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Information on Organism Escherichia coli MC1061

Escherichia coli MC1061;

TaxTree of Organism Escherichia coli MC1061

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cellular organisms

can be found in Brenda

BRENDA pathways

(superkingdom)

Proteobacteria can be found in Brenda

can be found in Brenda

BRENDA pathways

(phylum)

Gammaproteobacteria can be found in Brenda

can be found in Brenda

BRENDA pathways

(class)

Enterobacterales can be found in Brenda

can be found in Brenda

BRENDA pathways

(order)

Enterobacteriaceae can be found in Brenda

can be found in Brenda

BRENDA pathways

(family)

Escherichia can be found in Brenda

can be found in Brenda

BRENDA pathways

(genus)

Escherichia coli can be found in Brenda

can be found in Brenda

BRENDA pathways

(species)

Escherichia coli K-12 can be found in Brenda

can be found in Brenda

BRENDA pathways

(strain)

Escherichia coli MC1061

can be found in Brenda

BRENDA pathways

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4-aminobutanoate degradation II

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PWY-6537

4-hydroxyphenylacetate degradation

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3-HYDROXYPHENYLACETATE-DEGRADATION-PWY

alanine metabolism

alanine metabolism

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Alanine, aspartate and glutamate metabolism

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amygdalin and prunasin degradation

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PWY-6011

bacterial bioluminescence

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PWY-7723

bile acid biosynthesis, neutral pathway

bile acid biosynthesis, neutral pathway

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bile acids deconjugation

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PWY-8135

Biosynthesis of secondary metabolites

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bis(guanylyl molybdopterin) cofactor sulfurylation

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PWY-8164

Butanoate metabolism

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Cyanoamino acid metabolism

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Cysteine and methionine metabolism

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cytidylyl molybdenum cofactor sulfurylation

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PWY-8165

cytosolic NADPH production (yeast)

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PWY-7268

di-trans,poly-cis-undecaprenyl phosphate biosynthesis

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PWY-5785

Entner-Doudoroff pathway I

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PWY-8004

formaldehyde oxidation I

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RUMP-PWY

Galactose metabolism

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glutamate and glutamine metabolism

glutamate and glutamine metabolism

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Glutathione metabolism

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glycogen metabolism

glycogen metabolism

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Glycosaminoglycan degradation

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Glycosphingolipid biosynthesis - ganglio series

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heterolactic fermentation

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P122-PWY

L-alanine biosynthesis III

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PWY0-1021

lipid metabolism

lipid metabolism

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Metabolic pathways

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metabolism of disaccharids

metabolism of disaccharids

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Microbial metabolism in diverse environments

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molybdopterin biosynthesis

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PWY-6823

NADPH to cytochrome c oxidase via plastocyanin

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PWY-8271

Nicotinate and nicotinamide metabolism

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nicotine degradation I (pyridine pathway)

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P181-PWY

nicotine degradation II (pyrrolidine pathway)

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PWY-6993

nitrate reduction II (assimilatory)

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PWY-381

Nitrogen metabolism

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Other glycan degradation

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Penicillin and cephalosporin biosynthesis

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Pentose phosphate pathway

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pentose phosphate pathway

pentose phosphate pathway

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pentose phosphate pathway (oxidative branch) I

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OXIDATIVEPENT-PWY

Peptidoglycan biosynthesis

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peptidoglycan biosynthesis

peptidoglycan biosynthesis

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peptidoglycan biosynthesis II (staphylococci)

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PWY-5265

peptidoglycan biosynthesis IV (Enterococcus faecium)

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PWY-6471

peptidoglycan maturation (meso-diaminopimelate containing)

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PWY0-1586

phenylmercury acetate degradation

Photosynthesis

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photosynthesis light reactions

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PWY-101

Primary bile acid biosynthesis

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Secondary bile acid biosynthesis

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Sphingolipid metabolism

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Starch and sucrose metabolism

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starch degradation

starch degradation

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superpathway of glycolysis and the Entner-Doudoroff pathway

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GLYCOLYSIS-E-D

TCA cycle IV (2-oxoglutarate decarboxylase)

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P105-PWY

Terpenoid backbone biosynthesis

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Thiamine metabolism

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thiazole component of thiamine diphosphate biosynthesis I

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PWY-6892

tRNA-uridine 2-thiolation and selenation (bacteria)

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PWY-7892

vitamin B1 metabolism

vitamin B1 metabolism

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xyloglucan degradation II (exoglucanase)

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PWY-6807

[2Fe-2S] iron-sulfur cluster biosynthesis

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PWY-7250

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Escherichia coli MC1061

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Escherichia coli MC1061

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Manually annotated by BRENDA team

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NCBI: Taxonomy, PubMed, Genome

SILVA: 16S/18S rRNA, 23S/28S rRNA

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Release 2023.1 (January 2023)