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Literature summary for 4.6.1.16 extracted from

  • Tocchini-Valentini, G.D.; Fruscoloni, P.; Tocchini-Valentini, G.P.
    Evolution of introns in the archaeal world (2011), Proc. Natl. Acad. Sci. USA, 108, 4782-4787.
    View publication on PubMedView publication on EuropePMC
Search for more literature for 4.6.1.16

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
pretRNA Schizosaccharomyces pombe
-
 a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
 ?
pretRNA Archaeoglobus fulgidus
-
 a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
 ?
pretRNA Methanocaldococcus jannaschii
-
 a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
 ?
pretRNA Saccharolobus solfataricus
-
 a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
 ?
pretRNA Saccharolobus solfataricus 98/2
-
 a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
 ?

Organism

Organism UniProt Comment Textmining
Archaeoglobus fulgidus O29362
-
-
Methanocaldococcus jannaschii Q58819
-
-
Saccharolobus solfataricus D0KSD0
-
-
Saccharolobus solfataricus 98/2 D0KSD0
-
-
Schizosaccharomyces pombe
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
additional information the enzyme recognizes a bulge-helix-bulge motif Schizosaccharomyces pombe ?
-
 ?
additional information the enzyme recognizes a bulge-helix-bulge motif Archaeoglobus fulgidus ?
-
 ?
additional information the enzyme recognizes a bulge-helix-bulge motif Methanocaldococcus jannaschii ?
-
 ?
additional information the enzyme recognizes a bulge-helix-bulge motif Saccharolobus solfataricus ?
-
 ?
additional information the enzyme recognizes a bulge-helix-bulge motif Saccharolobus solfataricus 98/2 ?
-
 ?
pretRNA
-
 Schizosaccharomyces pombe a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
 ?
pretRNA
-
 Archaeoglobus fulgidus a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
 ?
pretRNA
-
 Methanocaldococcus jannaschii a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
 ?
pretRNA
-
 Saccharolobus solfataricus a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
 ?
pretRNA
-
 Saccharolobus solfataricus 98/2 a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus
-
 ?

Subunits

Subunits Comment Organism
heterodimer
-
 Saccharolobus solfataricus
heterotetramer
-
 Schizosaccharomyces pombe
homodimer
-
 Archaeoglobus fulgidus
homotetramer
-
 Methanocaldococcus jannaschii

Synonyms

Synonyms Comment Organism
AF_0900 locus name Archaeoglobus fulgidus
EndA
-
 Schizosaccharomyces pombe
EndA
-
 Archaeoglobus fulgidus
EndA
-
 Methanocaldococcus jannaschii
EndA
-
 Saccharolobus solfataricus
MJ1424 locus name Methanocaldococcus jannaschii
pre-tRNA splicing endonuclease
-
 Schizosaccharomyces pombe
pre-tRNA splicing endonuclease
-
 Archaeoglobus fulgidus
pre-tRNA splicing endonuclease
-
 Methanocaldococcus jannaschii
pre-tRNA splicing endonuclease
-
 Saccharolobus solfataricus
ssol_1416 locus name Saccharolobus solfataricus