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Literature summary extracted from
- Chemical differentiation of three DMSP lyases from the marine Roseobacter group (2017), Org. Biomol. Chem., 15, 4432-4439 .
KM Value [mM]
| EC Number | KM Value [mM] | KM Value Maximum [mM] | Substrate | Comment | Organism | Structure |
|---|---|---|---|---|---|---|
| 4.4.1.3 | 4.2 | - |
dimethylseleniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi |  |
| 4.4.1.3 | 5.7 | - |
3-(thiolan-1-ium-1-yl)propanoate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 8 | - |
methylpropylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 8.2 | - |
diethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 10.7 | - |
ethylmethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 12.8 | - |
dimethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 16.4 | - |
diethylsulfoniopropionate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 18.7 | - |
dimethylseleniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 21.4 | - |
dimethylseleniopropionate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 26.1 | - |
ethylmethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 27.8 | - |
methylpropylsulfoniopropionate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 28.6 | - |
dimethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 31.4 | - |
diethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 31.4 | - |
3-(thiolan-1-ium-1-yl)propanoate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 33.4 | - |
ethylmethylsulfoniopropionate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 34.8 | - |
dimethylsulfoniopropionate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 35.7 | - |
methylpropylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 102.6 | - |
3-(thiolan-1-ium-1-yl)propanoate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
Organism
| EC Number | Organism | UniProt | Comment | Textmining |
|---|---|---|---|---|
| 4.4.1.3 | Phaeobacter inhibens | - |
- |
- |
| 4.4.1.3 | Phaeobacter inhibens DSM 17395 | - |
- |
- |
| 4.4.1.3 | Ruegeria pomeroyi | Q5LT18 | - |
- |
| 4.4.1.3 | Ruegeria pomeroyi | Q5LW89 | - |
- |
| 4.4.1.3 | Ruegeria pomeroyi DSM 15171 | Q5LT18 | - |
- |
| 4.4.1.3 | Ruegeria pomeroyi DSM 15171 | Q5LW89 | - |
- |
Substrates and Products (Substrate)
| EC Number | Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|---|
| 4.4.1.3 | 3-(thiolan-1-ium-1-yl)propanoate | - |
Phaeobacter inhibens | thiolane + acrylate | - |
? | |
| 4.4.1.3 | 3-(thiolan-1-ium-1-yl)propanoate | - |
Ruegeria pomeroyi | thiolane + acrylate | - |
? | |
| 4.4.1.3 | 3-(thiolan-1-ium-1-yl)propanoate | - |
Ruegeria pomeroyi DSM 15171 | thiolane + acrylate | - |
? | |
| 4.4.1.3 | 3-(thiolan-1-ium-1-yl)propanoate | - |
Phaeobacter inhibens DSM 17395 | thiolane + acrylate | - |
? | |
| 4.4.1.3 | diethylsulfoniopropionate | - |
Phaeobacter inhibens | diethylsulfide + acrylate | - |
? | |
| 4.4.1.3 | diethylsulfoniopropionate | - |
Ruegeria pomeroyi | diethylsulfide + acrylate | - |
? | |
| 4.4.1.3 | diethylsulfoniopropionate | - |
Ruegeria pomeroyi DSM 15171 | diethylsulfide + acrylate | - |
? | |
| 4.4.1.3 | diethylsulfoniopropionate | - |
Phaeobacter inhibens DSM 17395 | diethylsulfide + acrylate | - |
? | |
| 4.4.1.3 | dimethylseleniopropionate | - |
Phaeobacter inhibens | dimethylselenide + acrylate | - |
? | |
| 4.4.1.3 | dimethylseleniopropionate | - |
Ruegeria pomeroyi | dimethylselenide + acrylate | - |
? | |
| 4.4.1.3 | dimethylseleniopropionate | - |
Ruegeria pomeroyi DSM 15171 | dimethylselenide + acrylate | - |
? | |
| 4.4.1.3 | dimethylseleniopropionate | - |
Phaeobacter inhibens DSM 17395 | dimethylselenide + acrylate | - |
? | |
| 4.4.1.3 | dimethylsulfoniopropionate | - |
Phaeobacter inhibens | dimethylsulfide + acrylate | - |
? | |
| 4.4.1.3 | dimethylsulfoniopropionate | - |
Ruegeria pomeroyi | dimethylsulfide + acrylate | - |
? | |
| 4.4.1.3 | dimethylsulfoniopropionate | - |
Ruegeria pomeroyi DSM 15171 | dimethylsulfide + acrylate | - |
? | |
| 4.4.1.3 | dimethylsulfoniopropionate | - |
Phaeobacter inhibens DSM 17395 | dimethylsulfide + acrylate | - |
? | |
| 4.4.1.3 | ethylmethylsulfoniopropionate | - |
Phaeobacter inhibens | ethylmethylsulfide + acrylate | - |
? | |
| 4.4.1.3 | ethylmethylsulfoniopropionate | - |
Ruegeria pomeroyi | ethylmethylsulfide + acrylate | - |
? | |
| 4.4.1.3 | ethylmethylsulfoniopropionate | - |
Ruegeria pomeroyi DSM 15171 | ethylmethylsulfide + acrylate | - |
? | |
| 4.4.1.3 | ethylmethylsulfoniopropionate | - |
Phaeobacter inhibens DSM 17395 | ethylmethylsulfide + acrylate | - |
? | |
| 4.4.1.3 | methylpropylsulfoniopropionate | - |
Phaeobacter inhibens | methylpropylsulfide + acrylate | - |
? | |
| 4.4.1.3 | methylpropylsulfoniopropionate | - |
Ruegeria pomeroyi | methylpropylsulfide + acrylate | - |
? | |
Synonyms
| EC Number | Synonyms | Comment | Organism |
|---|---|---|---|
| 4.4.1.3 | dddP | - |
Phaeobacter inhibens |
| 4.4.1.3 | DddQ | - |
Ruegeria pomeroyi |
| 4.4.1.3 | DddW | - |
Ruegeria pomeroyi |
Turnover Number [1/s]
| EC Number | Turnover Number Minimum [1/s] | Turnover Number Maximum [1/s] | Substrate | Comment | Organism | Structure |
|---|---|---|---|---|---|---|
| 4.4.1.3 | 0.93 | - |
dimethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 1.47 | - |
ethylmethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 1.58 | - |
3-(thiolan-1-ium-1-yl)propanoate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 1.67 | - |
methylpropylsulfoniopropionate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 1.71 | - |
diethylsulfoniopropionate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 1.83 | - |
dimethylseleniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 2.04 | - |
3-(thiolan-1-ium-1-yl)propanoate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 2.07 | - |
ethylmethylsulfoniopropionate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 2.22 | - |
diethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 3.73 | - |
methylpropylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 3.85 | - |
dimethylsulfoniopropionate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 4.25 | - |
dimethylseleniopropionate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 10.9 | - |
methylpropylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 11.5 | - |
ethylmethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 11.9 | - |
diethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 16.8 | - |
dimethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 21.9 | - |
3-(thiolan-1-ium-1-yl)propanoate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 31.2 | - |
dimethylseleniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
kcat/KM [mM/s]
| EC Number | kcat/KM Value [1/mMs-1] | kcat/KM Value Maximum [1/mMs-1] | Substrate | Comment | Organism | Structure |
|---|---|---|---|---|---|---|
| 4.4.1.3 | 0.02 | - |
3-(thiolan-1-ium-1-yl)propanoate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 0.032 | - |
dimethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 0.05 | - |
3-(thiolan-1-ium-1-yl)propanoate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 0.056 | - |
ethylmethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 0.06 | - |
methylpropylsulfoniopropionate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 0.062 | - |
ethylmethylsulfoniopropionate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 0.071 | - |
diethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 0.098 | - |
dimethylseleniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 0.104 | - |
diethylsulfoniopropionate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 0.105 | - |
methylpropylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 0.111 | - |
dimethylsulfoniopropionate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 0.199 | - |
dimethylseleniopropionate | 30°C, pH not specified in the publication | Phaeobacter inhibens | |
| 4.4.1.3 | 1.08 | - |
ethylmethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 1.32 | - |
dimethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 1.35 | - |
methylpropylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 1.46 | - |
diethylsulfoniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 3.82 | - |
3-(thiolan-1-ium-1-yl)propanoate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
| 4.4.1.3 | 7.38 | - |
dimethylseleniopropionate | 30°C, pH not specified in the publication | Ruegeria pomeroyi | |
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