Leibniz Institute DSMZ
DSMZ Digital Diversity
Login
Enzyme, Ligand
contains
Search enzyme or ligand
Go
Classic view
All enzymes
Enzyme history
BRENDA support
Any feedback?
Please rate this page
(localpred.php)
๐
๐
๐ก
(
0
/150)
Send feedback
BRENDA support
Localization Prediction for Eukaryotes -
TargetP
1st Accession Code:
(UniProt)
exact
contains
begins with
ends with
use * as joker
Localization:
Chloroplast
Mitochondrion
Secretory Pathway
other Location
Chloroplast:
sequence contains a chloroplast transit peptide
Mitochondrion:
sequence contains a mitochondrial targeting peptide
Secretory pathway:
sequence contains a signal peptide
other Location:
none of the N-terminal presequences could be found
If the prediction results in
other Location
, please click on the link
Check for transm. helices
in the result table. Otherwise the protein could be cytoplasmic, nuclear or peroxisomal. Our current prediction cannot distinguish between these three localizations. Please consult a specific prediction server for nuclear, cytoplasmic or peroxisomal localization.
Reliability Class:
(1 is best)
1
2
3
4
5
The reliability class ranges from 1 (very reliable) to 5 (not reliable). It is a measure of the size of the difference between the highest and the second highest output scores.
For further details please refer to the following Open Access article about the used localization prediction software - TargetP:
Predicting subcellular localization of proteins based on their N-terminal amino acid sequence.
Olof Emanuelsson, Henrik Nielsen, Sรธren Brunak and Gunnar von Heijne.
J. Mol. Biol.
, 300: 1005-1016, 2000.
EC Number:
contains
exact
begins with
ends with
use * as joker
Recommended name:
(of enzyme)
contains
exact
begins with
ends with
use * as joker
Organism:
contains
exact
begins with
ends with
use * as joker
Number of amino acids:
=
>
<
between
Source:
Swiss-Prot
TrEMBL
No. of results:
10
20
50
100
Distribution of hits in the Enzyme Classification (EC) System
Results
1
-
1
of
1
(Mitochondrion:
0
, Chloroplast:
0
, Secretory Pathway:
0
, other Location:
1
)
EC Number
Recommended Name
Organism
UNIPROT
Localization
Reliability Class
No of amino acids
Source
Links
1.1.1.29
glycerate dehydrogenase
Cucumis sativus
P13443
other Location
3
382 amino acids
Swiss-Prot
Check for transm. helices