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Information on Organism Citrobacter amalonaticus

Synonyms:
ATCC 25405; CCUG 4860; CECT 863; CIP 82.89; Citrobacter amalonaticus; Citrobacter amalonaticus (Young et al. 1971) Brenner and Farmer 1982; Citrobacter intermedius biogroup a; DSM 4593; JCM 1661; Levinea amalonatica; Levinea amalonatica Young et al. 1971 (Approved Lists 1980); LMG 7873; LMG:7873; NCTC 10805;
Word Map for Organism Citrobacter amalonaticus
TaxTree of Organism Citrobacter amalonaticus
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Proteobacteria can be found in Brenda BRENDA pathways(phylum)
Gammaproteobacteria can be found in Brenda BRENDA pathways(class)
Enterobacterales can be found in Brenda BRENDA pathways(order)
Enterobacteriaceae can be found in Brenda BRENDA pathways(family)
Citrobacter can be found in Brenda BRENDA pathways(genus)
Citrobacter amalonaticus can be found in Brenda BRENDA pathways(species)
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EC NUMBER
COMMENTARY hide
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
1-butanol autotrophic biosynthesis (engineered)
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PWY-6886
alanine metabolism
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Alanine, aspartate and glutamate metabolism
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aminopropylcadaverine biosynthesis
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PWY0-1303
anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
Arginine and proline metabolism
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Arginine biosynthesis
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arginine metabolism
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Atrazine degradation
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autoinducer AI-1 biosynthesis
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PWY-6157
avenanthramide biosynthesis
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PWY-8157
benzoate biosynthesis II (CoA-independent, non-beta-oxidative)
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PWY-6444
Bifidobacterium shunt
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P124-PWY
Biosynthesis of secondary metabolites
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bisucaberin biosynthesis
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PWY-6381
C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
C4 photosynthetic carbon assimilation cycle, PEPCK type
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PWY-7117
C5-Branched dibasic acid metabolism
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cadaverine biosynthesis
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PWY0-1601
Caffeine metabolism
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Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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carbon tetrachloride degradation II
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PWY-5372
cinnamoyl-CoA biosynthesis
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PWY-6457
Cysteine and methionine metabolism
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desferrioxamine B biosynthesis
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PWY-6376
desferrioxamine E biosynthesis
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PWY-6375
Drug metabolism - other enzymes
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Entner-Doudoroff pathway I
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PWY-8004
Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
Entner-Doudoroff pathway III (semi-phosphorylative)
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PWY-2221
ephedrine biosynthesis
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PWY-5883
ethene biosynthesis V (engineered)
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PWY-7124
formaldehyde assimilation I (serine pathway)
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PWY-1622
gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
gluconeogenesis III
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PWY66-399
glutamate and glutamine metabolism
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Glutathione metabolism
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glycerol degradation to butanol
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PWY-7003
glycolysis
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Glycolysis / Gluconeogenesis
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glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
glycolysis V (Pyrococcus)
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P341-PWY
Glyoxylate and dicarboxylate metabolism
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heterolactic fermentation
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P122-PWY
histamine biosynthesis
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PWY-6173
Histidine metabolism
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histidine metabolism
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hydrogen production VI
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PWY-6780
Inositol phosphate metabolism
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L-alanine biosynthesis II
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ALANINE-SYN2-PWY
L-alanine degradation II (to D-lactate)
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ALACAT2-PWY
L-alanine degradation III
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ALANINE-DEG3-PWY
L-alanine degradation V (oxidative Stickland reaction)
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PWY-8189
L-alanine degradation VI (reductive Stickland reaction)
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PWY-8188
L-arginine degradation V (arginine deiminase pathway)
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ARGDEGRAD-PWY
L-arginine degradation XIII (reductive Stickland reaction)
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PWY-8187
L-arginine degradation XIV (oxidative Stickland reaction)
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PWY-6344
L-glutamate degradation VI (to pyruvate)
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PWY-5087
L-lysine degradation I
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PWY0-461
L-lysine degradation X
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PWY-6328
lipid metabolism
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lupanine biosynthesis
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PWY-5468
Lysine degradation
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lysine metabolism
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Metabolic pathways
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Methane metabolism
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methanogenesis from acetate
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METH-ACETATE-PWY
methyl indole-3-acetate interconversion
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PWY-6303
methylaspartate cycle
methylsalicylate degradation
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PWY18C3-24
Microbial metabolism in diverse environments
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Nitrotoluene degradation
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non-pathway related
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Penicillin and cephalosporin biosynthesis
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phenol degradation
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Phenylalanine metabolism
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Phenylpropanoid biosynthesis
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phenylpropanoid biosynthesis
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phenylpropanoid biosynthesis, initial reactions
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PWY1F-467
photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
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PWY-7218
phytate degradation I
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PWY-4702
polyamine pathway
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Purine metabolism
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putrescine biosynthesis III
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PWY-46
reductive acetyl coenzyme A pathway
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reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
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CODH-PWY
retinol biosynthesis
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PWY-6857
rosmarinic acid biosynthesis I
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PWY-5048
Rubisco shunt
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PWY-5723
suberin monomers biosynthesis
Sulfur metabolism
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superpathway of glucose and xylose degradation
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PWY-6901
superpathway of methylsalicylate metabolism
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PWY18C3-25
superpathway of ornithine degradation
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ORNDEG-PWY
superpathway of photosynthetic hydrogen production
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PWY-7731
Tropane, piperidine and pyridine alkaloid biosynthesis
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Ubiquinone and other terpenoid-quinone biosynthesis
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urea cycle
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urea degradation II
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PWY-5704
vitamin K-epoxide cycle
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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LINKS TO OTHER DATABASES (specific for Citrobacter amalonaticus)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA