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Literature summary for 6.1.1.20 extracted from

  • Evdokimov, A.G.; Mekel, M.; Hutchings, K.; Narasimhan, L.; Holler, T.; McGrath, T.; Beattie, B.; Fauman, E.; Yan, C.; Heaslet, H.; Walter, R.; Finzel, B.; Ohren, J.; McConnell, P.; Braden, T.; Sun, F.; Spessard, C.; Banotai, C.; Al-Kassim, L.; Ma, W.; Wengender, P.; Kole, D.; Garceau, N.; Toogood, P.; Liu, J.
    Rational protein engineering in action: The first crystal structure of a phenylalanine tRNA synthetase from Staphylococcus haemolyticus (2008), J. Struct. Biol., 162, 152-169.
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
expression of wild-type and mutant enzymes Staphylococcus haemolyticus

Crystallization (Commentary)

Crystallization (Comment) Organism
native enzyme crystals are of poor quality diffracting only to 3-5 A resolution, engineered mutant enzymes diffracts to 2.0 A resolution, X-ray diffraction structure determination and analysis, overview Staphylococcus haemolyticus

Protein Variants

Protein Variants Comment Organism
additional information construction of enzyme mutants with better crystallization abilities, e.g. a PheRS variant which has both domains I and IV removed, or PheRS surface mutants, overview Staphylococcus haemolyticus

Inhibitors

Inhibitors Comment Organism Structure
1-[3-[(4-pyridin-2-ylpiperazin-1-yl)sulfonyl]phenyl]-3-(1,3-thiazol-2-yl)urea binding structure and inhibition mechanism, the inhibitor molecule binds with ring A deep inside the enzyme, and ring B in the place that is occupied by the aromatic ring of phenylalanine, overview Staphylococcus haemolyticus

Metals/Ions

Metals/Ions Comment Organism Structure
Mg2+
-
Staphylococcus haemolyticus
additional information enzyme metal binding site structure, overview Staphylococcus haemolyticus

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
ATP + L-phenylalanine + tRNAPhe Staphylococcus haemolyticus
-
AMP + diphosphate + L-phenylalanyl-tRNAPhe
-
?

Organism

Organism UniProt Comment Textmining
Staphylococcus haemolyticus
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
ATP + L-phenylalanine + tRNAPhe
-
Staphylococcus haemolyticus AMP + diphosphate + L-phenylalanyl-tRNAPhe
-
?
ATP + L-phenylalanine + tRNAPhe structure-activity relationship, overview Staphylococcus haemolyticus AMP + diphosphate + L-phenylalanyl-tRNAPhe
-
?

Subunits

Subunits Comment Organism
More structure analysis and structure-activity relationship, overview Staphylococcus haemolyticus

Synonyms

Synonyms Comment Organism
phenylalanine tRNA synthetase
-
Staphylococcus haemolyticus
PheRS
-
Staphylococcus haemolyticus

Cofactor

Cofactor Comment Organism Structure
ATP
-
Staphylococcus haemolyticus