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Literature summary for 4.4.1.5 extracted from

  • Suttisansanee, U.; Lau, K.; Lagishetty, S.; Rao, K.N.; Swaminathan, S.; Sauder, J.M.; Burley, S.K.; Honek, J.F.
    Structural variation in bacterial glyoxalase I enzymes: investigation of the metalloenzyme glyoxalase I from Clostridium acetobutylicum (2011), J. Biol. Chem., 286, 38367-38374.
    View publication on PubMedView publication on EuropePMC

Cloned(Commentary)

Cloned (Comment) Organism
gene clo glxI, cloning in Escherichia coli strain DH5alpha, expression of His-tagged enzyme in Escherichia coli strain BL21(DE3) Clostridium acetobutylicum

Crystallization (Commentary)

Crystallization (Comment) Organism
purified recombinant His6-tagged enzyme with bound Zn2+ or Ni2+, sitting drop vapor diffusion, in 20% v/v isopropyl alcohol and 30% w/v PEG3350 in 0.1 M HEPES buffer, pH 7.5, X-ray diffraction structure determination and analysis at 2.45 A and 2.06 A resolution, respectively. The Ni2+-bound non-His-tagged CLO GlxI structure is solved by molecular replacement using the Zn2+-bound structure as search model Clostridium acetobutylicum

Metals/Ions

Metals/Ions Comment Organism Structure
Cd2+ activates 5% compared to Ni2+ Clostridium acetobutylicum
Co2+ activates 40% compared to Ni2+ Clostridium acetobutylicum
Mn2+ activates 5% compared to Ni2+ Clostridium acetobutylicum
additional information no activation by Zn2+, poor activity with Ca2+ and Mg2+, the active site geometry of the Ni2/Co2-activated enzyme forms an octahedral coordination with one metal atom, two water molecules, and four metal-binding ligands, while the inactive Zn2-bound enzyme form possesses a trigonal bipyramidal geometry with only one water molecule liganded to the metal center Clostridium acetobutylicum
Ni2+ required, best divalent metal ion Clostridium acetobutylicum

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
15818
-
2 * 15818, His6-tagged enzyme, sequence calculation, the enzyme forms two active sites, each within single subunits Clostridium acetobutylicum

Organism

Organism UniProt Comment Textmining
Clostridium acetobutylicum Q97H22 gene clo glxI
-

Purification (Commentary)

Purification (Comment) Organism
recombinant His-tagged enzyme from Escherichia coli strain BL21(DE3) by nickel affinity chromatography, cleavage og the His-tag by thrombin, and elimination of the tag by benzamidine affinity chromatography Clostridium acetobutylicum

Subunits

Subunits Comment Organism
dimer 2 * 15818, His6-tagged enzyme, sequence calculation, the enzyme forms two active sites, each within single subunits Clostridium acetobutylicum

Synonyms

Synonyms Comment Organism
CLO GlxI
-
Clostridium acetobutylicum
Glx1
-
Clostridium acetobutylicum
glyoxalase I
-
Clostridium acetobutylicum

pI Value

Organism Comment pI Value Maximum pI Value
Clostridium acetobutylicum His6-tagged enzyme, sequence calculation
-
6.5

General Information

General Information Comment Organism
metabolism the glyoxalase system catalyzes the conversion of toxic, metabolically produced 2-oxoaldehydes, such as methylglyoxal, into their corresponding nontoxic 2-hydroxycarboxylic acids, leading to detoxification of these cellular metabolites Clostridium acetobutylicum
physiological function the glyoxalase system catalyzes the conversion of toxic, metabolically produced 2-oxoaldehydes, such as methylglyoxal, into their corresponding nontoxic 2-hydroxycarboxylic acids, leading to detoxification of these cellular metabolites Clostridium acetobutylicum