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Information on Organism Arabidopsis thaliana Col-0

Arabidopsis thaliana Col-0; Arabidopsis thaliana Col 0; Arabidopsis thaliana Col0;

TaxTree of Organism Arabidopsis thaliana Col-0

Condensed Tree View

cellular organisms

can be found in Brenda

BRENDA pathways

(superkingdom)

Viridiplantae can be found in Brenda

can be found in Brenda

BRENDA pathways

(kingdom)

Streptophyta can be found in Brenda

can be found in Brenda

BRENDA pathways

(phylum)

Streptophytina can be found in Brenda

can be found in Brenda

(subphylum)

Embryophyta can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Tracheophyta can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Euphyllophyta can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Spermatophyta can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Magnoliopsida can be found in Brenda

can be found in Brenda

BRENDA pathways

(class)

Mesangiospermae can be found in Brenda

can be found in Brenda

(clade)

eudicotyledons can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Gunneridae can be found in Brenda

can be found in Brenda

BRENDA pathways

(clade)

Pentapetalae can be found in Brenda

can be found in Brenda

(clade)

can be found in Brenda

BRENDA pathways

(clade)

can be found in Brenda

BRENDA pathways

(clade)

Brassicales can be found in Brenda

can be found in Brenda

BRENDA pathways

(order)

Brassicaceae can be found in Brenda

can be found in Brenda

BRENDA pathways

(family)

Camelineae can be found in Brenda

can be found in Brenda

(tribe)

Arabidopsis can be found in Brenda

can be found in Brenda

BRENDA pathways

(genus)

Arabidopsis thaliana can be found in Brenda

can be found in Brenda

BRENDA pathways

(species)

Arabidopsis thaliana Col-0

can be found in Brenda

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preliminary BRENDA-supplied EC number

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(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)

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PWY-7726

(5Z)-dodecenoate biosynthesis II

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PWY-7858

(7Z,10Z,13Z)-hexadecatrienoate biosynthesis

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PWY-7590

(aminomethyl)phosphonate degradation

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PWY-7805

(S)-reticuline biosynthesis I

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PWY-3581

1,3-beta-D-glucan biosynthesis

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PWY-6773

10-cis-heptadecenoyl-CoA degradation (yeast)

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PWY-7337

10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast)

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PWY-7339

10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)

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PWY-7338

1D-myo-inositol hexakisphosphate biosynthesis II (mammalian)

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PWY-6362

1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)

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PWY-4661

1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium)

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PWY-6372

1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3)

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PWY-6554

2'-deoxymugineic acid phytosiderophore biosynthesis

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PWY-5912

2,3-dihydroxybenzoate biosynthesis

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PWY-5901

2-arachidonoylglycerol biosynthesis

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PWY-8052

2-carboxy-1,4-naphthoquinol biosynthesis

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PWY-5837

3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)

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CHLOROPHYLL-SYN

3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)

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PWY-7159

3-(4-hydroxyphenyl)pyruvate biosynthesis

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PWY-5886

4-aminobutanoate degradation IV

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PWY-6473

4-hydroxybenzoate biosynthesis I (eukaryotes)

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PWY-5754

6-gingerol analog biosynthesis (engineered)

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PWY-6920

9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)

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PWY-7340

9-lipoxygenase and 9-allene oxide synthase pathway

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PWY-5407

abscisic acid biosynthesis

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PWY-695

abscisic acid degradation by glucosylation

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PWY-5272

acetaldehyde biosynthesis II

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PWY-6330

acrylonitrile degradation I

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PWY-7308

adenosine deoxyribonucleotides de novo biosynthesis I

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PWY-7227

adenosine deoxyribonucleotides de novo biosynthesis II

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PWY-7220

adenosine nucleotides degradation I

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PWY-6596

adenosine nucleotides degradation II

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SALVADEHYPOX-PWY

alanine metabolism

alanine metabolism

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Alanine, aspartate and glutamate metabolism

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allantoin degradation

allantoin degradation

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allantoin degradation to ureidoglycolate I (urea producing)

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PWY-5697

allantoin degradation to ureidoglycolate II (ammonia producing)

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PWY-5698

alpha-linolenate biosynthesis I (plants and red algae)

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PWY-5997

alpha-linolenate biosynthesis II (cyanobacteria)

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PWY-7598

alpha-Linolenic acid metabolism

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Amino sugar and nucleotide sugar metabolism

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Aminobenzoate degradation

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anaerobic energy metabolism (invertebrates, cytosol)

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PWY-7383

anandamide biosynthesis I

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PWY-8051

anandamide biosynthesis II

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PWY-8053

androstenedione degradation I (aerobic)

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PWY-6944

androstenedione degradation II (anaerobic)

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PWY-8152

arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)

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PWY-7601

Arginine and proline metabolism

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Arginine biosynthesis

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arginine dependent acid resistance

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PWY0-1299

arginine metabolism

arginine metabolism

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aromatic glucosinolate activation

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PWY-6684

arsenate detoxification I

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PWY-8264

Ascorbate and aldarate metabolism

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ascorbate glutathione cycle

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PWY-2261

ascorbate metabolism

ascorbate metabolism

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ascorbate recycling (cytosolic)

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PWY-6370

aspartate and asparagine metabolism

aspartate and asparagine metabolism

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assimilatory sulfate reduction II

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SULFMETII-PWY

assimilatory sulfate reduction III

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PWY-6683

assimilatory sulfate reduction IV

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PWY1ZNC-1

atromentin biosynthesis

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PWY-7518

avenanthramide biosynthesis

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PWY-8157

beta-alanine biosynthesis IV

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PWY-5760

beta-Alanine metabolism

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Bifidobacterium shunt

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P124-PWY

Biosynthesis of secondary metabolites

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Biosynthesis of siderophore group nonribosomal peptides

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Biosynthesis of unsaturated fatty acids

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brassicicene C biosynthesis

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PWY-7517

Butanoate metabolism

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butanol and isobutanol biosynthesis (engineered)

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PWY-7396

C25,25 CDP-archaeol biosynthesis

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PWY-8365

C4 and CAM-carbon fixation

C4 and CAM-carbon fixation

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C4 photosynthetic carbon assimilation cycle, NAD-ME type

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PWY-7115

C4 photosynthetic carbon assimilation cycle, NADP-ME type

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PWY-241

C4 photosynthetic carbon assimilation cycle, PEPCK type

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PWY-7117

caffeine degradation III (bacteria, via demethylation)

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PWY-6538

capsaicin biosynthesis

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PWY-5710

capsiconiate biosynthesis

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PWY-6027

Carbon fixation in photosynthetic organisms

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Carbon fixation pathways in prokaryotes

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cardenolide glucosides biosynthesis

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PWY-6036

Carotenoid biosynthesis

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CDP-diacylglycerol biosynthesis

CDP-diacylglycerol biosynthesis

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CDP-diacylglycerol biosynthesis I

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PWY-5667

CDP-diacylglycerol biosynthesis II

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PWY0-1319

cell-surface glycoconjugate-linked phosphocholine biosynthesis

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PWY-7886

ceramide and sphingolipid recycling and degradation (yeast)

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PWY-7119

ceramide degradation (generic)

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PWY-6483

ceramide degradation by alpha-oxidation

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PWY66-388

chlorogenic acid biosynthesis I

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PWY-6039

chlorophyll a degradation I

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PWY-5098

chlorophyll a degradation II

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PWY-6927

chlorophyll a degradation III

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PWY-7164

chlorophyll metabolism

chlorophyll metabolism

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chlorosalicylate degradation

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PWY-6107

cholesterol biosynthesis

cholesterol biosynthesis

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cholesterol biosynthesis (algae, late side-chain reductase)

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PWY-8191

cholesterol biosynthesis (diatoms)

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PWY-8239

cholesterol biosynthesis (plants, early side-chain reductase)

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PWY18C3-1

cholesterol biosynthesis I

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PWY66-341

cholesterol biosynthesis II (via 24,25-dihydrolanosterol)

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PWY66-3

cholesterol biosynthesis III (via desmosterol)

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PWY66-4

Citrate cycle (TCA cycle)

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citric acid cycle

citric acid cycle

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CMP phosphorylation

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PWY-7205

colanic acid building blocks biosynthesis

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COLANSYN-PWY

coumarins biosynthesis (engineered)

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PWY-7398

crotonyl-CoA/ethylmalonyl-CoA/hydroxybutyryl-CoA cycle (engineered)

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PWY-7854

curcuminoid biosynthesis

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PWY-6432

Cutin, suberine and wax biosynthesis

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cyclic electron flow

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PWY-8270

Cysteine and methionine metabolism

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cysteine metabolism

cysteine metabolism

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cytokinin-O-glucosides biosynthesis

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PWY-2902

cytosolic NADPH production (yeast)

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PWY-7268

D-Amino acid metabolism

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D-galactose degradation I (Leloir pathway)

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PWY-6317

D-galactose detoxification

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PWY-3821

d-mannose degradation

d-mannose degradation

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D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis

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PWY-6366

D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis

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PWY-6365

degradation of aromatic, nitrogen containing compounds

degradation of aromatic, nitrogen containing compounds

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degradation of hexoses

degradation of hexoses

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diacylglycerol and triacylglycerol biosynthesis

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TRIGLSYN-PWY

Dioxin degradation

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dissimilatory sulfate reduction I (to hydrogen sufide))

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DISSULFRED-PWY

Diterpenoid biosynthesis

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docosahexaenoate biosynthesis III (6-desaturase, mammals)

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PWY-7606

Drug metabolism - other enzymes

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dZTP biosynthesis

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PWY-8289

enterobactin biosynthesis

enterobactin biosynthesis

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Entner Doudoroff pathway

Entner Doudoroff pathway

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Entner-Doudoroff pathway I

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PWY-8004

ethanol degradation IV

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PWY66-162

ethanol fermentation

ethanol fermentation

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ethene biosynthesis I (plants)

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ETHYL-PWY

ethene biosynthesis V (engineered)

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PWY-7124

Ether lipid metabolism

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farnesylcysteine salvage pathway

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PWY-6577

fatty acid beta-oxidation II (plant peroxisome)

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PWY-5136

fatty acid beta-oxidation IV (unsaturated, even number)

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PWY-5138

fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)

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PWY-6837

fatty acid beta-oxidation VI (mammalian peroxisome)

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PWY66-391

fatty acid beta-oxidation VII (yeast peroxisome)

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PWY-7288

Fatty acid degradation

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flavin biosynthesis

flavin biosynthesis

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flavin biosynthesis I (bacteria and plants)

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RIBOSYN2-PWY

flavin biosynthesis II (archaea)

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PWY-6167

flavin biosynthesis III (fungi)

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PWY-6168

Flavonoid biosynthesis

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Folate biosynthesis

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folate polyglutamylation

formaldehyde assimilation I (serine pathway)

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PWY-1622

formaldehyde assimilation III (dihydroxyacetone cycle)

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P185-PWY

formaldehyde oxidation

formaldehyde oxidation

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formaldehyde oxidation II (glutathione-dependent)

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PWY-1801

Fructose and mannose metabolism

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fusicoccin A biosynthesis

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PWY-6659

Galactose metabolism

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GDP-mannose biosynthesis

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PWY-5659

geranylgeranyl diphosphate biosynthesis

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PWY-5120

gibberellin biosynthesis III (early C-13 hydroxylation)

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PWY-5035

gibberellin inactivation I (2beta-hydroxylation)

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PWY-102

gluconeogenesis I

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GLUCONEO-PWY

gluconeogenesis III

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PWY66-399

glucosinolate activation

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PWY-5267

Glucosinolate biosynthesis

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glucosinolate biosynthesis from dihomomethionine

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PWYQT-4471

glucosinolate biosynthesis from hexahomomethionine

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PWYQT-4475

glucosinolate biosynthesis from homomethionine

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PWY-1187

glucosinolate biosynthesis from pentahomomethionine

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PWYQT-4474

glucosinolate biosynthesis from phenylalanine

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PWY-2821

glucosinolate biosynthesis from tetrahomomethionine

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PWYQT-4473

glucosinolate biosynthesis from trihomomethionine

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PWYQT-4472

glucosinolate biosynthesis from tryptophan

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PWY-601

glucosinolate biosynthesis from tyrosine

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PWY-7901

Glutathione metabolism

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glycerol degradation to butanol

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PWY-7003

Glycerolipid metabolism

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Glycerophospholipid metabolism

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glycine metabolism

glycine metabolism

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Glycine, serine and threonine metabolism

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glycogen biosynthesis

glycogen biosynthesis

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glycolipid desaturation

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PWY-782

glycolysis

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Glycolysis / Gluconeogenesis

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glycolysis I (from glucose 6-phosphate)

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GLYCOLYSIS

glycolysis II (from fructose 6-phosphate)

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PWY-5484

glycolysis III (from glucose)

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ANAGLYCOLYSIS-PWY

glycolysis IV

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PWY-1042

Glyoxylate and dicarboxylate metabolism

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glyphosate degradation III

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PWY-7807

guanosine deoxyribonucleotides de novo biosynthesis I

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PWY-7226

guanosine deoxyribonucleotides de novo biosynthesis II

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PWY-7222

guanosine nucleotides degradation I

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PWY-6607

guanosine nucleotides degradation II

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PWY-6606

guanosine nucleotides degradation III

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PWY-6608

guanosine ribonucleotides de novo biosynthesis

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PWY-7221

heme b biosynthesis I (aerobic)

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HEME-BIOSYNTHESIS-II

heme b biosynthesis V (aerobic)

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HEME-BIOSYNTHESIS-II-1

heme metabolism

heme metabolism

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heterolactic fermentation

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P122-PWY

homocysteine and cysteine interconversion

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PWY-801

hydrogen sulfide biosynthesis II (mammalian)

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PWY66-426

hydroxylated fatty acid biosynthesis (plants)

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PWY-6433

IAA biosynthesis

IAA biosynthesis

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icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)

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PWY-7602

icosapentaenoate biosynthesis VI (fungi)

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PWY-6940

indole glucosinolate activation (herbivore attack)

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PWYQT-4476

indole glucosinolate activation (intact plant cell)

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PWYQT-4477

indole-3-acetate biosynthesis I

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PWYDQC-4

indole-3-acetate biosynthesis II

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PWY-581

indole-3-acetate biosynthesis III (bacteria)

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PWY-3161

indole-3-acetate biosynthesis IV (bacteria)

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PWY-5025

indole-3-acetate biosynthesis VI (bacteria)

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TRPIAACAT-PWY

indolmycin biosynthesis

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PWY-7770

inosine 5'-phosphate degradation

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PWY-5695

inositol diphosphates biosynthesis

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PWY-6369

Inositol phosphate metabolism

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isoprenoid biosynthesis

isoprenoid biosynthesis

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jasmonic acid biosynthesis

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PWY-735

L-alanine biosynthesis II

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ALANINE-SYN2-PWY

L-alanine degradation II (to D-lactate)

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ALACAT2-PWY

L-alanine degradation III

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ALANINE-DEG3-PWY

L-alanine degradation V (oxidative Stickland reaction)

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PWY-8189

L-alanine degradation VI (reductive Stickland reaction)

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PWY-8188

L-arginine biosynthesis III (via N-acetyl-L-citrulline)

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PWY-5154

L-arginine degradation III (arginine decarboxylase/agmatinase pathway)

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PWY0-823

L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway)

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ARGDEG-III-PWY

L-arginine degradation X (arginine monooxygenase pathway)

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ARGDEG-V-PWY

L-ascorbate biosynthesis I (plants, L-galactose pathway)

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PWY-882

L-ascorbate biosynthesis VI (plants, myo-inositol pathway)

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PWY-8142

L-ascorbate biosynthesis VII (plants, D-galacturonate pathway)

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PWY-8143

L-ascorbate degradation II (bacterial, aerobic)

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PWY-6961

L-ascorbate degradation III

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PWY-6960

L-asparagine biosynthesis I

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ASPARAGINE-BIOSYNTHESIS

L-cysteine biosynthesis III (from L-homocysteine)

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HOMOCYSDEGR-PWY

L-cysteine biosynthesis VI (reverse transsulfuration)

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PWY-I9

L-leucine degradation I

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LEU-DEG2-PWY

L-lysine biosynthesis VI

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PWY-5097

L-methionine degradation III

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PWY-5082

L-nicotianamine biosynthesis

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PWY-5957

L-ornithine biosynthesis I

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GLUTORN-PWY

L-phenylalanine biosynthesis I

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PHESYN

L-phenylalanine biosynthesis II

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PWY-3462

L-phenylalanine degradation II (anaerobic)

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ANAPHENOXI-PWY

L-phenylalanine degradation III

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PWY-5079

L-phenylalanine degradation IV (mammalian, via side chain)

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PWY-6318

L-phenylalanine degradation VI (reductive Stickland reaction)

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PWY-8014

L-serine biosynthesis II

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PWY-8011

L-tryptophan degradation IV (via indole-3-lactate)

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TRPKYNCAT-PWY

L-tryptophan degradation VIII (to tryptophol)

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PWY-5081

L-tryptophan degradation XIII (reductive Stickland reaction)

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PWY-8017

L-tyrosine biosynthesis I

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TYRSYN

L-tyrosine degradation I

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TYRFUMCAT-PWY

L-tyrosine degradation II

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PWY-5151

L-tyrosine degradation III

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PWY3O-4108

L-tyrosine degradation IV (to 4-methylphenol)

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PWY-7514

L-tyrosine degradation V (reductive Stickland reaction)

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PWY-8016

leucine metabolism

leucine metabolism

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Linoleic acid metabolism

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lipid A biosynthesis

lipid A biosynthesis

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lipid IVA biosynthesis (2,3-diamino-2,3-dideoxy-D-glucopyranose-containing)

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PWY2B4Q-4

lipid IVA biosynthesis (E. coli)

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NAGLIPASYN-PWY

lipid IVA biosynthesis (generic)

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PWY-8283

lipid IVA biosynthesis (H. pylori)

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PWYI-14

lipid IVA biosynthesis (P. gingivalis)

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PWY-8245

lipid IVA biosynthesis (P. putida)

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PWY-8073

lipid IVA biosynthesis (Vibrio cholerae serogroup O1 El Tor)

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PWY2G6Z-2

lipid metabolism

lipid metabolism

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lipoate biosynthesis

lipoate biosynthesis

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lipoate biosynthesis and incorporation I

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PWY0-501

lipoate biosynthesis and incorporation III (Bacillus)

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PWY-6987

lipoate biosynthesis and incorporation IV (yeast)

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PWY-7382

lipoate biosynthesis and incorporation V (mammals)

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PWY0-501-1

Lipoic acid metabolism

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Lipopolysaccharide biosynthesis

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long chain fatty acid ester synthesis (engineered)

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PWY-6873

lychnose and isolychnose biosynthesis

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PWY-6524

Lysine biosynthesis

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Lysine degradation

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lysine metabolism

lysine metabolism

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Metabolic pathways

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metabolism of disaccharids

metabolism of disaccharids

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-

Methane metabolism

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methanol oxidation to formaldehyde IV

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PWY-5506

methionine metabolism

methionine metabolism

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methyl indole-3-acetate interconversion

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PWY-6303

methyl ketone biosynthesis (engineered)

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PWY-7007

methyl phomopsenoate biosynthesis

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PWY-7721

methylaspartate cycle

methylglyoxal degradation

methylglyoxal degradation

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methylsalicylate biosynthesis

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PWY18C3-22

methylsalicylate degradation

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PWY-6184

Microbial metabolism in diverse environments

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mixed acid fermentation

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FERMENTATION-PWY

molybdenum cofactor biosynthesis

molybdenum cofactor biosynthesis

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molybdopterin biosynthesis

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-

PWY-6823

Monobactam biosynthesis

-

-

mycolyl-arabinogalactan-peptidoglycan complex biosynthesis

-

-

PWY-6397

NADH repair (eukaryotes)

-

-

PWY-6938

NADPH repair (eukaryotes)

-

-

PWY-8137

Naphthalene degradation

-

-

nitrogen remobilization from senescing leaves

-

-

PWY-6549

non-pathway related

non-pathway related

-

-

nonaprenyl diphosphate biosynthesis II

-

-

PWY-6520

O-Antigen nucleotide sugar biosynthesis

-

-

oleate beta-oxidation (isomerase-dependent, yeast)

-

-

PWY-7291

oleate biosynthesis III (cyanobacteria)

-

-

PWY-7587

ophiobolin F biosynthesis

-

-

PWY-7720

Oxidative phosphorylation

-

-

palmitoyl ethanolamide biosynthesis

-

-

PWY-8055

Pantothenate and CoA biosynthesis

-

-

partial TCA cycle (obligate autotrophs)

-

-

PWY-5913

paspaline biosynthesis

-

-

PWY-7492

pectin degradation I

-

-

PWY-7246

pectin degradation II

-

-

PWY-7248

Pentose and glucuronate interconversions

-

-

Pentose phosphate pathway

-

-

pentose phosphate pathway (non-oxidative branch) II

-

-

PWY-8178

phenol degradation

phenol degradation

-

-

Phenylalanine metabolism

-

-

phenylalanine metabolism

phenylalanine metabolism

-

-

Phenylalanine, tyrosine and tryptophan biosynthesis

-

-

phenylpropanoid biosynthesis

-

-

PWY-361

Phenylpropanoid biosynthesis

-

-

phenylpropanoid biosynthesis

phenylpropanoid biosynthesis

-

-

phenylpropanoids methylation (ice plant)

-

-

PWY-7498

phosphatidate biosynthesis (yeast)

-

-

PWY-7411

phosphatidylcholine biosynthesis I

-

-

PWY3O-450

phosphatidylethanolamine bioynthesis

phosphatidylethanolamine bioynthesis

-

-

phospholipases

-

-

LIPASYN-PWY

phospholipid desaturation

-

-

PWY-762

photorespiration I

-

-

PWY-181

photorespiration II

-

-

PWY-8362

photorespiration III

-

-

PWY-8363

photosynthesis

-

-

photosynthesis light reactions

-

-

PWY-101

phytochelatins biosynthesis

-

-

PWY-6745

plasmalogen biosynthesis I (aerobic)

-

-

PWY-7782

plasmalogen degradation

-

-

PWY-7783

plaunotol biosynthesis

-

-

PWY-6691

polyamine pathway

polyamine pathway

-

-

Polycyclic aromatic hydrocarbon degradation

-

-

polyhydroxydecanoate biosynthesis

-

-

PWY-6657

Porphyrin and chlorophyll metabolism

-

-

ppGpp metabolism

-

-

PPGPPMET-PWY

Propanoate metabolism

-

-

propanoyl-CoA degradation II

-

-

PWY-7574

protective electron sinks in the thylakoid membrane (PSII to PTOX)

-

-

PWY1YI0-7

protein S-nitrosylation and denitrosylation

-

-

PWY-7798

purine deoxyribonucleosides salvage

-

-

PWY-7224

Purine metabolism

-

-

purine metabolism

purine metabolism

-

-

purine nucleobases degradation II (anaerobic)

-

-

PWY-5497

putrescine biosynthesis I

-

-

PWY-40

putrescine biosynthesis II

-

-

PWY-43

pyrimidine deoxyribonucleotide phosphorylation

-

-

PWY-7197

pyrimidine deoxyribonucleotides biosynthesis from CTP

-

-

PWY-7210

pyrimidine deoxyribonucleotides de novo biosynthesis I

-

-

PWY-7184

pyrimidine deoxyribonucleotides de novo biosynthesis II

-

-

PWY-7187

pyrimidine deoxyribonucleotides de novo biosynthesis III

-

-

PWY-6545

pyrimidine deoxyribonucleotides de novo biosynthesis IV

-

-

PWY-7198

Pyrimidine metabolism

-

-

pyrimidine metabolism

pyrimidine metabolism

-

-

pyruvate fermentation to acetate VIII

-

-

PWY-5768

pyruvate fermentation to acetoin III

-

-

PWY3O-440

pyruvate fermentation to ethanol II

-

-

PWY-5486

Pyruvate metabolism

-

-

reactive oxygen species degradation

-

-

DETOX1-PWY-1

reductive TCA cycle I

-

-

P23-PWY

retinol biosynthesis

-

-

PWY-6857

Riboflavin metabolism

-

-

rosmarinic acid biosynthesis I

-

-

PWY-5048

rosmarinic acid biosynthesis II

-

-

PWY-5049

salicylate biosynthesis I

-

-

PWY-6406

salicylate biosynthesis II

-

-

PWY-8321

salicylate degradation I

-

-

PWY-6183

scopoletin biosynthesis

-

-

PWY-6792

selenate reduction

-

-

PWY-6932

Selenocompound metabolism

-

-

serine metabolism

serine metabolism

-

-

serotonin and melatonin biosynthesis

-

-

PWY-6030

serotonin metabolism

serotonin metabolism

-

-

solasodine glycosylation

-

-

PWY18C3-4

sophorosyloxydocosanoate deacetylation

-

-

SOPHOROSYLOXYDOCOSANOATE-DEG-PWY

spermidine biosynthesis III

-

-

PWY-6834

spermine and spermidine degradation I

-

-

PWY-6117

spermine and spermidine degradation III

-

-

PWY-6441

Sphingolipid metabolism

-

-

sphingosine and sphingosine-1-phosphate metabolism

-

-

PWY3DJ-11470

sphingosine metabolism

sphingosine metabolism

-

-

stachyose biosynthesis

-

-

PWY-5337

stachyose degradation

-

-

PWY-6527

Starch and sucrose metabolism

-

-

starch biosynthesis

-

-

PWY-622

starch degradation II

-

-

PWY-6724

stearate biosynthesis I (animals)

-

-

PWY-5972

stearidonate biosynthesis (cyanobacteria)

-

-

PWY-7595

stellariose and mediose biosynthesis

-

-

PWY-6525

stellatic acid biosynthesis

-

-

PWY-7736

Steroid biosynthesis

-

-

sterol biosynthesis (methylotrophs)

-

-

PWY-8026

stigma estolide biosynthesis

-

-

PWY-6453

Stilbenoid, diarylheptanoid and gingerol biosynthesis

-

-

Styrene degradation

-

-

suberin monomers biosynthesis

sucrose biosynthesis I (from photosynthesis)

-

-

SUCSYN-PWY

sucrose biosynthesis II

-

-

PWY-7238

sucrose biosynthesis III

-

-

PWY-7347

sucrose degradation II (sucrose synthase)

-

-

PWY-3801

sulfate activation for sulfonation

-

-

PWY-5340

sulfate reduction

sulfate reduction

-

-

sulfite oxidation III

-

-

PWY-5278

Sulfur metabolism

-

-

superoxide radicals degradation

-

-

DETOX1-PWY

superpathway of glucose and xylose degradation

-

-

PWY-6901

superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)

-

-

PWY0-166

superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis

-

-

PWY-7328

TCA cycle I (prokaryotic)

-

-

TCA

TCA cycle IV (2-oxoglutarate decarboxylase)

-

-

P105-PWY

TCA cycle V (2-oxoglutarate synthase)

-

-

PWY-6969

TCA cycle VI (Helicobacter)

-

-

REDCITCYC

TCA cycle VII (acetate-producers)

-

-

PWY-7254

Terpenoid backbone biosynthesis

-

-

theophylline degradation

-

-

PWY-6999

trehalose biosynthesis I

-

-

TRESYN-PWY

trehalose biosynthesis V

-

-

PWY-2661

triacylglycerol degradation

-

-

LIPAS-PWY

Tropane, piperidine and pyridine alkaloid biosynthesis

-

-

Tryptophan metabolism

-

-

tryptophan metabolism

tryptophan metabolism

-

-

type I lipoteichoic acid biosynthesis (S. aureus)

-

-

PWY-7817

type IV lipoteichoic acid biosynthesis (S. pneumoniae)

-

-

PWY-7818

Tyrosine metabolism

-

-

tyrosine metabolism

tyrosine metabolism

-

-

Ubiquinone and other terpenoid-quinone biosynthesis

-

-

UDP-alpha-D-galactose biosynthesis

-

-

PWY-7344

UDP-alpha-D-glucose biosynthesis

-

-

PWY-7343

UDP-alpha-D-glucuronate biosynthesis (from myo-inositol)

-

-

PWY-4841

UTP and CTP de novo biosynthesis

-

-

PWY-7176

valine metabolism

valine metabolism

-

-

Valine, leucine and isoleucine biosynthesis

-

-

Valine, leucine and isoleucine degradation

-

-

vitamin K metabolism

vitamin K metabolism

-

-

volatile benzenoid biosynthesis I (ester formation)

-

-

PWY-4203

xyloglucan degradation II (exoglucanase)

-

-

PWY-6807

Zeatin biosynthesis

-

-

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Arabidopsis thaliana Col-0

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Please wait a moment until the data is sorted. This message will disappear when the data is sorted.

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

cell suspension culture

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

embryonic syncytium

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

show

female gametophyte

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

show

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

inflorescence stem

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

show

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

show

show

show

root apical meristem

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

show

show

show

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

show

show

show

vascular tissue

show

additional information

show

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Please wait a moment until the data is sorted. This message will disappear when the data is sorted.

show

show

chloroplast envelope

show

chloroplast membrane

show

chloroplast stroma

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

show

show

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

endoplasmic reticulum

show

endoplasmic reticulum membrane

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

hechtian strand

Arabidopsis thaliana Col-0

-

-

-

0

Manually annotated by BRENDA team

show

Arabidopsis thaliana Col-0

-

-

-

0

Manually annotated by BRENDA team

mitochondrial inner membrane

Arabidopsis thaliana Col-0

-

GLDH behaves as an integral protein of the inner membrane facing the intermembrane space

0

Manually annotated by BRENDA team

show

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

show

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

plasma membrane

show

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

-

-

0

Manually annotated by BRENDA team

thylakoid membrane

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

CLH is located in the endoplasmic reticulum and the tonoplast of intact plant cells

-

0

Manually annotated by BRENDA team

trans-Golgi network

Arabidopsis thaliana Col-0

-

-

0

Manually annotated by BRENDA team

Arabidopsis thaliana Col-0

-

BG2 localizes to the central vacuole. The N-terminal region of enzyme BG2 is responsible for the vacuolar targeting. The majority of BG2 localizes to the vacuole

0

Manually annotated by BRENDA team

additional information

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NCBI: Taxonomy, PubMed, Genome

SILVA: 16S/18S rRNA, 23S/28S rRNA

Use of this online version of BRENDA is free under the CC BY 4.0 license. See terms of use for full details.

Release 2023.1 (January 2023)