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Literature summary for 3.5.1.88 extracted from
- Crystallization and preliminary X-ray crystallographic analysis of peptide deformylase from Thermus thermophilus HB8 (2004), Acta Crystallogr. Sect. D, 60, 1299-1300.
Cloned(Commentary)
| Cloned (Comment) | Organism |
|---|---|
| into pET-vector for expression in Escherichia coli strain BL21(DE3) | Thermus thermophilus |
Crystallization (Commentary)
| Crystallization (Comment) | Organism |
|---|---|
| by the hanging drop vapour-diffusiuon method using PEG 4000 as a precipitant | Thermus thermophilus |
Metals/Ions
| Metals/Ions | Comment | Organism | Structure |
|---|---|---|---|
| Fe2+ | Ni2+ or Co2+ leads to the retention of almost full catalytic activity | Thermus thermophilus |  |
Natural Substrates/ Products (Substrates)
| Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| formyl-L-methionyl peptide + H2O | Thermus thermophilus | - |
formate + methionyl peptide | - |
? | |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Thermus thermophilus | - |
- |
- |
Purification (Commentary)
| Purification (Comment) | Organism |
|---|---|
| using a TSKgel Blue 5pw column, a Mono Q 10/10 column and a Bio-Scale CHT10-I column | Thermus thermophilus |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| formyl-L-methionyl peptide + H2O | - |
Thermus thermophilus | formate + methionyl peptide | - |
? | |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
- |
Thermus thermophilus | |
| peptide deformylase | - |
Thermus thermophilus |
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Release 2023.1 (January 2023)
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