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Literature summary extracted from

  • Kamtekar, S.; Kennedy, W.D.; Wang, J.; Stathopoulos, C.; Soll, D.; Steitz, T.A.
    The structural basis of cysteine aminoacylation of tRNAPro by prolyl-tRNA synthetases (2003), Proc. Natl. Acad. Sci. USA, 100, 1673-1678.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

EC Number Cloned (Comment) Organism
6.1.1.15 expression as His-tagged enzyme in Escherichia coli Methanothermobacter thermautotrophicus

Crystallization (Commentary)

EC Number Crystallization (Comment) Organism
6.1.1.15 vapour diffusion method, equal volumes of 3.8 mg/ml protein solution and precipitant solution containing 20 mM Tris, pH 7.5, 5 mM 2-mercaptoethanol, 50-250 mM MgCl2, 20°C, X-ray diffraction structure determination at 2.55-3.1 A, and analysis Methanothermobacter thermautotrophicus
6.1.1.15 vapour-diffusion method, protein solution is mixed with an equal volume of well solution containing 0.2 M ammonium sulfate, 20-30% PEG 4000, 5 mM 2-mercaptoethanol, 0.1 M sodium acetate, pH 4.5, 12-25°C, a few days, X-ray diffraction structure determination at 3.2 A resolution, and analysis Methanocaldococcus jannaschii

Inhibitors

EC Number Inhibitors Comment Organism Structure
6.1.1.15 cysteinyl-sulfamoyl-adenylate i.e. Cys-AMS, intermediate analogue, competitive inhibition Methanothermobacter thermautotrophicus
6.1.1.15 prolyl-sulfamoyl-adenylate i.e. Pro-AMS, intermediate analogue, competitive inhibition Methanothermobacter thermautotrophicus

KM Value [mM]

EC Number KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
6.1.1.15 0.05
-
L-cysteine ATP-diphosphate exchange, pH 7.5, 35°C Methanothermobacter thermautotrophicus
6.1.1.15 0.067
-
L-proline ATP-diphosphate exchange reaction, pH 7.5, 35°C Methanothermobacter thermautotrophicus
6.1.1.15 0.09
-
L-cysteine ATP-diphosphate exchange reaction, pH 7.5, 35°C Methanocaldococcus jannaschii
6.1.1.15 0.285
-
L-proline ATP-diphosphate exchange reaction, pH 7.5, 35°C Methanocaldococcus jannaschii

Metals/Ions

EC Number Metals/Ions Comment Organism Structure
6.1.1.15 Zn2+ chelated by 4 cysteine residues in the C-terminus Methanothermobacter thermautotrophicus
6.1.1.15 Zn2+ chelated by 4 cysteine residues in the C-terminus Methanocaldococcus jannaschii

Natural Substrates/ Products (Substrates)

EC Number Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
6.1.1.15 ATP + L-proline + tRNAPro Methanothermobacter thermautotrophicus
-
AMP + diphosphate + L-prolyl-tRNAPro
-
?
6.1.1.15 ATP + L-proline + tRNAPro Methanocaldococcus jannaschii
-
AMP + diphosphate + L-prolyl-tRNAPro
-
?

Organism

EC Number Organism UniProt Comment Textmining
6.1.1.15 Methanocaldococcus jannaschii
-
-
-
6.1.1.15 Methanothermobacter thermautotrophicus
-
gene proS
-

Purification (Commentary)

EC Number Purification (Comment) Organism
6.1.1.15 recombinant His-tagged enzyme from Escherichia coli Methanothermobacter thermautotrophicus
6.1.1.15 recombinant His-tagged enzyme from expression in Escherichia coli Methanocaldococcus jannaschii

Reaction

EC Number Reaction Comment Organism Reaction ID
6.1.1.15 ATP + L-proline + tRNAPro = AMP + diphosphate + L-prolyl-tRNAPro dual substrate specificity Methanothermobacter thermautotrophicus

Substrates and Products (Substrate)

EC Number Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
6.1.1.15 ATP + L-cysteine + tRNACys
-
Methanothermobacter thermautotrophicus AMP + diphosphate + L-cysteinyl-tRNACys
-
?
6.1.1.15 ATP + L-proline + tRNAPro
-
Methanothermobacter thermautotrophicus AMP + diphosphate + L-prolyl-tRNAPro
-
?
6.1.1.15 ATP + L-proline + tRNAPro
-
Methanocaldococcus jannaschii AMP + diphosphate + L-prolyl-tRNAPro
-
?
6.1.1.15 additional information the enzyme also performs the ATP-diphosphate exchange reaction Methanothermobacter thermautotrophicus ?
-
?

Synonyms

EC Number Synonyms Comment Organism
6.1.1.15 Global RNA synthesis factor
-
Methanothermobacter thermautotrophicus
6.1.1.15 Global RNA synthesis factor
-
Methanocaldococcus jannaschii
6.1.1.15 Pro-tRNA synthetase
-
Methanothermobacter thermautotrophicus
6.1.1.15 Pro-tRNA synthetase
-
Methanocaldococcus jannaschii
6.1.1.15 Proline translase
-
Methanothermobacter thermautotrophicus
6.1.1.15 Proline translase
-
Methanocaldococcus jannaschii
6.1.1.15 Proline--tRNA ligase
-
Methanothermobacter thermautotrophicus
6.1.1.15 Proline--tRNA ligase
-
Methanocaldococcus jannaschii
6.1.1.15 Prolyl RNA synthetase
-
Methanothermobacter thermautotrophicus
6.1.1.15 Prolyl RNA synthetase
-
Methanocaldococcus jannaschii
6.1.1.15 Prolyl-transfer ribonucleate synthetase
-
Methanothermobacter thermautotrophicus
6.1.1.15 Prolyl-transfer ribonucleate synthetase
-
Methanocaldococcus jannaschii
6.1.1.15 Prolyl-transfer ribonucleic acid synthetase
-
Methanothermobacter thermautotrophicus
6.1.1.15 Prolyl-transfer ribonucleic acid synthetase
-
Methanocaldococcus jannaschii
6.1.1.15 Prolyl-transfer RNA synthetase
-
Methanothermobacter thermautotrophicus
6.1.1.15 Prolyl-transfer RNA synthetase
-
Methanocaldococcus jannaschii
6.1.1.15 Prolyl-tRNA synthetase
-
Methanothermobacter thermautotrophicus
6.1.1.15 Prolyl-tRNA synthetase
-
Methanocaldococcus jannaschii
6.1.1.15 ProRS
-
Methanothermobacter thermautotrophicus
6.1.1.15 ProRS
-
Methanocaldococcus jannaschii

Temperature Optimum [°C]

EC Number Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
6.1.1.15 35
-
assay at Methanothermobacter thermautotrophicus
6.1.1.15 35
-
assay at Methanocaldococcus jannaschii

pH Optimum

EC Number pH Optimum Minimum pH Optimum Maximum Comment Organism
6.1.1.15 7.5
-
assay at Methanothermobacter thermautotrophicus
6.1.1.15 7.5
-
assay at Methanocaldococcus jannaschii

Cofactor

EC Number Cofactor Comment Organism Structure
6.1.1.15 ATP
-
Methanothermobacter thermautotrophicus
6.1.1.15 ATP
-
Methanocaldococcus jannaschii

Ki Value [mM]

EC Number Ki Value [mM] Ki Value maximum [mM] Inhibitor Comment Organism Structure
6.1.1.15 0.000025
-
cysteinyl-sulfamoyl-adenylate versus L-proline, pH 7.5, 35°C Methanothermobacter thermautotrophicus
6.1.1.15 0.00005
-
prolyl-sulfamoyl-adenylate versus L-proline, pH 7.5, 35°C Methanothermobacter thermautotrophicus