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Literature summary extracted from
- Molecular genetic analysis of a dimethylsulfoniopropionate lyase that liberates the climate-changing gas dimethylsulfide in several marine alpha -proteobacteria and Rhodobacter sphaeroides (2008), Environ. Microbiol., 10, 1099.
Cloned(Commentary)
| EC Number | Cloned (Comment) | Organism |
|---|---|---|
| 4.4.1.3 | gene dddL, expression analysis | Fulvimarina pelagi HTCC2506 |
| 4.4.1.3 | gene dddL, expression analysis | Yoonia vestfoldensis |
| 4.4.1.3 | gene dddL, expression analysis | Pseudooceanicola batsensis HTCC2597 |
| 4.4.1.3 | gene dddL, expression analysis | Stappia sp. |
| 4.4.1.3 | gene dddl, expression analysis, expression in Escherichia coli | Cereibacter sphaeroides |
| 4.4.1.3 | gene dddL, genetic organization and expression analysis, expression in Escherichia coli | Sulfitobacter sp. EE-36 |
Natural Substrates/ Products (Substrates)
| EC Number | Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
|---|---|---|---|---|---|---|---|
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | Sulfitobacter sp. EE-36 | the alpha-proteobacterium produces the gas dimethylsulfide from dimethylsulfoniopropionate, an abundant antistress molecule made by many marine phytoplankton | dimethyl sulfide + acrylate | - |
? |  |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | Fulvimarina pelagi HTCC2506 | the alpha-proteobacterium produces the gas dimethylsulfide from dimethylsulfoniopropionate, an abundant antistress molecule made by many marine phytoplankton | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | Yoonia vestfoldensis | the alpha-proteobacterium produces the gas dimethylsulfide from dimethylsulfoniopropionate, an abundant antistress molecule made by many marine phytoplankton | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | Pseudooceanicola batsensis HTCC2597 | the alpha-proteobacterium produces the gas dimethylsulfide from dimethylsulfoniopropionate, an abundant antistress molecule made by many marine phytoplankton | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | Stappia sp. | the alpha-proteobacterium produces the gas dimethylsulfide from dimethylsulfoniopropionate, an abundant antistress molecule made by many marine phytoplankton | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | Cereibacter sphaeroides | the alpha-proteobacterium Sulfitobacter EE-36 produces the gas dimethylsulfide from dimethylsulfoniopropionate, an abundant antistress molecule made by many marine phytoplankton | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | Stappia sp. KB902 | the alpha-proteobacterium produces the gas dimethylsulfide from dimethylsulfoniopropionate, an abundant antistress molecule made by many marine phytoplankton | dimethyl sulfide + acrylate | - |
? | |
Organism
| EC Number | Organism | UniProt | Comment | Textmining |
|---|---|---|---|---|
| 4.4.1.3 | Cereibacter sphaeroides | - |
strain 2.4.1, no activity in strain ATCC 17025, gene dddL | - |
| 4.4.1.3 | Fulvimarina pelagi HTCC2506 | - |
gene dddL | - |
| 4.4.1.3 | Pseudooceanicola batsensis HTCC2597 | - |
gene dddL | - |
| 4.4.1.3 | Stappia sp. | - |
gene dddL | - |
| 4.4.1.3 | Stappia sp. KB902 | - |
gene dddL | - |
| 4.4.1.3 | Sulfitobacter sp. EE-36 | - |
gene dddL | - |
| 4.4.1.3 | Yoonia vestfoldensis | - |
gene dddL | - |
Substrates and Products (Substrate)
| EC Number | Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|---|
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | - |
Cereibacter sphaeroides | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | - |
Sulfitobacter sp. EE-36 | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | - |
Fulvimarina pelagi HTCC2506 | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | - |
Yoonia vestfoldensis | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | - |
Pseudooceanicola batsensis HTCC2597 | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | - |
Stappia sp. | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | the alpha-proteobacterium produces the gas dimethylsulfide from dimethylsulfoniopropionate, an abundant antistress molecule made by many marine phytoplankton | Sulfitobacter sp. EE-36 | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | the alpha-proteobacterium produces the gas dimethylsulfide from dimethylsulfoniopropionate, an abundant antistress molecule made by many marine phytoplankton | Fulvimarina pelagi HTCC2506 | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | the alpha-proteobacterium produces the gas dimethylsulfide from dimethylsulfoniopropionate, an abundant antistress molecule made by many marine phytoplankton | Yoonia vestfoldensis | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | the alpha-proteobacterium produces the gas dimethylsulfide from dimethylsulfoniopropionate, an abundant antistress molecule made by many marine phytoplankton | Pseudooceanicola batsensis HTCC2597 | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | the alpha-proteobacterium produces the gas dimethylsulfide from dimethylsulfoniopropionate, an abundant antistress molecule made by many marine phytoplankton | Stappia sp. | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | the alpha-proteobacterium Sulfitobacter EE-36 produces the gas dimethylsulfide from dimethylsulfoniopropionate, an abundant antistress molecule made by many marine phytoplankton | Cereibacter sphaeroides | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | - |
Stappia sp. KB902 | dimethyl sulfide + acrylate | - |
? | |
| 4.4.1.3 | S,S-dimethyl-beta-propiothetin | the alpha-proteobacterium produces the gas dimethylsulfide from dimethylsulfoniopropionate, an abundant antistress molecule made by many marine phytoplankton | Stappia sp. KB902 | dimethyl sulfide + acrylate | - |
? | |
Synonyms
| EC Number | Synonyms | Comment | Organism |
|---|---|---|---|
| 4.4.1.3 | DddL lyase | - |
Cereibacter sphaeroides |
| 4.4.1.3 | DddL lyase | - |
Sulfitobacter sp. EE-36 |
| 4.4.1.3 | DddL lyase | - |
Fulvimarina pelagi HTCC2506 |
| 4.4.1.3 | DddL lyase | - |
Yoonia vestfoldensis |
| 4.4.1.3 | DddL lyase | - |
Pseudooceanicola batsensis HTCC2597 |
| 4.4.1.3 | DddL lyase | - |
Stappia sp. |
| 4.4.1.3 | dimethylsulfoniopropionate lyase | - |
Cereibacter sphaeroides |
| 4.4.1.3 | dimethylsulfoniopropionate lyase | - |
Sulfitobacter sp. EE-36 |
| 4.4.1.3 | dimethylsulfoniopropionate lyase | - |
Fulvimarina pelagi HTCC2506 |
| 4.4.1.3 | dimethylsulfoniopropionate lyase | - |
Yoonia vestfoldensis |
| 4.4.1.3 | dimethylsulfoniopropionate lyase | - |
Pseudooceanicola batsensis HTCC2597 |
| 4.4.1.3 | dimethylsulfoniopropionate lyase | - |
Stappia sp. |
| 4.4.1.3 | DMSP lyase | - |
Cereibacter sphaeroides |
| 4.4.1.3 | DMSP lyase | - |
Sulfitobacter sp. EE-36 |
| 4.4.1.3 | DMSP lyase | - |
Fulvimarina pelagi HTCC2506 |
| 4.4.1.3 | DMSP lyase | - |
Yoonia vestfoldensis |
| 4.4.1.3 | DMSP lyase | - |
Pseudooceanicola batsensis HTCC2597 |
| 4.4.1.3 | DMSP lyase | - |
Stappia sp. |
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