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Information on Organism Acidaminococcus fermentans

Synonyms:
Acidaminococcus fermentans Rogosa 1969 (Approved Lists 1980) emend. Cook et al. 1994; Acidaminococcus fermentans; ATCC 25085; CCUG 9996; CIP 106432; DSM 20731; strain VR4;
Word Map for Organism Acidaminococcus fermentans
TaxTree of Organism Acidaminococcus fermentans
Condensed Tree View
cellular organisms
Bacteria can be found in Brenda BRENDA pathways(superkingdom)
Terrabacteria group can be found in Brenda (clade)
Firmicutes can be found in Brenda BRENDA pathways(phylum)
Negativicutes can be found in Brenda BRENDA pathways(class)
Acidaminococcales can be found in Brenda (order)
Acidaminococcaceae can be found in Brenda BRENDA pathways(family)
Acidaminococcus can be found in Brenda BRENDA pathways(genus)
Acidaminococcus fermentans can be found in Brenda BRENDA pathways(species)
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PATHWAY
BRENDA Link
KEGG Link
MetaCyc Link
(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)
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PWY-7726
(8E,10E)-dodeca-8,10-dienol biosynthesis
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PWY-7654
(S)-lactate fermentation to propanoate, acetate and hydrogen
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PWY-8086
(S)-propane-1,2-diol degradation
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PWY-7013
1,2-propanediol biosynthesis from lactate (engineered)
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PWY-7541
2-methyl-branched fatty acid beta-oxidation
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PWY-8181
3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
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CHLOROPHYLL-SYN
3-methylbutanol biosynthesis (engineered)
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PWY-6871
3-phenylpropanoate degradation
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P281-PWY
3-phenylpropionate degradation
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4-aminobutanoate degradation V
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PWY-5022
4-hydroxybenzoate biosynthesis I (eukaryotes)
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PWY-5754
ABH and Lewis epitopes biosynthesis from type 1 precursor disaccharide
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PWY-7832
ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide
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PWY-7831
acetaldehyde biosynthesis I
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PWY-6333
acetate fermentation
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acetyl CoA biosynthesis
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acetyl-CoA fermentation to butanoate
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PWY-5676
acetylene degradation (anaerobic)
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P161-PWY
acyl-CoA hydrolysis
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PWY-5148
adenosine ribonucleotides de novo biosynthesis
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PWY-7219
adipate biosynthesis
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PWY-8347
adipate degradation
aerobic respiration I (cytochrome c)
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PWY-3781
aerobic respiration III (alternative oxidase pathway)
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PWY-4302
alanine metabolism
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alpha-Linolenic acid metabolism
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Aminobenzoate degradation
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anaerobic energy metabolism (invertebrates, mitochondrial)
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PWY-7384
anteiso-branched-chain fatty acid biosynthesis
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PWY-8173
arginine metabolism
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benzoate biosynthesis I (CoA-dependent, beta-oxidative)
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PWY-6443
benzoate biosynthesis III (CoA-dependent, non-beta-oxidative)
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PWY-6446
Benzoate degradation
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benzoyl-CoA biosynthesis
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PWY-6458
benzoyl-CoA degradation
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benzoyl-CoA degradation I (aerobic)
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PWY-1361
benzoyl-CoA degradation II (anaerobic)
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CENTBENZCOA-PWY
benzoyl-CoA degradation III (anaerobic)
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P321-PWY
beta-alanine biosynthesis II
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PWY-3941
beta-Alanine metabolism
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Biosynthesis of secondary metabolites
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butanoate fermentation
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Butanoate metabolism
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butanol and isobutanol biosynthesis (engineered)
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PWY-7396
C5-Branched dibasic acid metabolism
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Caprolactam degradation
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Carbon fixation pathways in prokaryotes
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Chloroalkane and chloroalkene degradation
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chlorophyll metabolism
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Citrate cycle (TCA cycle)
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citric acid cycle
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CO2 fixation in Crenarchaeota
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crotonate fermentation (to acetate and cyclohexane carboxylate)
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PWY-7401
Cysteine and methionine metabolism
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docosahexaenoate biosynthesis III (6-desaturase, mammals)
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PWY-7606
Drug metabolism - cytochrome P450
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Entner-Doudoroff pathway II (non-phosphorylative)
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NPGLUCAT-PWY
ethanol degradation I
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ETOH-ACETYLCOA-ANA-PWY
ethanol degradation II
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PWY66-21
ethanol fermentation
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ethanolamine utilization
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PWY0-1477
even iso-branched-chain fatty acid biosynthesis
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PWY-8175
fatty acid beta-oxidation I (generic)
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FAO-PWY
fatty acid beta-oxidation II (plant peroxisome)
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PWY-5136
fatty acid beta-oxidation IV (unsaturated, even number)
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PWY-5138
fatty acid beta-oxidation VI (mammalian peroxisome)
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PWY66-391
Fatty acid degradation
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Fatty acid elongation
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Fe(II) oxidation
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PWY-6692
firefly bioluminescence
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PWY-7913
Galactose metabolism
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gallate degradation III (anaerobic)
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P3-PWY
Geraniol degradation
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gluconeogenesis
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gluconeogenesis II (Methanobacterium thermoautotrophicum)
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PWY-6142
Glucosinolate biosynthesis
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glutamate and glutamine metabolism
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Glycine, serine and threonine metabolism
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Glycolysis / Gluconeogenesis
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Glycosaminoglycan degradation
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Glycosphingolipid biosynthesis - ganglio series
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Glycosphingolipid biosynthesis - lacto and neolacto series
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Glyoxylate and dicarboxylate metabolism
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glyoxylate cycle
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GLYOXYLATE-BYPASS
heterolactic fermentation
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P122-PWY
incomplete reductive TCA cycle
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P42-PWY
isoleucine metabolism
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isopropanol biosynthesis (engineered)
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PWY-6876
jasmonic acid biosynthesis
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PWY-735
ketolysis
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PWY66-368
L-alanine biosynthesis I
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ALANINE-VALINESYN-PWY
L-alanine degradation V (oxidative Stickland reaction)
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PWY-8189
L-glutamate degradation V (via hydroxyglutarate)
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P162-PWY
L-glutamate degradation VI (to pyruvate)
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PWY-5087
L-glutamate degradation VII (to butanoate)
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GLUDEG-II-PWY
L-glutamate degradation XI (reductive Stickland reaction)
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PWY-8190
L-isoleucine biosynthesis I (from threonine)
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ILEUSYN-PWY
L-isoleucine biosynthesis II
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PWY-5101
L-isoleucine biosynthesis III
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PWY-5103
L-isoleucine biosynthesis IV
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PWY-5104
L-isoleucine biosynthesis V
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PWY-5108
L-isoleucine degradation I
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ILEUDEG-PWY
L-isoleucine degradation II
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PWY-5078
L-isoleucine degradation III (oxidative Stickland reaction)
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PWY-8184
L-leucine biosynthesis
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LEUSYN-PWY
L-leucine degradation I
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LEU-DEG2-PWY
L-leucine degradation III
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PWY-5076
L-leucine degradation IV (reductive Stickland reaction)
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PWY-7767
L-leucine degradation V (oxidative Stickland reaction)
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PWY-8185
L-lysine fermentation to acetate and butanoate
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P163-PWY
L-methionine degradation III
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PWY-5082
L-phenylalanine degradation III
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PWY-5079
L-phenylalanine degradation VI (reductive Stickland reaction)
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PWY-8014
L-tryptophan degradation V (side chain pathway)
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PWY-3162
L-tryptophan degradation XIII (reductive Stickland reaction)
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PWY-8017
L-tyrosine degradation III
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PWY3O-4108
L-tyrosine degradation V (reductive Stickland reaction)
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PWY-8016
L-valine biosynthesis
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VALSYN-PWY
L-valine degradation I
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VALDEG-PWY
L-valine degradation II
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PWY-5057
L-valine degradation III (oxidative Stickland reaction)
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PWY-8183
lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales)
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PWY-8377
leucine metabolism
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Limonene and pinene degradation
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lipid metabolism
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Lysine degradation
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malonate degradation II (biotin-dependent)
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PWY-6060
Metabolic pathways
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metabolism of disaccharids
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Metabolism of xenobiotics by cytochrome P450
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Methane metabolism
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methionine metabolism
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methyl ketone biosynthesis (engineered)
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PWY-7007
methylaspartate cycle
methylgallate degradation
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METHYLGALLATE-DEGRADATION-PWY
Microbial metabolism in diverse environments
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mixed acid fermentation
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FERMENTATION-PWY
NAD(P)/NADPH interconversion
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PWY-5083
NADH to cytochrome bd oxidase electron transfer I
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PWY0-1334
NADH to cytochrome bo oxidase electron transfer I
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PWY0-1335
Naphthalene degradation
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nitrate assimilation
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nitrogen fixation I (ferredoxin)
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N2FIX-PWY
nitrogen fixation II (flavodoxin)
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PWY-7576
Nitrogen metabolism
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Nitrotoluene degradation
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noradrenaline and adrenaline degradation
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PWY-6342
odd iso-branched-chain fatty acid biosynthesis
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PWY-8174
oleate beta-oxidation
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PWY0-1337
Other glycan degradation
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Oxidative phosphorylation
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oxidative phosphorylation
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palmitoleate biosynthesis IV (fungi and animals)
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PWY3O-1801
Pantothenate and CoA biosynthesis
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partial TCA cycle (obligate autotrophs)
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PWY-5913
Penicillin and cephalosporin biosynthesis
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phenylacetate degradation (aerobic)
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phenylacetate degradation I (aerobic)
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PWY0-321
Phenylalanine metabolism
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phenylalanine metabolism
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phenylethanol biosynthesis
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PWY-5751
phytol degradation
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PWY66-389
platensimycin biosynthesis
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PWY-8179
Porphyrin and chlorophyll metabolism
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propanoate fermentation to 2-methylbutanoate
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PWY-5109
Propanoate metabolism
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propanol degradation
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propionate fermentation
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protocatechuate degradation I (meta-cleavage pathway)
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P184-PWY
Purine metabolism
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purine metabolism
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purine nucleobases degradation II (anaerobic)
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PWY-5497
pyrimidine deoxyribonucleotides dephosphorylation
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PWY-7206
Pyrimidine metabolism
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pyrimidine metabolism
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pyruvate decarboxylation to acetyl CoA III
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PWY-8275
pyruvate fermentation to acetate I
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P142-PWY
pyruvate fermentation to acetate III
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PWY-5483
pyruvate fermentation to acetate VI
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PWY-5538
pyruvate fermentation to acetate VII
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PWY-5600
pyruvate fermentation to acetone
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PWY-6588
pyruvate fermentation to butanoate
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CENTFERM-PWY
pyruvate fermentation to butanol I
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PWY-6583
pyruvate fermentation to ethanol I
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PWY-5480
pyruvate fermentation to ethanol II
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PWY-5486
pyruvate fermentation to ethanol III
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PWY-6587
pyruvate fermentation to hexanol (engineered)
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PWY-6863
pyruvate fermentation to isobutanol (engineered)
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PWY-7111
pyruvate fermentation to propanoate I
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P108-PWY
pyruvate fermentation to propanoate II (acrylate pathway)
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PWY-5494
Pyruvate metabolism
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reductive glycine pathway of autotrophic CO2 fixation
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PWY-8303
reductive monocarboxylic acid cycle
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PWY-5493
reductive TCA cycle I
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P23-PWY
reductive TCA cycle II
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PWY-5392
Retinol metabolism
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salidroside biosynthesis
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PWY-6802
serotonin degradation
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PWY-6313
serotonin metabolism
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Sphingolipid metabolism
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Spodoptera littoralis pheromone biosynthesis
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PWY-7656
Styrene degradation
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succinate fermentation to butanoate
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PWY-5677
superpathway of Clostridium acetobutylicum solventogenic fermentation
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PWY-6594
superpathway of fermentation (Chlamydomonas reinhardtii)
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PWY4LZ-257
superpathway of glyoxylate cycle and fatty acid degradation
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PWY-561
syringate degradation
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PWY-6339
TCA cycle I (prokaryotic)
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TCA
TCA cycle II (plants and fungi)
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PWY-5690
TCA cycle III (animals)
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PWY66-398
TCA cycle IV (2-oxoglutarate decarboxylase)
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P105-PWY
TCA cycle V (2-oxoglutarate synthase)
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PWY-6969
TCA cycle VI (Helicobacter)
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REDCITCYC
TCA cycle VII (acetate-producers)
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PWY-7254
TCA cycle VIII (Chlamydia)
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TCA-1
Thiamine metabolism
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Tropane, piperidine and pyridine alkaloid biosynthesis
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Tryptophan metabolism
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tryptophan metabolism
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Tyrosine metabolism
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tyrosine metabolism
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Ubiquinone and other terpenoid-quinone biosynthesis
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valine metabolism
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Valine, leucine and isoleucine biosynthesis
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Valine, leucine and isoleucine degradation
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valproate beta-oxidation
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PWY-8182
vitamin K-epoxide cycle
xyloglucan degradation II (exoglucanase)
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PWY-6807
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ORGANISM
COMMENTARY hide
LITERATURE
UNIPROT
SEQUENCE DB
SOURCE
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LOCALIZATION
ORGANISM
UNIPROT
COMMENTARY hide
GeneOntology No.
LITERATURE
SOURCE
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LINKS TO OTHER DATABASES (specific for Acidaminococcus fermentans)
NCBI: Taxonomy, PubMed, Genome
SILVA: 16S/18S rRNA, 23S/28S rRNA