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Literature summary for 3.4.13.9 extracted from

  • Vyas, N.K.; Nickitenko, A.; Rastogi, V.K.; Shah, S.S.; Quiocho, F.A.
    Structural insights into the dual activities of the nerve agent degrading organophosphate anhydrolase/prolidase (2010), Biochemistry, 49, 547-559.
    View publication on PubMed

Crystallization (Commentary)

Crystallization (Comment) Organism
purified enzyme, hanging drop method, mixing of 0.002 ml of protein solution containing 10 mg/ml protein in 1 mM 2-mercaptoethanol, 0.1 mM MnCl2, and 10 mM Tris-HCl, pH 7.2, with 0.002 ml of reservoir solution containing 16% PEG 4000, 20 mM MnCl2, 1 mM 2-mercaptoethanol, 270 mM ammonium acetate, and 60 mM sodium acetate, pH 4.6, at 20°C, 2-4 days, X-ray diffraction structure determination and analysis Alteromonas sp.

Inhibitors

Inhibitors Comment Organism Structure
N,N'-diisopropyldiamidofluorophosphate i.e. DDFP or mipafox Alteromonas sp.

Metals/Ions

Metals/Ions Comment Organism Structure
Mn2+ the enzyme harbors binuclear Mn2+ ions within the active site Alteromonas sp.

Organism

Organism UniProt Comment Textmining
Alteromonas sp.
-
-
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Alteromonas sp. JD6.5
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
additional information the bifunctional enzyme is active on the nerve agent organophosphate substrate diisopropyl fluorophosphate, DFP, producing N,N'-diisopropyldiamidophosphate, binding structure modelling, overview Alteromonas sp. ?
-
?
additional information the bifunctional enzyme is active on the nerve agent organophosphate substrate diisopropyl fluorophosphate, DFP, producing N,N'-diisopropyldiamidophosphate, binding structure modelling, overview Alteromonas sp. JD6.5 ?
-
?

Subunits

Subunits Comment Organism
More The OPAA structure is composed of two domains, amino and carboxy domains, with the latter exhibiting a pita bread architecture and harboring the active site with the binuclear Mn2+ ions Alteromonas sp.

Synonyms

Synonyms Comment Organism
OPAA
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Alteromonas sp.
organophosphate acid anhydrolase
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Alteromonas sp.
organophosphate anhydrolase/prolidase
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Alteromonas sp.
prolidase
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Alteromonas sp.