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Literature summary for 3.4.24.B4 extracted from

  • Jiang, Y.; Abernathy, J.W.; Peatman, E.; Liu, H.; Wang, S.; Xu, D.H.; Kucuktas, H.; Klesius, P.; Liu, Z.
    Identification and characterization of matrix metalloproteinase-13 sequence structure and expression during embryogenesis and infection in channel catfish (Ictalurus punctatus) (2010), Dev. Comp. Immunol., 34, 590-597.
    View publication on PubMed

Cloned(Commentary)

Cloned (Comment) Organism
DNA and amino acid sequence determination and analysis, quantitative RT-PCR analysis expression analysis, overview. Phylogenetic analysis Ictalurus punctatus

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
additional information Ictalurus punctatus MMP-13 preferentially hydrolyzes collagen type II, and has wide substrate specificity, allowing it to degrade several other forms of collagen and other extracellular matrix components ?
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?
type II collagen + H2O Ictalurus punctatus
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?
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?

Organism

Organism UniProt Comment Textmining
Ictalurus punctatus E3SW76
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-

Source Tissue

Source Tissue Comment Organism Textmining
blood
-
Ictalurus punctatus
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brain
-
Ictalurus punctatus
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embryo
-
Ictalurus punctatus
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gill
-
Ictalurus punctatus
-
head kidney
-
Ictalurus punctatus
-
heart
-
Ictalurus punctatus
-
intestine
-
Ictalurus punctatus
-
liver
-
Ictalurus punctatus
-
additional information MMP-13 pattern of expression in various healthy tissues and during embryogenesis, MMP-13 expression is slightly increased in the first day post-fertilization and sharply up-regulated from 1-day postfertilization through hatching, quantitative RT-PCR analysis, overview Ictalurus punctatus
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muscle
-
Ictalurus punctatus
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ovary
-
Ictalurus punctatus
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skin
-
Ictalurus punctatus
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spleen
-
Ictalurus punctatus
-
stomach
-
Ictalurus punctatus
-
trunk kidney
-
Ictalurus punctatus
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
additional information MMP-13 preferentially hydrolyzes collagen type II, and has wide substrate specificity, allowing it to degrade several other forms of collagen and other extracellular matrix components Ictalurus punctatus ?
-
?
type II collagen + H2O
-
Ictalurus punctatus ?
-
?

Synonyms

Synonyms Comment Organism
collagenase-3
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Ictalurus punctatus
MMP-13
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Ictalurus punctatus
More MMP-13 is the third member in the collagenase subfamily of proteases Ictalurus punctatus

General Information

General Information Comment Organism
physiological function MMP-13 is a proteolytic enzyme that plays a key role in degradation and remodelling of host extracellular matrix proteins Ictalurus punctatus