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Literature summary extracted from

  • Ruehl, P.; Poell, U.; Braun, J.; Klingl, A.; Kletzin, A.
    A sulfur oxygenase from the haloalkaliphilic bacterium Thioalkalivibrio paradoxus with atypically low reductase Activity (2017), J. Bacteriol., 199, e00675 .
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

EC Number Cloned (Comment) Organism
1.13.11.55 gene AaSOR, phylogenetic analysis, recombinant expression of wild-type and mutant enzymes in Escherichia coli Aquifex aeolicus
1.13.11.55 phylogenetic analysis, synthetic gene encoding TpSOR, recombinant expression of wild-type and mutant enzymes in Escherichia coli Thioalkalivibrio paradoxus

Protein Variants

EC Number Protein Variants Comment Organism
1.13.11.55 C113A site-directed mutagenesis, almost inactive mutant Thioalkalivibrio paradoxus
1.13.11.55 C116A site-directed mutagenesis, almost inactive mutant Thioalkalivibrio paradoxus
1.13.11.55 C31A site-directed mutagenesis, inactive mutant Aquifex aeolicus
1.13.11.55 C44A site-directed mutagenesis, inactive mutant Thioalkalivibrio paradoxus

Inhibitors

EC Number Inhibitors Comment Organism Structure
1.13.11.55 glycine betaine 25% inhibition at 1 M NaCl, below 10% activity at 3 M, inactive at 4 M NaCl Thioalkalivibrio paradoxus
1.13.11.55 NaCl about 80% inhibition at 2 M NaCl, almost inactive at 3 M NaCl Aquifex aeolicus
1.13.11.55 NaCl 25% inhibition at 1 M NaCl, below 10% activity at 3 M, residual activities of 0.2% of the maximum at 5 M NaCl Thioalkalivibrio paradoxus

Metals/Ions

EC Number Metals/Ions Comment Organism Structure
1.13.11.55 Fe2+ low-potential mononuclear non-heme iron bound in the active site Thioalkalivibrio paradoxus
1.13.11.55 additional information TpSOR activity depends on osmolyte concentrations and not on salt Thioalkalivibrio paradoxus

Molecular Weight [Da]

EC Number Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
1.13.11.55 556000
-
gel filtration, recombinant enzyme Thioalkalivibrio paradoxus
1.13.11.55 602000
-
gel filtration, recombinant enzyme Aquifex aeolicus

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
1.13.11.55 4 sulfur + 4 H2O + O2 Aquifex aeolicus
-
2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?
1.13.11.55 4 sulfur + 4 H2O + O2 Thioalkalivibrio paradoxus
-
2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?
1.13.11.55 4 sulfur + 4 H2O + O2 Thioalkalivibrio paradoxus Arh 1
-
2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?

Organism

EC Number Organism UniProt Comment Textmining
1.13.11.55 Aquifex aeolicus
-
-
-
1.13.11.55 Thioalkalivibrio paradoxus
-
-
-
1.13.11.55 Thioalkalivibrio paradoxus Arh 1
-
-
-

Purification (Commentary)

EC Number Purification (Comment) Organism
1.13.11.55 recombinant wild-type and mutant enzymes from Escherichia coli Aquifex aeolicus
1.13.11.55 recombinant wild-type and mutant enzymes from Escherichia coli Thioalkalivibrio paradoxus

Source Tissue

EC Number Source Tissue Comment Organism Textmining
1.13.11.55 additional information highest activity of cells at 35-37°C and pH 10.0 Thioalkalivibrio paradoxus
-
1.13.11.55 additional information highest activity of cells at 85°C and pH 6.8 Aquifex aeolicus
-

Specific Activity [micromol/min/mg]

EC Number Specific Activity Minimum [µmol/min/mg] Specific Activity Maximum [µmol/min/mg] Comment Organism
1.13.11.55 additional information
-
recombinant Thioalkalivibrio paradoxus SOR has a very low reductase activity and H2S production Thioalkalivibrio paradoxus
1.13.11.55 0.03
-
purified recombinant enzyme, pH 9.0, 80°C, reductase activity Thioalkalivibrio paradoxus
1.13.11.55 308 454 purified recombinant enzyme, pH 9.0, 80°C, thiosulfate- and sulfite-producing oxygenase activity Thioalkalivibrio paradoxus

Storage Stability

EC Number Storage Stability Organism
1.13.11.55 4°C, purified recombinant enzyme, up to 2 weeks without significant loss of activity, inactivation of the enzyme after 12 weeks, the inactive enzyme shows complete unfolding of the protein Thioalkalivibrio paradoxus

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
1.13.11.55 4 sulfur + 4 H2O + O2
-
Aquifex aeolicus 2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?
1.13.11.55 4 sulfur + 4 H2O + O2
-
Thioalkalivibrio paradoxus 2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?
1.13.11.55 4 sulfur + 4 H2O + O2 discoloration of 2,6-dichlorophenolindophenol (DCPIP) by H2S is followed as an alternative detection method Aquifex aeolicus 2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?
1.13.11.55 4 sulfur + 4 H2O + O2 discoloration of 2,6-dichlorophenolindophenol (DCPIP) by H2S is followed as an alternative detection method Thioalkalivibrio paradoxus 2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?
1.13.11.55 4 sulfur + 4 H2O + O2
-
Thioalkalivibrio paradoxus Arh 1 2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?
1.13.11.55 4 sulfur + 4 H2O + O2 discoloration of 2,6-dichlorophenolindophenol (DCPIP) by H2S is followed as an alternative detection method Thioalkalivibrio paradoxus Arh 1 2 hydrogen sulfide + 2 HSO3- + 2 H+
-
?
1.13.11.55 additional information at 50°C, nonenzymatic sulfur disproportionation is observed at pH 11 and above. At pH 12, the enzyme activity cannot be distinguished from the background anymore. At 50°C, sulfite exceeds thiosulfate production at all pH value, at 80°C, the main product is thiosulfate with only minor amounts of sulfite (maximum 6%) Thioalkalivibrio paradoxus ?
-
?
1.13.11.55 additional information at 50°C, nonenzymatic sulfur disproportionation is observed at pH 11 and above. At pH 12, the enzyme activity cannot be distinguished from the background anymore. At 50°C, sulfite exceeds thiosulfate production at all pH value, at 80°C, the main product is thiosulfate with only minor amounts of sulfite (maximum 6%) Thioalkalivibrio paradoxus Arh 1 ?
-
?

Subunits

EC Number Subunits Comment Organism
1.13.11.55 More All SORs seem to form highly thermostable 24-subunit hollow spheres Thioalkalivibrio paradoxus
1.13.11.55 tetraicosamer 24 * 35287, sequence calculation Thioalkalivibrio paradoxus
1.13.11.55 tetraicosamer 24 * 37674, sequence calculation Aquifex aeolicus

Synonyms

EC Number Synonyms Comment Organism
1.13.11.55 AaSOR
-
Aquifex aeolicus
1.13.11.55 SOR
-
Aquifex aeolicus
1.13.11.55 SOR
-
Thioalkalivibrio paradoxus
1.13.11.55 sulfur oxygenase
-
Aquifex aeolicus
1.13.11.55 sulfur oxygenase
-
Thioalkalivibrio paradoxus
1.13.11.55 sulfur oxygenase reductase
-
Aquifex aeolicus
1.13.11.55 sulfur oxygenase reductase
-
Thioalkalivibrio paradoxus
1.13.11.55 TpSOR
-
Thioalkalivibrio paradoxus

Temperature Optimum [°C]

EC Number Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
1.13.11.55 80
-
recombinant enzyme Thioalkalivibrio paradoxus
1.13.11.55 85
-
recombinant enzyme Aquifex aeolicus

Temperature Range [°C]

EC Number Temperature Minimum [°C] Temperature Maximum [°C] Comment Organism
1.13.11.55 40 95 activity range, profile overview. 13.4% of maximal activity at 40°C, maximal activity at 80°C, at pH 9.0 Thioalkalivibrio paradoxus

Temperature Stability [°C]

EC Number Temperature Stability Minimum [°C] Temperature Stability Maximum [°C] Comment Organism
1.13.11.55 80
-
purified recombinant enzyme, a total of 55% of the TpSOR activity is lost after 25 min, and 99% is lost after 60 min Thioalkalivibrio paradoxus
1.13.11.55 85
-
purified recombinant enzyme, 45% residual activity after 1 h Aquifex aeolicus

pH Optimum

EC Number pH Optimum Minimum pH Optimum Maximum Comment Organism
1.13.11.55 7.2
-
assay at Aquifex aeolicus
1.13.11.55 9
-
recombinant enzyme Thioalkalivibrio paradoxus

pH Range

EC Number pH Minimum pH Maximum Comment Organism
1.13.11.55 5.5 8 activity range, profile overview, at 50°C Aquifex aeolicus
1.13.11.55 6.5 11.5 activity range, proflie overview, at 50°C Thioalkalivibrio paradoxus

General Information

EC Number General Information Comment Organism
1.13.11.55 physiological function the enzyme is involved in the dissimilatory oxidation of sulfur compounds, schematic overview. Sulfur oxygenase reductases (SORs) catalyze a dioxygen-dependent disproportionation reaction of elemental sulfur (S0, consisting mostly of cyclo-octasulfur) with sulfite, thiosulfate, and sulfide as detectable products Aquifex aeolicus
1.13.11.55 physiological function the enzyme is involved in the dissimilatory oxidation of sulfur compounds, schematic overview. Sulfur oxygenase reductases (SORs) catalyze a dioxygen-dependent disproportionation reaction of elemental sulfur (S0, consisting mostly of cyclo-octasulfur) with sulfite, thiosulfate, and sulfide as detectable products. Recombinant Thioalkalivibrio paradoxus SOR has a very low reductase activity and H2S production Thioalkalivibrio paradoxus