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Information on Organism Methanocaldococcus jannaschii DSM 2661

Methanocaldococcus jannaschii DSM 2661; Methanocaldococcus jannaschii str. DSM 2661; Methanococcus jannaschii DSM 2661;

TaxTree of Organism Methanocaldococcus jannaschii DSM 2661

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cellular organisms

can be found in Brenda

BRENDA pathways

(superkingdom)

Euryarchaeota can be found in Brenda

can be found in Brenda

BRENDA pathways

(phylum)

Methanomada group can be found in Brenda

can be found in Brenda

(clade)

Methanococci can be found in Brenda

can be found in Brenda

BRENDA pathways

(class)

Methanococcales can be found in Brenda

can be found in Brenda

BRENDA pathways

(order)

Methanocaldococcaceae can be found in Brenda

can be found in Brenda

(family)

Methanocaldococcus can be found in Brenda

can be found in Brenda

BRENDA pathways

(genus)

Methanocaldococcus jannaschii can be found in Brenda

can be found in Brenda

BRENDA pathways

(species)

Methanocaldococcus jannaschii DSM 2661

can be found in Brenda

BRENDA pathways

(strain)

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preliminary BRENDA-supplied EC number

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preliminary BRENDA-supplied EC number

preliminary BRENDA-supplied EC number

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preliminary BRENDA-supplied EC number

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preliminary BRENDA-supplied EC number

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1-butanol autotrophic biosynthesis (engineered)

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PWY-6886

2'-deoxymugineic acid phytosiderophore biosynthesis

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PWY-5912

3-dehydroquinate biosynthesis II (archaea)

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PWY-6160

3-methylbutanol biosynthesis (engineered)

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PWY-6871

3PG-factor 420 biosynthesis

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PWY-8113

5-aminoimidazole ribonucleotide biosynthesis I

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PWY-6121

5-aminoimidazole ribonucleotide biosynthesis II

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PWY-6122

7-(3-amino-3-carboxypropyl)-wyosine biosynthesis

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PWY-7286

adenine and adenosine salvage III

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PWY-6609

adenine and adenosine salvage V

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PWY-6611

adenine salvage

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PWY-6610

adenosine deoxyribonucleotides de novo biosynthesis I

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PWY-7227

adenosine deoxyribonucleotides de novo biosynthesis II

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PWY-7220

adenosine nucleotides degradation II

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SALVADEHYPOX-PWY

adenosine ribonucleotides de novo biosynthesis

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PWY-7219

adenosylcobinamide-GDP biosynthesis from cobyrinate a,c-diamide

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PWY-7962

adenosylcobinamide-GDP salvage from assorted adenosylcobamides

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PWY-8282

adenosylcobinamide-GDP salvage from cobinamide I

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PWY-7971

adenosylcobinamide-GDP salvage from cobinamide II

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PWY-7972

alanine metabolism

alanine metabolism

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Alanine, aspartate and glutamate metabolism

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Amino sugar and nucleotide sugar metabolism

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Aminoacyl-tRNA biosynthesis

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archaeosine biosynthesis I

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PWY-6711

Arginine and proline metabolism

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beta-alanine biosynthesis III

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PWY-5155

beta-Alanine metabolism

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Bifidobacterium shunt

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P124-PWY

Biosynthesis of secondary metabolites

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C20,20 CDP-archaeol biosynthesis

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PWY-6349

C25,25 CDP-archaeol biosynthesis

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PWY-8365

C5-Branched dibasic acid metabolism

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Calvin-Benson-Bassham cycle

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CALVIN-PWY

Carbon fixation in photosynthetic organisms

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chitin degradation I (archaea)

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PWY-6855

chorismate metabolism

chorismate metabolism

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CMP phosphorylation

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PWY-7205

coenzyme A biosynthesis I (bacteria)

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COA-PWY

coenzyme A biosynthesis II (eukaryotic)

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PWY-7851

coenzyme A biosynthesis III (archaea)

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PWY-8342

coenzyme A metabolism

coenzyme A metabolism

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coenzyme B/coenzyme M regeneration II (ferredoxin-dependent)

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PWY-7865

coenzyme M biosynthesis

coenzyme M biosynthesis

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Cyanoamino acid metabolism

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Cysteine and methionine metabolism

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D-arabinose degradation II

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DARABCATK12-PWY

D-myo-inositol (1,4,5)-trisphosphate degradation

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PWY-6363

degradation of hexoses

degradation of hexoses

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degradation of pentoses

degradation of pentoses

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Drug metabolism - other enzymes

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dTMP de novo biosynthesis (mitochondrial)

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PWY66-385

dZTP biosynthesis

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PWY-8289

Entner Doudoroff pathway

Entner Doudoroff pathway

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Entner-Doudoroff pathway III (semi-phosphorylative)

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PWY-2221

Escherichia coli serotype O:1B/Salmonella enterica serotype O:42 O antigen biosynthesis

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PWY-8237

Escherichia coli serotype O:85/Salmonella enterica serotype O:17 O antigen biosynthesis

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PWY-8207

ethene biosynthesis I (plants)

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ETHYL-PWY

ethene biosynthesis V (engineered)

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PWY-7124

factor 420 biosynthesis

factor 420 biosynthesis

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factor 420 biosynthesis I (archaea)

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PWY-8112

factor 420 biosynthesis II (mycobacteria)

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PWY-5198

flavin biosynthesis

flavin biosynthesis

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flavin biosynthesis I (bacteria and plants)

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RIBOSYN2-PWY

flavin biosynthesis II (archaea)

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PWY-6167

flavin biosynthesis III (fungi)

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PWY-6168

Folate biosynthesis

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folate polyglutamylation

folate transformations I

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PWY-2201

folate transformations II (plants)

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PWY-3841

folate transformations III (E. coli)

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1CMET2-PWY

formaldehyde assimilation I (serine pathway)

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PWY-1622

Fructose and mannose metabolism

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gluconeogenesis I

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GLUCONEO-PWY

gluconeogenesis II (Methanobacterium thermoautotrophicum)

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PWY-6142

glycerol degradation to butanol

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PWY-7003

Glycerophospholipid metabolism

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glycine betaine degradation I

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PWY-3661

glycine betaine degradation II (mammalian)

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PWY-3661-1

glycine betaine degradation III

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PWY-8325

glycine biosynthesis I

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GLYSYN-PWY

glycine metabolism

glycine metabolism

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Glycine, serine and threonine metabolism

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glycolysis

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Glycolysis / Gluconeogenesis

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glycolysis I (from glucose 6-phosphate)

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GLYCOLYSIS

glycolysis II (from fructose 6-phosphate)

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PWY-5484

glycolysis III (from glucose)

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ANAGLYCOLYSIS-PWY

glycolysis IV

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PWY-1042

glycolysis V (Pyrococcus)

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P341-PWY

Glycosaminoglycan biosynthesis - heparan sulfate / heparin

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Glyoxylate and dicarboxylate metabolism

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guanosine deoxyribonucleotides de novo biosynthesis I

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PWY-7226

guanosine deoxyribonucleotides de novo biosynthesis II

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PWY-7222

guanosine ribonucleotides de novo biosynthesis

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PWY-7221

heparan sulfate biosynthesis

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PWY-6558

histidine metabolism

histidine metabolism

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hydrogen sulfide biosynthesis II (mammalian)

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PWY66-426

inosine-5'-phosphate biosynthesis I

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PWY-6123

inosine-5'-phosphate biosynthesis II

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PWY-6124

inosine-5'-phosphate biosynthesis III

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PWY-7234

Inositol phosphate metabolism

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isoleucine metabolism

isoleucine metabolism

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isoprene biosynthesis II (engineered)

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PWY-7391

L-arginine degradation III (arginine decarboxylase/agmatinase pathway)

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PWY0-823

L-cysteine biosynthesis II (tRNA-dependent)

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PWY-6308

L-fucose degradation I

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FUCCAT-PWY

L-isoleucine biosynthesis II

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PWY-5101

L-leucine biosynthesis

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LEUSYN-PWY

L-methionine degradation I (to L-homocysteine)

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METHIONINE-DEG1-PWY

L-selenocysteine biosynthesis II (archaea and eukaryotes)

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PWY-6281

L-serine biosynthesis I

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SERSYN-PWY

lactate biosynthesis (archaea)

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PWY-5197

leucine metabolism

leucine metabolism

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lipid metabolism

lipid metabolism

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Lysine biosynthesis

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lysine metabolism

lysine metabolism

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Metabolic pathways

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metabolism of amino sugars and derivatives

metabolism of amino sugars and derivatives

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Methane metabolism

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methanofuran biosynthesis

methanogenesis from CO2

methanogenesis from CO2

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methionine metabolism

methionine metabolism

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methylwyosine biosynthesis

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PWY-7285

mevalonate metabolism

mevalonate metabolism

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mevalonate pathway I (eukaryotes and bacteria)

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PWY-922

mevalonate pathway II (haloarchaea)

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PWY-6174

mevalonate pathway III (Thermoplasma)

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PWY-7524

mevalonate pathway IV (archaea)

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PWY-8125

Microbial metabolism in diverse environments

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myo-inositol biosynthesis

N1-methyl-N3-aminocarboxypropyl-pseudouridine-modified rRNA biosynthesis

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PWY-8341

NAD biosynthesis from nicotinamide

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NAD-BIOSYNTHESIS-III

NAD de novo biosynthesis I

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PYRIDNUCSYN-PWY

NAD de novo biosynthesis III

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PWY-8352

NAD de novo biosynthesis IV (anaerobic)

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PWY-8277

NAD metabolism

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NAD salvage pathway I (PNC VI cycle)

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PYRIDNUCSAL-PWY

NAD salvage pathway II (PNC IV cycle)

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PWY-7761

NAD salvage pathway IV (from nicotinamide riboside)

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PWY3O-4106

Nicotinate and nicotinamide metabolism

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non-pathway related

non-pathway related

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nucleoside and nucleotide degradation (archaea)

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PWY-5532

O-Antigen nucleotide sugar biosynthesis

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One carbon pool by folate

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Pantothenate and CoA biosynthesis

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Pentose and glucuronate interconversions

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Pentose phosphate pathway

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Phenylalanine, tyrosine and tryptophan biosynthesis

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photorespiration I

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PWY-181

photorespiration II

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PWY-8362

photorespiration III

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PWY-8363

photosynthesis

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photosynthetic 3-hydroxybutanoate biosynthesis (engineered)

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PWY-7218

phytate degradation I

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PWY-4702

poly(3-O-beta-D-glucopyranosyl-N-acetylgalactosamine 1-phosphate) wall teichoic acid biosynthesis

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PWY-7819

poly(glycerol phosphate) wall teichoic acid biosynthesis

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TEICHOICACID-PWY

poly(ribitol phosphate) wall teichoic acid biosynthesis I (B. subtilis)

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PWY-7815

poly(ribitol phosphate) wall teichoic acid biosynthesis II (S. aureus)

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PWY-7816

polyamine pathway

polyamine pathway

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Porphyrin and chlorophyll metabolism

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ppGpp metabolism

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PPGPPMET-PWY

proline metabolism

proline metabolism

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PRPP biosynthesis

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PWY0-662

purine deoxyribonucleosides degradation I

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PWY-7179

purine deoxyribonucleosides degradation II

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PWY-7179-1

purine deoxyribonucleosides salvage

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PWY-7224

Purine metabolism

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purine metabolism

purine metabolism

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purine nucleobases degradation II (anaerobic)

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PWY-5497

purine ribonucleosides degradation

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PWY0-1296

putrescine biosynthesis I

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PWY-40

pyrimidine deoxyribonucleotide phosphorylation

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PWY-7197

pyrimidine deoxyribonucleotides biosynthesis from CTP

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PWY-7210

pyrimidine deoxyribonucleotides de novo biosynthesis I

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PWY-7184

pyrimidine deoxyribonucleotides de novo biosynthesis II

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PWY-7187

pyrimidine deoxyribonucleotides de novo biosynthesis III

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PWY-6545

pyrimidine deoxyribonucleotides de novo biosynthesis IV

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PWY-7198

Pyrimidine metabolism

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pyrimidine metabolism

pyrimidine metabolism

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Pyruvate metabolism

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Riboflavin metabolism

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Rubisco shunt

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PWY-5723

S-adenosyl-L-methionine biosynthesis

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SAM-PWY

S-adenosyl-L-methionine salvage I

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PWY-6151

S-adenosyl-L-methionine salvage II

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PWY-5041

S-methyl-5'-thioadenosine degradation III

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PWY-6753

Salmonella enterica serotype O:54 O antigen biosynthesis

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PWY-8204

Selenocompound metabolism

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selenocysteine biosynthesis

selenocysteine biosynthesis

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serine metabolism

serine metabolism

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Streptomycin biosynthesis

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superpathway of 5-aminoimidazole ribonucleotide biosynthesis

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PWY-6277

superpathway of adenosylcobalamin salvage from cobinamide I

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COBALSYN-PWY

superpathway of adenosylcobalamin salvage from cobinamide II

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PWY-6269

superpathway of glucose and xylose degradation

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PWY-6901

superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)

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PWY0-166

Terpenoid backbone biosynthesis

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tetrahydromethanopterin biosynthesis

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PWY-6148

Thiamine metabolism

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thiazole component of thiamine diphosphate biosynthesis III

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PWY-6909

thiazole component of thiamine diphosphate biosynthesis IV

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PWY-8308

tRNA charging

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TRNA-CHARGING-PWY

tRNA methylation (yeast)

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PWY-6829

tRNA splicing I

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PWY-6689

tRNA splicing II

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PWY-7803

tyrosine metabolism

tyrosine metabolism

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UDP-N-acetyl-alpha-D-mannosaminouronate biosynthesis

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PWY-7335

UMP biosynthesis I

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PWY-5686

UMP biosynthesis II

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PWY-7790

UMP biosynthesis III

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PWY-7791

UTP and CTP de novo biosynthesis

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PWY-7176

Valine, leucine and isoleucine biosynthesis

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vitamin B1 metabolism

vitamin B1 metabolism

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vitamin B12 metabolism

vitamin B12 metabolism

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Methanocaldococcus jannaschii DSM 2661

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Methanocaldococcus jannaschii DSM 2661

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Manually annotated by BRENDA team

Methanocaldococcus jannaschii DSM 2661

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Manually annotated by BRENDA team

Methanocaldococcus jannaschii DSM 2661

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Manually annotated by BRENDA team

Methanocaldococcus jannaschii DSM 2661

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Manually annotated by BRENDA team

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NCBI: Taxonomy, PubMed, Genome

SILVA: 16S/18S rRNA, 23S/28S rRNA

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Release 2023.1 (January 2023)