Information on Organism Coptis chinensis

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EC NUMBER
COMMENTARY hide
deleted, the activty is included in EC 1.3.5.1, succinate dehydrogenase (quinone)
transferred to EC 1.14.19.68
deleted 2008. Now divided into EC 4.3.1.23 (tyrosine ammonia-lyase), EC 4.3.1.24 (phenylalanine ammonia-lyase) and EC 4.3.1.25 (phenylalanine/tyrosine ammonia-lyase)
PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
Biosynthesis of antibiotics
-
01130
-
Biosynthesis of secondary metabolites
-
01110
-
Caprolactam degradation
-
00930
-
detoxification of reactive carbonyls in chloroplasts
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-
PWY-6786
ethylene glycol biosynthesis (engineered)
-
-
PWY-7178
Glycerolipid metabolism
-
00561
-
Glycolysis / Gluconeogenesis
-
00010
-
L-tryptophan degradation X (mammalian, via tryptamine)
-
-
PWY-6307
Metabolic pathways
-
01100
-
Microbial metabolism in diverse environments
-
01120
-
Pentose and glucuronate interconversions
-
00040
-
pyruvate fermentation to butanol I
-
-
PWY-6583
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
-
-
PWY-5410
lipid A biosynthesis
lipid A biosynthesis
-
-
Bifidobacterium shunt
-
-
P124-PWY
Cysteine and methionine metabolism
-
00270
-
heterolactic fermentation
-
-
P122-PWY
Propanoate metabolism
-
00640
-
pyruvate fermentation to (S)-lactate
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-
PWY-5481
Pyruvate metabolism
-
00620
-
superpathway of glucose and xylose degradation
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-
PWY-6901
L-lactaldehyde degradation
L-lactaldehyde degradation
-
-
lactate fermentation
lactate fermentation
-
-
L-alanine degradation II (to D-lactate)
-
-
ALACAT2-PWY
mixed acid fermentation
-
-
FERMENTATION-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
vancomycin resistance I
-
-
PWY-6454
alanine metabolism
alanine metabolism
-
-
Entner-Doudoroff pathway I
-
-
PWY-8004
formaldehyde oxidation I
-
-
RUMP-PWY
Glutathione metabolism
-
00480
-
NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
-
-
PWY-7268
Pentose phosphate pathway
-
00030
-
pentose phosphate pathway (oxidative branch) I
-
-
OXIDATIVEPENT-PWY
superpathway of glycolysis and the Entner-Doudoroff pathway
-
-
GLYCOLYSIS-E-D
pentose phosphate pathway
pentose phosphate pathway
-
-
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
-
-
PWY-7279
aerobic respiration III (alternative oxidase pathway)
-
-
PWY-4302
Butanoate metabolism
-
00650
-
Carbon fixation pathways in prokaryotes
-
00720
-
Citrate cycle (TCA cycle)
-
00020
-
methylaspartate cycle
-
-
PWY-6728
Oxidative phosphorylation
-
00190
-
succinate to cytochrome bd oxidase electron transfer
-
-
PWY0-1353
succinate to cytochrome bo oxidase electron transfer
-
-
PWY0-1329
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
TCA cycle I (prokaryotic)
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-
TCA
TCA cycle II (plants and fungi)
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-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
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-
PWY-6969
TCA cycle VII (acetate-producers)
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-
PWY-7254
citric acid cycle
citric acid cycle
-
-
propionate fermentation
propionate fermentation
-
-
Arginine and proline metabolism
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00330
-
aromatic biogenic amine degradation (bacteria)
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-
PWY-7431
dopamine degradation
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-
PWY6666-2
Drug metabolism - cytochrome P450
-
00982
-
Glycine, serine and threonine metabolism
-
00260
-
Histidine metabolism
-
00340
-
Isoquinoline alkaloid biosynthesis
-
00950
-
L-phenylalanine degradation IV (mammalian, via side chain)
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-
PWY-6318
L-tryptophan degradation VI (via tryptamine)
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-
PWY-3181
melatonin degradation II
-
-
PWY-6399
noradrenaline and adrenaline degradation
-
-
PWY-6342
Phenylalanine metabolism
-
00360
-
putrescine degradation III
-
-
PWY-0
salidroside biosynthesis
-
-
PWY-6802
serotonin degradation
-
-
PWY-6313
Tryptophan metabolism
-
00380
-
Tyrosine metabolism
-
00350
-
tryptophan metabolism
tryptophan metabolism
-
-
beta-Alanine metabolism
-
00410
-
L-threonine degradation III (to methylglyoxal)
-
-
THRDLCTCAT-PWY
phenylethanol biosynthesis
-
-
PWY-5751
phenylethylamine degradation I
-
-
2PHENDEG-PWY
Tropane, piperidine and pyridine alkaloid biosynthesis
-
00960
-
threonine metabolism
threonine metabolism
-
-
nitrate reduction II (assimilatory)
-
-
PWY-381
Nitrogen metabolism
-
00910
-
ammonia oxidation II (anaerobic)
-
-
P303-PWY
nitrate reduction I (denitrification)
-
-
DENITRIFICATION-PWY
nitrate reduction VII (denitrification)
-
-
PWY-6748
nitrifier denitrification
-
-
PWY-7084
nitrite-dependent anaerobic methane oxidation
-
-
PWY-6523
denitrification
denitrification
-
-
Terpenoid backbone biosynthesis
-
00900
-
o-diquinones biosynthesis
-
-
PWY-6752
ethanol degradation IV
-
-
PWY66-162
Glyoxylate and dicarboxylate metabolism
-
00630
-
methanol oxidation to formaldehyde IV
-
-
PWY-5506
reactive oxygen species degradation
-
-
DETOX1-PWY-1
superoxide radicals degradation
-
-
DETOX1-PWY
non-pathway related
non-pathway related
-
-
Arachidonic acid metabolism
-
00590
-
glutathione-peroxide redox reactions
-
-
PWY-4081
arachidonic acid metabolism
arachidonic acid metabolism
-
-
glutathione metabolism
glutathione metabolism
-
-
Drug metabolism - other enzymes
-
00983
-
Arginine biosynthesis
-
00220
-
nitric oxide biosynthesis II (mammals)
-
-
PWY-4983
1,5-anhydrofructose degradation
-
-
PWY-6992
acetone degradation I (to methylglyoxal)
-
-
PWY-5451
acetone degradation III (to propane-1,2-diol)
-
-
PWY-7466
Amaryllidacea alkaloids biosynthesis
-
-
PWY-7826
Aminobenzoate degradation
-
00627
-
bupropion degradation
-
-
PWY66-241
Caffeine metabolism
-
00232
-
Fatty acid degradation
-
00071
-
Linoleic acid metabolism
-
00591
-
melatonin degradation I
-
-
PWY-6398
Metabolism of xenobiotics by cytochrome P450
-
00980
-
nicotine degradation IV
-
-
PWY66-201
nicotine degradation V
-
-
PWY66-221
Retinol metabolism
-
00830
-
Steroid hormone biosynthesis
-
00140
-
vanillin biosynthesis I
-
-
PWY-5665
bacterial bioluminescence
-
-
PWY-7723
bile acid biosynthesis, neutral pathway
-
-
PWY-6061
Primary bile acid biosynthesis
-
00120
-
bile acid biosynthesis, neutral pathway
bile acid biosynthesis, neutral pathway
-
-
(S)-reticuline biosynthesis I
-
-
PWY-3581
berberine biosynthesis
-
-
PWY-3901
chelerythrine biosynthesis
-
-
PWY-7507
noscapine biosynthesis
-
-
PWY-7138
C20 prostanoid biosynthesis
-
-
PWY66-374
ethylene biosynthesis III (microbes)
-
-
PWY-6854
caffeine degradation III (bacteria, via demethylation)
-
-
PWY-6538
Purine metabolism
-
00230
-
theophylline degradation
-
-
PWY-6999
palmatine biosynthesis
-
-
PWY-5470
L-arginine biosynthesis I (via L-ornithine)
-
-
ARGSYN-PWY
L-arginine biosynthesis II (acetyl cycle)
-
-
ARGSYNBSUB-PWY
L-arginine biosynthesis IV (archaebacteria)
-
-
PWY-7400
L-citrulline biosynthesis
-
-
CITRULBIO-PWY
L-citrulline degradation
-
-
CITRULLINE-DEG-PWY
L-proline biosynthesis II (from arginine)
-
-
PWY-4981
urea cycle
Glycerophospholipid metabolism
-
00564
-
anandamide biosynthesis I
-
-
PWY-8051
anandamide biosynthesis II
-
-
PWY-8053
CDP-diacylglycerol biosynthesis I
-
-
PWY-5667
CDP-diacylglycerol biosynthesis II
-
-
PWY0-1319
diacylglycerol and triacylglycerol biosynthesis
-
-
TRIGLSYN-PWY
oleate biosynthesis III (cyanobacteria)
-
-
PWY-7587
palmitoyl ethanolamide biosynthesis
-
-
PWY-8055
phosphatidate biosynthesis (yeast)
-
-
PWY-7411
stigma estolide biosynthesis
-
-
PWY-6453
CDP-diacylglycerol biosynthesis
CDP-diacylglycerol biosynthesis
-
-
mitochondrial L-carnitine shuttle
-
-
PWY-6111
carnitine metabolism
carnitine metabolism
-
-
Steroid biosynthesis
-
00100
-
sterol:steryl ester interconversion (yeast)
-
-
PWY-7424
(5Z)-dodecenoate biosynthesis I
-
-
PWY0-862
Fatty acid biosynthesis
-
00061
-
fatty acid biosynthesis (plant mitochondria)
-
-
PWY-6799
fatty acid biosynthesis initiation I
-
-
PWY-4381
fatty acid biosynthesis initiation II
-
-
PWY-5966
fatty acid biosynthesis initiation III
-
-
PWY-5965
fatty acid elongation -- saturated
-
-
FASYN-ELONG-PWY
mupirocin biosynthesis
-
-
PWY-8012
octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
-
-
PWY-7388
oleate biosynthesis IV (anaerobic)
-
-
PWY-7664
palmitate biosynthesis I (animals and fungi)
-
-
PWY-5994
palmitate biosynthesis II (bacteria and plants)
-
-
PWY-5971
superpathway of fatty acid biosynthesis initiation (E. coli)
-
-
FASYN-INITIAL-PWY
glycogen biosynthesis II (from UDP-D-Glucose)
-
-
PWY-5067
Starch and sucrose metabolism
-
00500
-
glycogen biosynthesis
glycogen biosynthesis
-
-
Ascorbate and aldarate metabolism
-
00053
-
heme degradation I
-
-
PWY-5874
Porphyrin and chlorophyll metabolism
-
00860
-
saponin biosynthesis II
-
-
PWY-5756
thyroid hormone metabolism II (via conjugation and/or degradation)
-
-
PWY-6261
NAD metabolism
NAD metabolism
-
-
2'-deoxymugineic acid phytosiderophore biosynthesis
-
-
PWY-5912
ethylene biosynthesis I (plants)
-
-
ETHYL-PWY
L-methionine degradation I (to L-homocysteine)
-
-
METHIONINE-DEG1-PWY
S-adenosyl-L-methionine biosynthesis
-
-
SAM-PWY
S-adenosyl-L-methionine cycle II
-
-
PWY-5041
methionine metabolism
methionine metabolism
-
-
(R)-cysteate degradation
-
-
PWY-6642
Alanine, aspartate and glutamate metabolism
-
00250
-
anaerobic energy metabolism (invertebrates, cytosol)
-
-
PWY-7383
C4 photosynthetic carbon assimilation cycle, NAD-ME type
-
-
PWY-7115
C4 photosynthetic carbon assimilation cycle, PEPCK type
-
-
PWY-7117
Carbon fixation in photosynthetic organisms
-
00710
-
coenzyme M biosynthesis II
-
-
PWY-6643
L-asparagine degradation III (mammalian)
-
-
ASPARAGINE-DEG1-PWY-1
L-aspartate biosynthesis
-
-
ASPARTATESYN-PWY
L-aspartate degradation I
-
-
ASPARTATE-DEG1-PWY
L-aspartate degradation II
-
-
MALATE-ASPARTATE-SHUTTLE-PWY
L-glutamate degradation II
-
-
GLUTDEG-PWY
L-phenylalanine biosynthesis I
-
-
PHESYN
L-phenylalanine degradation II (anaerobic)
-
-
ANAPHENOXI-PWY
L-phenylalanine degradation III
-
-
PWY-5079
L-phenylalanine degradation VI (Stickland reaction)
-
-
PWY-8014
Novobiocin biosynthesis
-
00401
-
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
Phenylalanine, tyrosine and tryptophan biosynthesis
-
00400
-
sulfolactate degradation III
-
-
PWY-6638
aspartate and asparagine metabolism
aspartate and asparagine metabolism
-
-
C4 and CAM-carbon fixation
C4 and CAM-carbon fixation
-
-
coenzyme M biosynthesis
coenzyme M biosynthesis
-
-
cysteine metabolism
cysteine metabolism
-
-
gluconeogenesis
gluconeogenesis
-
-
glutamate and glutamine metabolism
glutamate and glutamine metabolism
-
-
L-alanine biosynthesis II
-
-
ALANINE-SYN2-PWY
L-alanine degradation III
-
-
ALANINE-DEG3-PWY
3-phosphoinositide biosynthesis
-
-
PWY-6352
Inositol phosphate metabolism
-
00562
-
Amino sugar and nucleotide sugar metabolism
-
00520
-
creatine-phosphate biosynthesis
-
-
PWY-6158
retinol biosynthesis
-
-
PWY-6857
triacylglycerol degradation
-
-
LIPAS-PWY
lipid metabolism
lipid metabolism
-
-
diethylphosphate degradation
-
-
PWY-5491
Folate biosynthesis
-
00790
-
NAD phosphorylation and dephosphorylation
-
-
NADPHOS-DEPHOS-PWY
NAD salvage pathway III (to nicotinamide riboside)
-
-
NAD-BIOSYNTHESIS-II
NAD/NADH phosphorylation and dephosphorylation
-
-
PWY-5083
Thiamine metabolism
-
00730
-
sulfopterin metabolism
sulfopterin metabolism
-
-
phosphate acquisition
-
-
PWY-6348
Riboflavin metabolism
-
00740
-
vitamin B1 metabolism
vitamin B1 metabolism
-
-
Galactose metabolism
-
00052
-
sucrose degradation III (sucrose invertase)
-
-
PWY-621
sucrose degradation V (sucrose alpha-glucosidase)
-
-
PWY66-373
metabolism of disaccharids
metabolism of disaccharids
-
-
Glycosaminoglycan degradation
-
00531
-
Peptidoglycan biosynthesis
-
00550
-
peptidoglycan biosynthesis II (staphylococci)
-
-
PWY-5265
peptidoglycan biosynthesis IV (Enterococcus faecium)
-
-
PWY-6471
peptidoglycan maturation (meso-diaminopimelate containing)
-
-
PWY0-1586
peptidoglycan biosynthesis
peptidoglycan biosynthesis
-
-
Atrazine degradation
-
00791
-
urea degradation II
-
-
PWY-5704
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
-
-
PWY-6147
6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium)
-
-
PWY-7852
drosopterin and aurodrosopterin biosynthesis
-
-
PWY-7442
erythro-tetrahydrobiopterin biosynthesis I
-
-
PWY-5663
erythro-tetrahydrobiopterin biosynthesis II
-
-
PWY-5664
preQ0 biosynthesis
-
-
PWY-6703
tetrahydromonapterin biosynthesis
-
-
PWY0-1433
threo-tetrahydrobiopterin biosynthesis
-
-
PWY-6983
tetrahydrofolate metabolism
tetrahydrofolate metabolism
-
-
purine metabolism
purine metabolism
-
-
(S)-reticuline biosynthesis II
-
-
PWY-6133
hydroxycinnamic acid tyramine amides biosynthesis
-
-
PWY-5474
Methane metabolism
-
00680
-
methanofuran biosynthesis
-
-
PWY-5254
octopamine biosynthesis
-
-
PWY-7297
tyrosine metabolism
tyrosine metabolism
-
-
1,3-propanediol biosynthesis (engineered)
-
-
PWY-7385
Calvin-Benson-Bassham cycle
-
-
CALVIN-PWY
formaldehyde assimilation II (assimilatory RuMP Cycle)
-
-
PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
-
-
P185-PWY
Fructose and mannose metabolism
-
00051
-
gluconeogenesis I
-
-
GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
-
-
PWY-6142
gluconeogenesis III
-
-
PWY66-399
glycolysis I (from glucose 6-phosphate)
-
-
GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
-
-
PWY-5484
glycolysis III (from glucose)
-
-
ANAGLYCOLYSIS-PWY
glycolysis IV (plant cytosol)
-
-
PWY-1042
glycolysis V (Pyrococcus)
-
-
P341-PWY
sucrose biosynthesis I (from photosynthesis)
-
-
SUCSYN-PWY
glycolysis
glycolysis
-
-
photosynthesis
photosynthesis
-
-
Aflatoxin biosynthesis
-
00254
-
jadomycin biosynthesis
-
-
PWY-6679
CO2 fixation in Crenarchaeota
CO2 fixation in Crenarchaeota
-
-
oleandomycin activation/inactivation
-
-
PWY-6972
ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY hide
LITERATURE
SOURCE
LINKS TO OTHER DATABASES (specific for Coptis chinensis)