Information on Organism Geobacter metallireducens

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(S)-lactate fermentation to propanoate, acetate and hydrogen

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PWY-8086

(S)-propane-1,2-diol degradation

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PWY-7013

3-hydroxypropanoate cycle

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PWY-5743

3-hydroxypropanoate/4-hydroxybutanate cycle

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PWY-5789

3-methylbutanol biosynthesis (engineered)

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PWY-6871

4-aminobutanoate degradation V

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PWY-5022

4-coumarate degradation (anaerobic)

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PWY-7046

ABH and Lewis epitopes biosynthesis from type 1 precursor disaccharide

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PWY-7832

ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide

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PWY-7831

acetaldehyde biosynthesis I

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PWY-6333

acetate fermentation

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acetylene degradation (anaerobic)

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P161-PWY

aerobic respiration I (cytochrome c)

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PWY-3781

aerobic respiration II (cytochrome c) (yeast)

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PWY-7279

aerobic respiration III (alternative oxidase pathway)

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PWY-4302

aerobic toluene degradation

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alanine metabolism

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Alanine, aspartate and glutamate metabolism

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00250

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alpha-Linolenic acid metabolism

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00592

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Aminobenzoate degradation

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00627

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anaerobic aromatic compound degradation (Thauera aromatica)

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BENZCOA-PWY

anaerobic energy metabolism (invertebrates, mitochondrial)

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PWY-7384

anapleurotic synthesis of oxalacetate

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Arginine biosynthesis

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00220

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benzoate biosynthesis I (CoA-dependent, beta-oxidative)

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PWY-6443

Benzoate degradation

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00362

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benzoate degradation II (aerobic and anaerobic)

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PWY-283

benzoate fermentation (to acetate and cyclohexane carboxylate)

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PWY-7402

benzoyl-CoA degradation

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benzoyl-CoA degradation II (anaerobic)

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CENTBENZCOA-PWY

benzoyl-CoA degradation III (anaerobic)

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P321-PWY

beta-Alanine metabolism

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00410

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Biosynthesis of secondary metabolites

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01110

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Butanoate metabolism

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00650

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butanol and isobutanol biosynthesis (engineered)

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PWY-7396

C4 photosynthetic carbon assimilation cycle, NAD-ME type

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PWY-7115

Carbon fixation pathways in prokaryotes

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00720

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chitin deacetylation

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PWY-7118

Chloroalkane and chloroalkene degradation

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00625

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Citrate cycle (TCA cycle)

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00020

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citrate lyase activation

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P2-PWY

citric acid cycle

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CO2 fixation in Crenarchaeota

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coenzyme B/coenzyme M regeneration I (methanophenazine-dependent)

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PWY-5207

coenzyme M biosynthesis

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conversion of succinate to propanoate

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PWY0-43

crotonate fermentation (to acetate and cyclohexane carboxylate)

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PWY-7401

crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered)

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PWY-7854

cyclohexane-1-carboxylate degradation (anaerobic)

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PWY-301

D-galactarate degradation I

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GALACTARDEG-PWY

D-glucarate degradation I

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GLUCARDEG-PWY

D-lactate to cytochrome bo oxidase electron transfer

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PWY0-1565

degradation of sugar acids

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denitrification

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Drug metabolism - cytochrome P450

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00982

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Drug metabolism - other enzymes

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00983

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ethanol degradation I

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ETOH-ACETYLCOA-ANA-PWY

ethanol degradation II

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PWY66-21

ethanol fermentation

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ethanolamine utilization

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PWY0-1477

ethene biosynthesis IV (engineered)

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PWY-7126

ethene biosynthesis V (engineered)

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PWY-7124

ethylmalonyl-CoA pathway

Fatty acid degradation

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00071

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Fe(II) oxidation

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PWY-6692

formate oxidation to CO2

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PWY-1881

gluconeogenesis

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gluconeogenesis I

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GLUCONEO-PWY

gluconeogenesis II (Methanobacterium thermoautotrophicum)

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PWY-6142

gluconeogenesis III

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PWY66-399

glutamate and glutamine metabolism

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glycerol-3-phosphate to cytochrome bo oxidase electron transfer

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PWY0-1561

glycerol-3-phosphate to fumarate electron transfer

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PWY0-1582

Glycine, serine and threonine metabolism

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00260

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glycolate and glyoxylate degradation I

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GLYCOLATEMET-PWY

Glycolysis / Gluconeogenesis

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00010

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Glycosphingolipid biosynthesis - lacto and neolacto series

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00601

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Glyoxylate and dicarboxylate metabolism

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00630

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glyoxylate cycle

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GLYOXYLATE-BYPASS

gossypol biosynthesis

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PWY-5773

heterolactic fermentation

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P122-PWY

hydrogen oxidation I (aerobic)

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P283-PWY

hydrogen production

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hydrogen to fumarate electron transfer

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PWY0-1576

incomplete reductive TCA cycle

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P42-PWY

isoprenoid biosynthesis

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itaconate degradation

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PWY-5749

justicidin B biosynthesis

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PWY-6824

ketolysis

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PWY66-368

L-alanine degradation II (to D-lactate)

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ALACAT2-PWY

L-carnitine degradation II

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PWY-3641

L-glutamate degradation I

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GLUTAMATE-DEG1-PWY

L-glutamate degradation V (via hydroxyglutarate)

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P162-PWY

L-glutamate degradation XI (reductive Stickland reaction)

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PWY-8190

L-isoleucine degradation II

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PWY-5078

L-leucine degradation III

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PWY-5076

L-malate degradation II

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PWY-7686

L-methionine degradation III

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PWY-5082

L-phenylalanine degradation III

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PWY-5079

L-tryptophan degradation V (side chain pathway)

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PWY-3162

L-tyrosine degradation III

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PWY3O-4108

L-valine degradation II

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PWY-5057

leucine metabolism

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lipid metabolism

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Lysine degradation

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00310

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manganese oxidation I

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PWY-6591

matairesinol biosynthesis

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PWY-5466

Metabolic pathways

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01100

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Metabolism of xenobiotics by cytochrome P450

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00980

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Methane metabolism

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00680

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Methanobacterium thermoautotrophicum biosynthetic metabolism

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PWY-6146

methanogenesis from CO2

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methionine metabolism

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methyl indole-3-acetate interconversion

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PWY-6303

methylaspartate cycle

methylerythritol phosphate pathway I

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NONMEVIPP-PWY

methylerythritol phosphate pathway II

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PWY-7560

methylsalicylate degradation

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PWY18C3-24

Microbial metabolism in diverse environments

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01120

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mixed acid fermentation

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FERMENTATION-PWY

NAD(P)/NADPH interconversion

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PWY-5083

NADH to cytochrome bd oxidase electron transfer I

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PWY0-1334

NADH to cytochrome bo oxidase electron transfer I

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PWY0-1335

NADH to cytochrome bo oxidase electron transfer II

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PWY0-1567

NADH to fumarate electron transfer

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PWY0-1336

NADPH to cytochrome c oxidase via plastocyanin

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PWY-8271

Naphthalene degradation

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00626

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nitrate assimilation

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nitrate reduction I (denitrification)

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DENITRIFICATION-PWY

nitrate reduction II (assimilatory)

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PWY-381

nitrate reduction IV (dissimilatory)

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PWY-5674

nitrate reduction X (dissimilatory, periplasmic)

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PWY0-1584

nitrifier denitrification

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PWY-7084

nitrogen fixation I (ferredoxin)

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N2FIX-PWY

Nitrogen metabolism

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00910

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nitrogen remobilization from senescing leaves

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PWY-6549

Nitrotoluene degradation

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00633

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non-pathway related

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noradrenaline and adrenaline degradation

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PWY-6342

oleandomycin activation/inactivation

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PWY-6972

oxalate degradation III

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PWY-6696

oxalate degradation VI

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PWY-7985

oxidative decarboxylation of pyruvate

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Oxidative phosphorylation

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00190

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oxidative phosphorylation

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Pantothenate and CoA biosynthesis

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00770

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pantothenate biosynthesis

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partial TCA cycle (obligate autotrophs)

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PWY-5913

phenol degradation

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phenol degradation II (anaerobic)

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PHENOLDEG-PWY

phenylalanine metabolism

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phenylethanol biosynthesis

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PWY-5751

phosphopantothenate biosynthesis I

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PANTO-PWY

Photosynthesis

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00195

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photosynthesis light reactions

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PWY-101

phytol degradation

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PWY66-389

plastoquinol-9 biosynthesis II

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PWY-6978

proline to cytochrome bo oxidase electron transfer

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PWY0-1544

Propanoate metabolism

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00640

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propanol degradation

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propanoyl CoA degradation I

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PROPIONMET-PWY

propionate fermentation

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purine nucleobases degradation I (anaerobic)

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P164-PWY

purine nucleobases degradation II (anaerobic)

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PWY-5497

pyruvate decarboxylation to acetyl CoA II

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PWY-6970

pyruvate fermentation to ethanol I

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PWY-5480

pyruvate fermentation to ethanol II

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PWY-5486

pyruvate fermentation to ethanol III

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PWY-6587

pyruvate fermentation to isobutanol (engineered)

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PWY-7111

pyruvate fermentation to propanoate I

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P108-PWY

Pyruvate metabolism

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00620

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pyruvate to cytochrome bo oxidase electron transfer

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PWY-7544

reductive acetyl coenzyme A pathway

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reductive TCA cycle I

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P23-PWY

reductive TCA cycle II

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PWY-5392

retinol biosynthesis

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PWY-6857

Retinol metabolism

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00830

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salicortin biosynthesis

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PWY-6763

salidroside biosynthesis

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PWY-6802

serotonin degradation

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PWY-6313

serotonin metabolism

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sesamin biosynthesis

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PWY-5469

succinate to chytochrome c oxidase via cytochrome c6

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PWY1YI0-2

succinate to cytochrome bd oxidase electron transfer

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PWY0-1353

succinate to cytochrome bo oxidase electron transfer

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PWY0-1329

succinate to cytochrome c oxidase via plastocyanin

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PWY1YI0-3

succinate to plastoquinol oxidase

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PWY1YI0-8

Sulfur metabolism

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00920

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superpathway of fermentation (Chlamydomonas reinhardtii)

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PWY4LZ-257

superpathway of glyoxylate cycle and fatty acid degradation

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PWY-561

superpathway of methylsalicylate metabolism

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PWY18C3-25

Taurine and hypotaurine metabolism

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00430

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TCA cycle I (prokaryotic)

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TCA

TCA cycle II (plants and fungi)

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PWY-5690

TCA cycle III (animals)

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PWY66-398

TCA cycle IV (2-oxoglutarate decarboxylase)

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P105-PWY

TCA cycle V (2-oxoglutarate synthase)

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PWY-6969

TCA cycle VI (Helicobacter)

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REDCITCYC

TCA cycle VII (acetate-producers)

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PWY-7254

TCA cycle VIII (Chlamydia)

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TCA-1

Terpenoid backbone biosynthesis

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00900

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tetrahydroxyxanthone biosynthesis (from benzoate)

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PWY-5001

Toluene degradation

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00623

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toluene degradation

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toluene degradation to benzoyl-CoA (anaerobic)

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PWY-81

Tryptophan metabolism

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00380

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tryptophan metabolism

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Tyrosine metabolism

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00350

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tyrosine metabolism

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ubiquinol-10 biosynthesis (early decarboxylation)

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PWY-5857

ubiquinol-7 biosynthesis (early decarboxylation)

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PWY-5855

ubiquinol-8 biosynthesis (early decarboxylation)

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PWY-6708

ubiquinol-9 biosynthesis (early decarboxylation)

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PWY-5856

Ubiquinone and other terpenoid-quinone biosynthesis

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00130

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ubiquinone biosynthesis

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valine metabolism

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Valine, leucine and isoleucine degradation

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00280

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vitamin K-epoxide cycle

Geobacter metallireducens

9 entries

culture condition:benzoate-grown cell

Geobacter metallireducens

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712280

cytoplasm

Geobacter metallireducens

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mitochondrial inner membrane

Geobacter metallireducens

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5743

712280

NCBI: Taxonomy, PubMed, Genome

SILVA: 16S/18S rRNA, 23S/28S rRNA

: 5791