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Literature summary extracted from

  • Zhang, R.; Andersson, C.E.; Savchenko, A.; Skarina, T.; Evdokimova, E.; Beasley, S.; Arrowsmith, C.H.; Edwards, A.M.; Joachimiak, A.; Mowbray, S.L.
    Structure of Escherichia coli ribose-5-phosphate isomerase: a ubiquitous enzyme of the pentose phosphate pathway and the Calvin cycle (2003), Structure, 11, 31-42.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

EC Number Cloned (Comment) Organism
5.3.1.6 overexpression as a His-tagged Se-Met-labeled protein Escherichia coli

Crystallization (Commentary)

EC Number Crystallization (Comment) Organism
5.3.1.6 hanging drop vapor diffusion method, structure of a complex with arabinose 5-phosphate at 1.25 A resolution Escherichia coli

Inhibitors

EC Number Inhibitors Comment Organism Structure
5.3.1.6 arabinose 5-phosphate
-
Escherichia coli
5.3.1.6 phosphate
-
Escherichia coli

KM Value [mM]

EC Number KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
5.3.1.6 3.1
-
D-ribose 5-phosphate
-
Escherichia coli

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
5.3.1.6 D-ribose 5-phosphate Escherichia coli the enzyme plays essential roles in carbohydrate anabolism and catabolism D-ribulose 5-phosphate
-
r

Organism

EC Number Organism UniProt Comment Textmining
5.3.1.6 Escherichia coli P0A7Z0
-
-

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
5.3.1.6 D-ribose 5-diphosphate
-
Escherichia coli D-ribulose 5-diphosphate
-
?
5.3.1.6 D-ribose 5-phosphate
-
Escherichia coli D-ribulose 5-phosphate
-
r
5.3.1.6 D-ribose 5-phosphate the enzyme plays essential roles in carbohydrate anabolism and catabolism Escherichia coli D-ribulose 5-phosphate
-
r
5.3.1.6 D-ribose 5-triphosphate
-
Escherichia coli D-ribulose 5-triphosphate
-
?

Subunits

EC Number Subunits Comment Organism
5.3.1.6 dimer the two subunits in the dimer have different conformations, the result of motion of two largely rigid domains with respect to each other in the subunit Escherichia coli

Turnover Number [1/s]

EC Number Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
5.3.1.6 2100
-
D-ribose 5-phosphate
-
Escherichia coli

Ki Value [mM]

EC Number Ki Value [mM] Ki Value maximum [mM] Inhibitor Comment Organism Structure
5.3.1.6 8
-
phosphate
-
Escherichia coli