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Information on Organism Bradyrhizobium diazoefficiens

Synonyms:
3I1B110; ACCC 15034; BCRC 13528; Bradyrhizobium diazoefficiens Delamuta et al. 2013; Bradyrhizobium diazoefficiens; Bradyrhizobium japonicum group Ia; Bradyrhizobium sp. BMP17; Bradyrhizobium sp. CCBAU 41267; Bradyrhizobium sp. SEMIA 5060; Bradyrhizobium sp. SEMIA 6059; CCRC 13528; CCRC:13528; CCT 4249; CNPSo 46; culture-collection:NRRL:B:4361; culture-collection:NRRL:B:4450; IAM 13628; IFO 14792; JCM 10833; NBRC 14792; NRRL B-4361; NRRL B-4450; R-12974; SEMIA 5032; TAL 102; TISTR 339; USDA 110; Bradyrhizobium sp. BMP 7; bradyrhziobium japonicum;
Word Map for Organism Bradyrhizobium diazoefficiens
TaxTree of Organism Bradyrhizobium diazoefficiens
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Proteobacteria can be found in Brenda BRENDA pathways(phylum)
Alphaproteobacteria can be found in Brenda BRENDA pathways(class)
Hyphomicrobiales can be found in Brenda BRENDA pathways(order)
Bradyrhizobiaceae can be found in Brenda BRENDA pathways(family)
Bradyrhizobium can be found in Brenda BRENDA pathways(genus)
Bradyrhizobium diazoefficiens can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
1,3-propanediol biosynthesis (engineered)
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PWY-7385
2-nitrotoluene degradation
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PWY-5641
acrylonitrile degradation I
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PWY-7308
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration II (cytochrome c) (yeast)
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PWY-7279
aerobic toluene degradation
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alanine metabolism
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Alanine, aspartate and glutamate metabolism
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all-trans-farnesol biosynthesis
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PWY-6859
alpha-linolenate metabolites biosynthesis
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PWY-8398
alpha-Linolenic acid metabolism
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Amino sugar and nucleotide sugar metabolism
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Aminobenzoate degradation
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ammonia oxidation II (anaerobic)
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P303-PWY
anaerobic energy metabolism (invertebrates, cytosol)
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PWY-7383
Arginine and proline metabolism
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Arginine biosynthesis
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arginine metabolism
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bacterial bioluminescence
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PWY-7723
Benzoate degradation
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beta-Alanine metabolism
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Biosynthesis of secondary metabolites
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bisabolene biosynthesis (engineered)
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PWY-7102
Butanoate metabolism
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C4 and CAM-carbon fixation
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C4 photosynthetic carbon assimilation cycle, NAD-ME type
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PWY-7115
Carbon fixation in photosynthetic organisms
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Carbon fixation pathways in prokaryotes
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catechol degradation to 2-hydroxypentadienoate I
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P183-PWY
catechol degradation to 2-hydroxypentadienoate II
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PWY-5419
Chloroalkane and chloroalkene degradation
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Chlorocyclohexane and chlorobenzene degradation
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chorismate biosynthesis from 3-dehydroquinate
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PWY-6163
chorismate metabolism
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Citrate cycle (TCA cycle)
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citric acid cycle
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CMP-legionaminate biosynthesis I
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PWY-6749
Cyanoamino acid metabolism
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Cysteine and methionine metabolism
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D-myo-inositol (1,4,5)-trisphosphate degradation
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PWY-6363
degradation of aromatic, nitrogen containing compounds
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denitrification
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diethylphosphate degradation
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PWY-5491
dimethyl sulfide biosynthesis from methionine
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PWY-7793
Diterpenoid biosynthesis
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divinyl ether biosynthesis II
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PWY-5409
drosopterin and aurodrosopterin biosynthesis
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PWY-7442
ent-kaurene biosynthesis I
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PWY-5032
Fe(II) oxidation
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PWY-6692
flavin biosynthesis
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Folate biosynthesis
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folate transformations I
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PWY-2201
folate transformations II (plants)
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PWY-3841
folate transformations III (E. coli)
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1CMET2-PWY
formaldehyde assimilation I (serine pathway)
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PWY-1622
formaldehyde assimilation II (assimilatory RuMP Cycle)
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PWY-1861
formaldehyde oxidation I
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RUMP-PWY
formate to nitrite electron transfer
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PWY0-1585
Fructose and mannose metabolism
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Galactose metabolism
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gluconeogenesis I
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GLUCONEO-PWY
gluconeogenesis III
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PWY66-399
glucose degradation (oxidative)
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DHGLUCONATE-PYR-CAT-PWY
Glutathione metabolism
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Glycerophospholipid metabolism
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glycolysis
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Glycolysis / Gluconeogenesis
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glycolysis I (from glucose 6-phosphate)
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GLYCOLYSIS
glycolysis II (from fructose 6-phosphate)
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PWY-5484
glycolysis III (from glucose)
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ANAGLYCOLYSIS-PWY
glycolysis IV
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PWY-1042
Glycosaminoglycan degradation
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Glycosphingolipid biosynthesis - ganglio series
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Glyoxylate and dicarboxylate metabolism
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glyoxylate cycle
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GLYOXYLATE-BYPASS
guanosine nucleotides degradation II
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PWY-6606
guanosine nucleotides degradation III
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PWY-6608
hydrogen oxidation I (aerobic)
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P283-PWY
hydrogen production
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IAA biosynthesis
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incomplete reductive TCA cycle
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P42-PWY
indole glucosinolate activation (herbivore attack)
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PWYQT-4476
indole-3-acetate biosynthesis II
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PWY-581
indole-3-acetate biosynthesis III (bacteria)
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PWY-3161
indole-3-acetate biosynthesis IV (bacteria)
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PWY-5025
indole-3-acetate biosynthesis V (bacteria and fungi)
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PWY-5026
Inositol phosphate metabolism
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isoprenoid biosynthesis
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jasmonic acid biosynthesis
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PWY-735
L-arginine degradation X (arginine monooxygenase pathway)
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ARGDEG-V-PWY
L-methionine biosynthesis I
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HOMOSER-METSYN-PWY
L-methionine biosynthesis III
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HSERMETANA-PWY
L-methionine salvage from L-homocysteine
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ADENOSYLHOMOCYSCAT-PWY
linoleate metabolites biosynthesis
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PWY-8395
Linoleic acid metabolism
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malate/L-aspartate shuttle pathway
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MALATE-ASPARTATE-SHUTTLE-PWY
Metabolic pathways
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metabolism of disaccharids
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Methane metabolism
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methanol oxidation to carbon dioxide
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PWY-7616
methanol oxidation to formaldehyde II
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PWY-6510
methionine metabolism
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methyl phomopsenoate biosynthesis
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PWY-7721
methylaspartate cycle
Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
myo-inositol biosynthesis
NADPH to cytochrome c oxidase via plastocyanin
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PWY-8271
nitrate assimilation
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nitrate reduction I (denitrification)
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DENITRIFICATION-PWY
nitrate reduction II (assimilatory)
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PWY-381
nitrate reduction IV (dissimilatory)
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PWY-5674
nitrate reduction VII (denitrification)
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PWY-6748
nitrate reduction X (dissimilatory, periplasmic)
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PWY0-1584
nitric oxide biosynthesis II (mammals)
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PWY-4983
nitrifier denitrification
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PWY-7084
nitrite-dependent anaerobic methane oxidation
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PWY-6523
nitrogen fixation I (ferredoxin)
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N2FIX-PWY
Nitrogen metabolism
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Nitrotoluene degradation
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One carbon pool by folate
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Other glycan degradation
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Oxidative phosphorylation
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oxidative phosphorylation
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Pantothenate and CoA biosynthesis
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pantothenate biosynthesis
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Penicillin and cephalosporin biosynthesis
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Pentose phosphate pathway
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pentose phosphate pathway
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pentose phosphate pathway (oxidative branch) I
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OXIDATIVEPENT-PWY
Peptidoglycan biosynthesis
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peptidoglycan biosynthesis
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peptidoglycan biosynthesis II (staphylococci)
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PWY-5265
peptidoglycan biosynthesis IV (Enterococcus faecium)
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PWY-6471
peptidoglycan biosynthesis V (beta-lactam resistance)
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PWY-6470
peptidoglycan maturation (meso-diaminopimelate containing)
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PWY0-1586
phenol degradation
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Phenylalanine metabolism
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Phenylalanine, tyrosine and tryptophan biosynthesis
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phosphatidylcholine biosynthesis V
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PWY-6825
phosphatidylcholine biosynthesis VI
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PWY-6826
phosphatidylethanolamine bioynthesis
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phosphopantothenate biosynthesis I
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PANTO-PWY
Photosynthesis
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photosynthesis light reactions
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PWY-101
phytate degradation I
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PWY-4702
polyhydroxybutanoate biosynthesis
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PWY1-3
polyhydroxydecanoate biosynthesis
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PWY-6657
Purine metabolism
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purine metabolism
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purine nucleobases degradation I (anaerobic)
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P164-PWY
purine nucleobases degradation II (anaerobic)
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PWY-5497
pyruvate fermentation to propanoate I
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P108-PWY
Pyruvate metabolism
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reductive TCA cycle I
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P23-PWY
reductive TCA cycle II
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PWY-5392
Riboflavin metabolism
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Selenocompound metabolism
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Sphingolipid metabolism
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stellatic acid biosynthesis
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PWY-7736
Streptomycin biosynthesis
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Styrene degradation
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sulfopterin metabolism
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Sulfur metabolism
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superpathway of glyoxylate cycle and fatty acid degradation
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PWY-561
TCA cycle I (prokaryotic)
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TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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P105-PWY
TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VIII (Chlamydia)
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TCA-1
Terpenoid backbone biosynthesis
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Thiamine metabolism
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toluene degradation II (aerobic) (via 4-methylcatechol)
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TOLUENE-DEG-3-OH-PWY
toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol)
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TOLUENE-DEG-DIOL-PWY
toluene degradation to 2-hydroxypentadienoate I (via o-cresol)
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TOLUENE-DEG-2-OH-PWY
trans, trans-farnesyl diphosphate biosynthesis
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PWY-5123
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis
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PWY-5410
Tryptophan metabolism
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UDP-GlcNAc biosynthesis
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UDP-N-acetyl-D-galactosamine biosynthesis III
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PWY-8013
UDP-N-acetyl-D-glucosamine biosynthesis I
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UDPNAGSYN-PWY
UDP-N-acetyl-D-glucosamine biosynthesis II
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UDPNACETYLGALSYN-PWY
Xylene degradation
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xyloglucan degradation II (exoglucanase)
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PWY-6807
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LITERATURE
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LITERATURE
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LINKS TO OTHER DATABASES (specific for Bradyrhizobium diazoefficiens)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA