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Literature summary extracted from

  • Eckert, C.; Xu, W.; Xiong, W.; Lynch, S.; Ungerer, J.; Tao, L.; Gill, R.; Maness, P.; Yu, J.
    Ethylene-forming enzyme and bioethylene production (2014), Biotechnol. Biofuels, 7, 33 .
    View publication on PubMedView publication on EuropePMC

Application

EC Number Application Comment Organism
1.13.12.19 biotechnology EFE is a promising biotechnology target because the expression of a single gene is sufficient for ethylene production in the absence of toxic intermediates Pseudomonas savastanoi pv. phaseolicola
1.13.12.19 biotechnology EFE is a promising biotechnology target because the expression of a single gene is sufficient for ethylene production in the absence of toxic intermediates Pseudomonas savastanoi pv. glycinea

Cloned(Commentary)

EC Number Cloned (Comment) Organism
1.13.12.19 gene efe, DNA and amino acid sequence determination and analysis, sequence comparisons and phylogenetic analysis and tree Penicillium digitatum
1.13.12.19 gene efe, DNA and amino acid sequence determination and analysis, sequence comparisons and phylogenetic analysis and tree Pseudomonas savastanoi pv. glycinea
1.13.12.19 gene efe, DNA and amino acid sequence determination and analysis, sequence comparisons and phylogenetic analysis and tree Ralstonia solanacearum
1.13.12.19 gene efe, DNA and amino acid sequence determination and analysis, sequence comparisons and phylogenetic analysis and tree, heterologous expression of the single efe gene from Pseudomonas syringae results in ethylene production in a number of hosts including Escherichia coli, Saccharomyces cerevisiae, Pseudomonas putida, Trichoderma viride, Trichoderma reesei, tobacco, and cyanobacteria. Methods overview Pseudomonas savastanoi pv. phaseolicola
1.14.20.7 expressed in Escherichia coli BL21(DE3) cells Pseudomonas syringae

Metals/Ions

EC Number Metals/Ions Comment Organism Structure
1.13.12.19 Fe2+ dependent on, required for catalysis Penicillium digitatum
1.13.12.19 Fe2+ dependent on, required for catalysis Pseudomonas savastanoi pv. phaseolicola
1.13.12.19 Fe2+ dependent on, required for catalysis Pseudomonas savastanoi pv. glycinea
1.13.12.19 Fe2+ dependent on, required for catalysis Ralstonia solanacearum

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
1.13.12.19 3 2-oxoglutarate + L-arginine + 3 O2 Penicillium digitatum cf. EC 1.14.11.34 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
1.13.12.19 3 2-oxoglutarate + L-arginine + 3 O2 Pseudomonas savastanoi pv. phaseolicola cf. EC 1.14.11.34 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
1.13.12.19 3 2-oxoglutarate + L-arginine + 3 O2 Pseudomonas savastanoi pv. glycinea cf. EC 1.14.11.34 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
1.13.12.19 3 2-oxoglutarate + L-arginine + 3 O2 Ralstonia solanacearum cf. EC 1.14.11.34 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
1.13.12.19 3 2-oxoglutarate + L-arginine + 3 O2 Pseudomonas savastanoi pv. phaseolicola PK2 cf. EC 1.14.11.34 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
1.14.20.7 2-oxoglutarate + L-arginine + O2 Pseudomonas syringae
-
 ethylene + succinate + CO2 + guanidine + (S)-1-pyrroline-5-carboxylate + H2O
-
 ?
1.14.20.7 2-oxoglutarate + L-arginine + O2 Pseudomonas syringae Kudzu
-
 ethylene + succinate + CO2 + guanidine + (S)-1-pyrroline-5-carboxylate + H2O
-
 ?

Organism

EC Number Organism UniProt Comment Textmining
1.13.12.19 Penicillium digitatum
-
-
-
1.13.12.19 Pseudomonas savastanoi pv. glycinea Q7BS32
-
-
1.13.12.19 Pseudomonas savastanoi pv. phaseolicola P32021 i.e. Kudzu strain
-
1.13.12.19 Pseudomonas savastanoi pv. phaseolicola PK2 P32021 i.e. Kudzu strain
-
1.13.12.19 Ralstonia solanacearum Q8XPV7
-
-
1.14.20.7 Pseudomonas syringae
-
-
-
1.14.20.7 Pseudomonas syringae Kudzu
-
-
-

Reaction

EC Number Reaction Comment Organism Reaction ID
1.13.12.19 2-oxoglutarate + O2 = ethene + 3 CO2 + H2O reaction mechanism, overview Penicillium digitatum
a
1.13.12.19 2-oxoglutarate + O2 = ethene + 3 CO2 + H2O reaction mechanism, overview Pseudomonas savastanoi pv. phaseolicola
a
1.13.12.19 2-oxoglutarate + O2 = ethene + 3 CO2 + H2O reaction mechanism, overview Pseudomonas savastanoi pv. glycinea
a
1.13.12.19 2-oxoglutarate + O2 = ethene + 3 CO2 + H2O reaction mechanism, overview Ralstonia solanacearum
a

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
1.13.12.19 3 2-oxoglutarate + L-arginine + 3 O2 cf. EC 1.14.11.34 Penicillium digitatum 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
1.13.12.19 3 2-oxoglutarate + L-arginine + 3 O2 cf. EC 1.14.11.34 Pseudomonas savastanoi pv. phaseolicola 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
1.13.12.19 3 2-oxoglutarate + L-arginine + 3 O2 cf. EC 1.14.11.34 Pseudomonas savastanoi pv. glycinea 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
1.13.12.19 3 2-oxoglutarate + L-arginine + 3 O2 cf. EC 1.14.11.34 Ralstonia solanacearum 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
1.13.12.19 3 2-oxoglutarate + L-arginine + 3 O2 cf. EC 1.14.11.34 Pseudomonas savastanoi pv. phaseolicola PK2 2 C2H4 + succinate + 7 CO2 + 3 H2O + guanidine + L-DELTA1-pyrroline-5-carboxylate
-
 ?
1.14.20.7 2-oxoglutarate + L-arginine + O2
-
 Pseudomonas syringae ethylene + succinate + CO2 + guanidine + (S)-1-pyrroline-5-carboxylate + H2O
-
 ?
1.14.20.7 2-oxoglutarate + L-arginine + O2
-
 Pseudomonas syringae Kudzu ethylene + succinate + CO2 + guanidine + (S)-1-pyrroline-5-carboxylate + H2O
-
 ?

Synonyms

EC Number Synonyms Comment Organism
1.13.12.19 2-oxoglutarate-Fe(II) oxygenase
-
 Penicillium digitatum
1.13.12.19 2-oxoglutarate-Fe(II) oxygenase
-
 Pseudomonas savastanoi pv. phaseolicola
1.13.12.19 2-oxoglutarate-Fe(II) oxygenase
-
 Pseudomonas savastanoi pv. glycinea
1.13.12.19 2-oxoglutarate-Fe(II) oxygenase
-
 Ralstonia solanacearum
1.13.12.19 2OG-Fe(II) oxygenase
-
 Penicillium digitatum
1.13.12.19 2OG-Fe(II) oxygenase
-
 Pseudomonas savastanoi pv. phaseolicola
1.13.12.19 2OG-Fe(II) oxygenase
-
 Pseudomonas savastanoi pv. glycinea
1.13.12.19 2OG-Fe(II) oxygenase
-
 Ralstonia solanacearum
1.13.12.19 EFE
-
 Penicillium digitatum
1.13.12.19 EFE
-
 Pseudomonas savastanoi pv. phaseolicola
1.13.12.19 EFE
-
 Pseudomonas savastanoi pv. glycinea
1.13.12.19 ethylene-forming enzyme
-
 Penicillium digitatum
1.13.12.19 ethylene-forming enzyme
-
 Pseudomonas savastanoi pv. phaseolicola
1.13.12.19 ethylene-forming enzyme
-
 Pseudomonas savastanoi pv. glycinea
1.13.12.19 ethylene-forming enzyme
-
 Ralstonia solanacearum
1.13.12.19 More cf. EC 1.14.11.34 Penicillium digitatum
1.13.12.19 More cf. EC 1.14.11.34 Pseudomonas savastanoi pv. phaseolicola
1.13.12.19 More cf. EC 1.14.11.34 Pseudomonas savastanoi pv. glycinea
1.13.12.19 More cf. EC 1.14.11.34 Ralstonia solanacearum
1.14.20.7 EFE
-
 Pseudomonas syringae
1.14.20.7 ethylene-forming enzyme
-
 Pseudomonas syringae

General Information

EC Number General Information Comment Organism
1.13.12.19 metabolism analysis enzyme EFE reaction and cellular carbon flux, overview Penicillium digitatum
1.13.12.19 metabolism analysis enzyme EFE reaction and cellular carbon flux, overview Pseudomonas savastanoi pv. phaseolicola
1.13.12.19 metabolism analysis enzyme EFE reaction and cellular carbon flux, overview Pseudomonas savastanoi pv. glycinea
1.13.12.19 metabolism analysis enzyme EFE reaction and cellular carbon flux, overview Ralstonia solanacearum