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TaxTree of Organism Ciona intestinalis
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EC NUMBER 
COMMENTARY 
-
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(3R)-N-[(2S)-1-hydroxy-6-[(3R)-3-isocyanobutanamido]hexan-2-yl]-3-isocyanobutanamide biosynthesis
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-
PWY-8320
(S)-lactate fermentation to propanoate, acetate and hydrogen
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-
PWY-8086
(S)-propane-1,2-diol degradation
-
-
PWY-7013
(S)-reticuline biosynthesis I
-
-
PWY-3581
(S)-reticuline biosynthesis II
-
-
PWY-6133
1,5-anhydrofructose degradation
-
-
PWY-6992
15-epi-lipoxin biosynthesis
-
-
PWY66-393
2,3-dihydroxybenzoate biosynthesis
-
-
PWY-5901
2-arachidonoylglycerol biosynthesis
-
-
PWY-8052
2-carboxy-1,4-naphthoquinol biosynthesis
-
-
PWY-5837
2-methyl-branched fatty acid beta-oxidation
-
-
PWY-8181
2-nitrotoluene degradation
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-
PWY-5641
3-methylbutanol biosynthesis (engineered)
-
-
PWY-6871
3-phosphoinositide biosynthesis
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-
PWY-6352
3-phosphoinositide degradation
-
-
PWY-6368
4-hydroxy-2-nonenal detoxification
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-
PWY-7112
4-oxopentanoate degradation
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-
PWY-7948
5-nitroanthranilate degradation
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-
PWY-7044
6-gingerol analog biosynthesis (engineered)
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-
PWY-6920
8-oxo-(d)GTP detoxification I
-
-
PWY-6502
ABH and Lewis epitopes biosynthesis from type 1 precursor disaccharide
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-
PWY-7832
acetaldehyde biosynthesis I
-
-
PWY-6333
acetone degradation I (to methylglyoxal)
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-
PWY-5451
acetone degradation III (to propane-1,2-diol)
-
-
PWY-7466
acetyl-CoA biosynthesis from citrate
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-
PWY-5172
acetylene degradation (anaerobic)
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-
P161-PWY
acrylonitrile degradation I
-
-
PWY-7308
adenosine deoxyribonucleotides de novo biosynthesis I
-
-
PWY-7227
adenosine deoxyribonucleotides de novo biosynthesis II
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-
PWY-7220
aerobic respiration I (cytochrome c)
-
-
PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
alpha-linolenate metabolites biosynthesis
-
-
PWY-8398
Amaryllidacea alkaloids biosynthesis
-
-
PWY-7826
ammonia assimilation cycle I
-
-
PWY-6963
ammonia oxidation II (anaerobic)
-
-
P303-PWY
anaerobic energy metabolism (invertebrates, mitochondrial)
-
-
PWY-7384
anandamide biosynthesis I
-
-
PWY-8051
anandamide biosynthesis II
-
-
PWY-8053
anandamide degradation
-
-
PWY6666-1
anandamide lipoxygenation
-
-
PWY-8056
arachidonate metabolites biosynthesis
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-
PWY-8397
arsenite to oxygen electron transfer
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-
PWY-4521
arsenite to oxygen electron transfer (via azurin)
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-
PWY-7429
aspirin triggered resolvin D biosynthesis
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-
PWY66-395
aspirin triggered resolvin E biosynthesis
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-
PWY66-394
ATP biosynthesis
-
-
PWY-7980
bacterial bioluminescence
-
-
PWY-7723
baicalein degradation (hydrogen peroxide detoxification)
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-
PWY-7214
betalamic acid biosynthesis
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-
PWY-5394
betanidin degradation
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-
PWY-5461
Bifidobacterium shunt
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-
P124-PWY
bupropion degradation
-
-
PWY66-241
butanol and isobutanol biosynthesis (engineered)
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-
PWY-7396
C20 prostanoid biosynthesis
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-
PWY66-374
Calvin-Benson-Bassham cycle
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-
CALVIN-PWY
camalexin biosynthesis
-
-
CAMALEXIN-SYN
canavanine degradation
-
-
PWY-31
cannabinoid biosynthesis
-
-
PWY-5140
catechol degradation to 2-hydroxypentadienoate I
-
-
P183-PWY
catechol degradation to 2-hydroxypentadienoate II
-
-
PWY-5419
catecholamine biosynthesis
cellulose biosynthesis
-
-
PWY-1001
cellulose degradation II (fungi)
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-
PWY-6788
choline biosynthesis III
-
-
PWY-3561
chondroitin sulfate biosynthesis
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-
PWY-6567
CMP phosphorylation
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-
PWY-7205
creatine biosynthesis
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-
GLYCGREAT-PWY
creatine phosphate biosynthesis
-
-
PWY-6158
cytosolic NADPH production (yeast)
-
-
PWY-7268
D-xylose degradation I
-
-
XYLCAT-PWY
degradation of aromatic, nitrogen containing compounds
-
-
dermatan sulfate biosynthesis
-
-
PWY-6568
di-homo-gamma-linolenate metabolites biosynthesis
-
-
PWY-8396
diethylphosphate degradation
-
-
PWY-5491
divinyl ether biosynthesis II
-
-
PWY-5409
docosahexaenoate metabolites biosynthesis
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-
PWY-8400
drosopterin and aurodrosopterin biosynthesis
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-
PWY-7442
dZTP biosynthesis
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-
PWY-8289
ecdysone and 20-hydroxyecdysone biosynthesis
-
-
PWY-7300
Entner-Doudoroff pathway I
-
-
PWY-8004
erythro-tetrahydrobiopterin biosynthesis I
-
-
PWY-5663
ethanol degradation I
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-
ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
-
-
PWY66-21
ethanolamine utilization
-
-
PWY0-1477
ethene biosynthesis III (microbes)
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-
PWY-6854
fatty acid biosynthesis initiation (type I)
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PWY-5966-1
fatty acid salvage
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PWY-7094
Fe(II) oxidation
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PWY-6692
firefly bioluminescence
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PWY-7913
formaldehyde assimilation II (assimilatory RuMP Cycle)
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PWY-1861
formaldehyde assimilation III (dihydroxyacetone cycle)
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P185-PWY
formaldehyde oxidation I
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RUMP-PWY
formaldehyde oxidation II (glutathione-dependent)
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PWY-1801
formate to nitrite electron transfer
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PWY0-1585
GABA shunt I
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-
GLUDEG-I-PWY
GABA shunt II
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PWY-8346
ganglio-series glycosphingolipids biosynthesis
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PWY-7836
gentisate degradation I
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PWY-6223
gliotoxin biosynthesis
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PWY-7533
globo-series glycosphingolipids biosynthesis
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PWY-7838
glucose degradation (oxidative)
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DHGLUCONATE-PYR-CAT-PWY
glutathione biosynthesis
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-
GLUTATHIONESYN-PWY
glutathione-mediated detoxification I
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PWY-4061
glutathione-mediated detoxification II
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PWY-6842
glutathione-peroxide redox reactions
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PWY-4081
glycerol-3-phosphate to fumarate electron transfer
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PWY0-1582
guanosine deoxyribonucleotides de novo biosynthesis I
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-
PWY-7226
guanosine deoxyribonucleotides de novo biosynthesis II
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PWY-7222
guanosine ribonucleotides de novo biosynthesis
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PWY-7221
heme a biosynthesis
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PWY-7856
heterolactic fermentation
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P122-PWY
histamine biosynthesis
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PWY-6173
hydrogen to fumarate electron transfer
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PWY0-1576
icosapentaenoate metabolites biosynthesis
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PWY-8399
incomplete reductive TCA cycle
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P42-PWY
indole glucosinolate activation (intact plant cell)
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PWYQT-4477
indole-3-acetate biosynthesis II
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PWY-581
indole-3-acetate biosynthesis III (bacteria)
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PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
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PWY-5025
jadomycin biosynthesis
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PWY-6679
jasmonic acid biosynthesis
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PWY-735
justicidin B biosynthesis
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PWY-6824
L-arginine degradation I (arginase pathway)
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-
ARGASEDEG-PWY
L-arginine degradation VI (arginase 2 pathway)
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ARG-PRO-PWY
L-arginine degradation VII (arginase 3 pathway)
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-
ARG-GLU-PWY
L-arginine degradation X (arginine monooxygenase pathway)
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ARGDEG-V-PWY
L-citrulline biosynthesis
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-
CITRULBIO-PWY
L-dopa and L-dopachrome biosynthesis
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-
PWY-6481
L-glutamate biosynthesis IV
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-
GLUGLNSYN-PWY
L-glutamate degradation IX (via 4-aminobutanoate)
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PWY0-1305
L-histidine degradation V
-
-
PWY-5031
L-isoleucine degradation II
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PWY-5078
L-leucine degradation III
-
-
PWY-5076
L-methionine degradation III
-
-
PWY-5082
L-Ndelta-acetylornithine biosynthesis
-
-
PWY-6922
L-phenylalanine degradation III
-
-
PWY-5079
L-selenocysteine biosynthesis I (bacteria)
-
-
PWY0-901
L-selenocysteine biosynthesis II (archaea and eukaryotes)
-
-
PWY-6281
L-tryptophan degradation V (side chain pathway)
-
-
PWY-3162
L-tyrosine degradation III
-
-
PWY3O-4108
L-valine degradation II
-
-
PWY-5057
lanosterol biosynthesis
-
-
PWY-6132
leukotriene biosynthesis
-
-
PWY66-375
linoleate metabolites biosynthesis
-
-
PWY-8395
lipoxin biosynthesis
-
-
PWY66-392
luteolin triglucuronide degradation
-
-
PWY-7445
maresin biosynthesis
-
-
PWY-8356
matairesinol biosynthesis
-
-
PWY-5466
melatonin degradation I
-
-
PWY-6398
menaquinol-4 biosynthesis II
-
-
PWY-7998
methyl indole-3-acetate interconversion
-
-
PWY-6303
methylaspartate cycle
methylsalicylate degradation
-
-
PWY18C3-24
mitochondrial NADPH production (yeast)
-
-
PWY-7269
mixed acid fermentation
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-
FERMENTATION-PWY
mRNA capping I
-
-
PWY-7375
mucin core 1 and core 2 O-glycosylation
-
-
PWY-7433
NAD(P)/NADPH interconversion
-
-
PWY-5083
NADH to cytochrome bd oxidase electron transfer I
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-
PWY0-1334
NADH to cytochrome bd oxidase electron transfer II
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-
PWY0-1568
NADH to cytochrome bo oxidase electron transfer I
-
-
PWY0-1335
NADH to cytochrome bo oxidase electron transfer II
-
-
PWY0-1567
NADH to fumarate electron transfer
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-
PWY0-1336
NADPH to cytochrome c oxidase via plastocyanin
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-
PWY-8271
nicotine degradation IV
-
-
PWY66-201
nicotine degradation V
-
-
PWY66-221
nitrate reduction I (denitrification)
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-
DENITRIFICATION-PWY
nitrate reduction VII (denitrification)
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-
PWY-6748
nitrate reduction VIIIb (dissimilatory)
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-
PWY0-1573
nitrate reduction X (dissimilatory, periplasmic)
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-
PWY0-1584
nitric oxide biosynthesis II (mammals)
-
-
PWY-4983
nitrifier denitrification
-
-
PWY-7084
nitrite-dependent anaerobic methane oxidation
-
-
PWY-6523
nocardicin A biosynthesis
-
-
PWY-7797
noradrenaline and adrenaline degradation
-
-
PWY-6342
o-diquinones biosynthesis
-
-
PWY-6752
octane oxidation
-
-
P221-PWY
ophthalmate biosynthesis
-
-
PWY-8043
palmitate biosynthesis II (type II fatty acid synthase)
-
-
PWY-5971
partial TCA cycle (obligate autotrophs)
-
-
PWY-5913
pentachlorophenol degradation
-
-
PCPDEG-PWY
pentose phosphate pathway (non-oxidative branch) I
-
-
NONOXIPENT-PWY
pentose phosphate pathway (non-oxidative branch) II
-
-
PWY-8178
pentose phosphate pathway (oxidative branch) I
-
-
OXIDATIVEPENT-PWY
pentose phosphate pathway (partial)
-
-
P21-PWY
peptido-conjugates in tissue regeneration biosynthesis
-
-
PWY-8355
phenylethanol biosynthesis
-
-
PWY-5751
pheomelanin biosynthesis
-
-
PWY-7917
phosphatidate metabolism, as a signaling molecule
-
-
PWY-7039
phosphatidylcholine acyl editing
-
-
PWY-6803
phospholipases
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-
LIPASYN-PWY
phospholipid remodeling (phosphatidate, yeast)
-
-
PWY-7417
phospholipid remodeling (phosphatidylcholine, yeast)
-
-
PWY-7416
phospholipid remodeling (phosphatidylethanolamine, yeast)
-
-
PWY-7409
photosynthesis light reactions
-
-
PWY-101
phytochelatins biosynthesis
-
-
PWY-6745
phytol degradation
-
-
PWY66-389
plasmalogen biosynthesis I (aerobic)
-
-
PWY-7782
plasmalogen degradation
-
-
PWY-7783
ppGpp metabolism
-
-
PPGPPMET-PWY
procollagen hydroxylation and glycosylation
-
-
PWY-7894
protectin biosynthesis
-
-
PWY-8357
protein S-nitrosylation and denitrosylation
-
-
PWY-7798
protein ubiquitination
-
-
PWY-7511
purine deoxyribonucleosides salvage
-
-
PWY-7224
putrescine biosynthesis III
-
-
PWY-46
pyrimidine deoxyribonucleosides degradation
-
-
PWY-7181
pyrimidine deoxyribonucleosides salvage
-
-
PWY-7199
pyrimidine deoxyribonucleotide phosphorylation
-
-
PWY-7197
pyrimidine deoxyribonucleotides biosynthesis from CTP
-
-
PWY-7210
pyrimidine deoxyribonucleotides de novo biosynthesis I
-
-
PWY-7184
pyrimidine deoxyribonucleotides de novo biosynthesis II
-
-
PWY-7187
pyrimidine deoxyribonucleotides de novo biosynthesis III
-
-
PWY-6545
pyrimidine deoxyribonucleotides de novo biosynthesis IV
-
-
PWY-7198
pyrimidine deoxyribonucleotides dephosphorylation
-
-
PWY-7206
pyrimidine ribonucleosides degradation
-
-
PWY0-1295
pyrimidine ribonucleosides salvage I
-
-
PWY-7193
pyrimidine ribonucleosides salvage II
-
-
PWY-6556
pyruvate fermentation to (S)-lactate
-
-
PWY-5481
pyruvate fermentation to ethanol I
-
-
PWY-5480
pyruvate fermentation to ethanol II
-
-
PWY-5486
pyruvate fermentation to ethanol III
-
-
PWY-6587
pyruvate fermentation to isobutanol (engineered)
-
-
PWY-7111
pyruvate fermentation to propanoate I
-
-
P108-PWY
reactive oxygen species degradation
-
-
DETOX1-PWY-1
reductive TCA cycle I
-
-
P23-PWY
reductive TCA cycle II
-
-
PWY-5392
resolvin D biosynthesis
-
-
PWY66-397
retinoate biosynthesis I
-
-
PWY-6872
retinol biosynthesis
-
-
PWY-6857
rosmarinic acid biosynthesis II
-
-
PWY-5049
Rubisco shunt
-
-
PWY-5723
salicylate biosynthesis I
-
-
PWY-6406
salicylate biosynthesis II
-
-
PWY-8321
salidroside biosynthesis
-
-
PWY-6802
serotonin and melatonin biosynthesis
-
-
PWY-6030
serotonin degradation
-
-
PWY-6313
sesamin biosynthesis
-
-
PWY-5469
sphingolipid biosynthesis (mammals)
-
-
PWY-7277
sphingomyelin metabolism
-
-
PWY3DJ-11281
sporopollenin precursors biosynthesis
-
-
PWY-6733
succinate to chytochrome c oxidase via cytochrome c6
-
-
PWY1YI0-2
succinate to cytochrome bd oxidase electron transfer
-
-
PWY0-1353
succinate to cytochrome bo oxidase electron transfer
-
-
PWY0-1329
succinate to cytochrome c oxidase via plastocyanin
-
-
PWY1YI0-3
succinate to plastoquinol oxidase
-
-
PWY1YI0-8
superoxide radicals degradation
-
-
DETOX1-PWY
superpathway of fermentation (Chlamydomonas reinhardtii)
-
-
PWY4LZ-257
superpathway of glucose and xylose degradation
-
-
PWY-6901
superpathway of glycolysis and the Entner-Doudoroff pathway
-
-
GLYCOLYSIS-E-D
superpathway of glyoxylate cycle and fatty acid degradation
-
-
PWY-561
superpathway of methylsalicylate metabolism
-
-
PWY18C3-25
superpathway of ornithine degradation
-
-
ORNDEG-PWY
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
-
-
PWY0-166
TCA cycle I (prokaryotic)
-
-
TCA
TCA cycle II (plants and fungi)
-
-
PWY-5690
TCA cycle III (animals)
-
-
PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
-
-
P105-PWY
TCA cycle V (2-oxoglutarate synthase)
-
-
PWY-6969
TCA cycle VI (Helicobacter)
-
-
REDCITCYC
TCA cycle VII (acetate-producers)
-
-
PWY-7254
TCA cycle VIII (Chlamydia)
-
-
TCA-1
testosterone and androsterone degradation to androstendione (aerobic)
-
-
PWY-6943
the visual cycle I (vertebrates)
-
-
PWY-6861
threo-tetrahydrobiopterin biosynthesis
-
-
PWY-6983
thyroid hormone biosynthesis
toluene degradation II (aerobic) (via 4-methylcatechol)
-
-
TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
-
-
TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
-
-
TOLUENE-DEG-2-OH-PWY
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
-
-
PWY-5410
triacylglycerol degradation
-
-
LIPAS-PWY
tRNA processing
-
-
PWY0-1479
UMP biosynthesis I
-
-
PWY-5686
UMP biosynthesis II
-
-
PWY-7790
urea cycle
UTP and CTP de novo biosynthesis
-
-
PWY-7176
valproate beta-oxidation
-
-
PWY-8182
vanillin biosynthesis I
-
-
PWY-5665
vitamin K-epoxide cycle
xanthommatin biosynthesis
-
-
PWY-8249
xyloglucan degradation II (exoglucanase)
-
-
PWY-6807
catecholamine biosynthesis
-
-
PWY66-301
methylaspartate cycle
-
-
PWY-6728
thyroid hormone biosynthesis
-
-
PWY-6241
urea cycle
-
-
PWY-4984
vitamin K-epoxide cycle
-
-
PWY-7999
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ORGANISM
COMMENTARY
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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SOURCE TISSUE
ORGANISM
UNIPROT
COMMENTARY
LITERATURE
SOURCE
-
predominant expression in the dorsal part of zone VII of the endostyle
TPHexpressing neurons form two clusters in the anterior central nervous system at the level of the visceral ganglion
-
predominantly expressed in ocellus photoreceptor cells of the larva
TPH expression pattern during development, TPH expression was found from tailbud stage in the precursor cells of the visceral ganglion and in the tail
-
exclusively expressed in the testis, mainly in the germ cells during the late stage of spermatogenesis, and is localized in the sperm head and tail
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY
GeneOntology No.
LITERATURE
SOURCE
LINKS TO OTHER DATABASES (specific for Ciona intestinalis)
SILVA: 16S/18S rRNA, 23S/28S rRNA
Use of this online version of BRENDA is free under the CC BY 4.0 license. See terms of use for full details.
Release 2023.1 (January 2023)
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