-
thiocyanate degradation II
-
-
PWY-743
threonine metabolism
-
-
Toluene degradation
-
-
toluene degradation II (aerobic) (via 4-methylcatechol)
-
-
TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
-
-
TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
-
-
TOLUENE-DEG-2-OH-PWY
Tryptophan metabolism
-
-
tryptophan metabolism
-
-
Tyrosine metabolism
-
-
tyrosine metabolism
-
-
Ubiquinone and other terpenoid-quinone biosynthesis
-
-
UDP-alpha-D-galactofuranose biosynthesis
-
-
PWY-7622
UDP-GlcNAc biosynthesis
-
-
UDP-N-acetyl-D-galactosamine biosynthesis III
-
-
PWY-8013
UDP-N-acetyl-D-glucosamine biosynthesis I
-
-
UDPNAGSYN-PWY
UDP-N-acetyl-D-glucosamine biosynthesis II
-
-
UDPNACETYLGALSYN-PWY
urea cycle
-
-
urea degradation II
-
-
PWY-5704
valine metabolism
-
-
Valine, leucine and isoleucine biosynthesis
-
-
Valine, leucine and isoleucine degradation
-
-
valproate beta-oxidation
-
-
PWY-8182
vancomycin resistance I
-
-
PWY-6454
vitamin B12 metabolism
-
-
vitamin K-epoxide cycle
xanthine and xanthosine salvage
-
-
SALVPURINE2-PWY
Xylene degradation
-
-
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
top print hide
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
top print hide
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
wild-type Methylobacterium extorquens cells grown at steady state on a limiting concentration of succinate, are then switched to ethylamine as growth substrate, a condition where the cell must make a sudden switch from utilizing the tricarboxylic acid cycle to using the ethylmalonyl-CoA pathway for assimilation
Manually annotated by BRENDA team
-
oxalate enrichment culture
Manually annotated by BRENDA team
-
soil samples are collected below the Ca-oxalate producing trees Milicia excelsa and Afzelia africana and in a similar soil distant from trees
Manually annotated by BRENDA team
additional information
top print hide
LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
C5B120, P16027 and P14775, P16027 AND P14775 AND P14774
-
-
Manually annotated by BRENDA team
top
LINKS TO OTHER DATABASES (specific for Methylorubrum extorquens)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA