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Literature summary for 3.2.1.55 extracted from
- Purification and characterization of a novel alpha-L-arabinofuranosidase from Pichia capsulata X91 (2000), Biosci. Biotechnol. Biochem., 64, 1181-1188.
Activating Compound
| Activating Compound | Comment | Organism | Structure |
|---|---|---|---|
| 2-mercaptoethanol | 1 mM, relative activity 102% | Kuraishia capsulata |  |
Application
| Application | Comment | Organism |
|---|---|---|
| nutrition | - |
Aspergillus niger |
| nutrition | - |
Aspergillus terreus |
| nutrition | application of the enzyme in vinification process, fermentation of Muscat grape juice | Kuraishia capsulata |
Crystallization (Commentary)
| Crystallization (Comment) | Organism |
|---|---|
- |
Aspergillus niger |
Inhibitors
| Inhibitors | Comment | Organism | Structure |
|---|---|---|---|
| Cu2+ | - |
Aspergillus terreus | |
| Cu2+ | - |
Kuraishia capsulata | |
| Cu2+ | - |
Rhodotorula flava | |
| Cu2+ | - |
Scopolia japonica | |
| Hg2+ | - |
Aspergillus terreus | |
| Hg2+ | - |
Geobacillus stearothermophilus | |
| Hg2+ | - |
Kuraishia capsulata | |
| Hg2+ | - |
Rhodotorula flava | |
| p-chloromercuribenzoate | - |
Kuraishia capsulata | |
Localization
| Localization | Comment | Organism | GeneOntology No. | Textmining |
|---|---|---|---|---|
| intracellular | - |
Aspergillus niger | 5622 | - |
| intracellular | - |
Kuraishia capsulata | 5622 | - |
Metals/Ions
| Metals/Ions | Comment | Organism | Structure |
|---|---|---|---|
| Ca2+ | - |
Geobacillus stearothermophilus | |
| Ca2+ | 1 mM CaCl2, relative activity 105% | Kuraishia capsulata | |
| Fe2+ | 1 mM FeCl2, relative activity 105% | Kuraishia capsulata | |
Molecular Weight [Da]
| Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
|---|---|---|---|
| 60000 | - |
- |
Aspergillus niger |
| 60000 | - |
- |
Streptomyces diastaticus |
| 60000 | - |
- |
Dichomitus squalens |
| 64000 | - |
4 * 64000, SDS-PAGE | Geobacillus stearothermophilus |
| 72000 | - |
4 * 72000, SDS-PAGE | Kuraishia capsulata |
| 250000 | - |
native-PAGE | Kuraishia capsulata |
| 284000 | - |
- |
Geobacillus stearothermophilus |
Natural Substrates/ Products (Substrates)
| Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| beet arabinan + H2O | Geobacillus stearothermophilus | - |
L-arabinose + ? | - |
ir | |
| beet arabinan + H2O | Aspergillus niger | - |
L-arabinose + ? | - |
ir | |
| beet arabinan + H2O | Butyrivibrio fibrisolvens | - |
L-arabinose + ? | - |
? | |
| beet arabinan + H2O | Aspergillus terreus | - |
L-arabinose + ? | - |
ir | |
| beet arabinan + H2O | Clostridium acetobutylicum | - |
L-arabinose + ? | - |
ir | |
| beet arabinan + H2O | Scopolia japonica | - |
L-arabinose + ? | - |
ir | |
| beet arabinan + H2O | Rhodotorula flava | - |
L-arabinose + ? | - |
ir | |
| beet arabinan + H2O | Kuraishia capsulata | - |
L-arabinose + ? | - |
ir | |
| beet arabinan + H2O | Butyrivibrio fibrisolvens GS113 | - |
L-arabinose + ? | - |
? | |
| grape glycoside + H2O | Kuraishia capsulata | - |
? | - |
? | |
| grape monoterpenyl arabinofuranosylglucoside + H2O | Aspergillus niger | - |
? | - |
? | |
| larchwood arabinogalactan + H2O | Kuraishia capsulata | - |
L-arabinose + ? | - |
? | |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Aspergillus awamori | - |
IFO4033 | - |
| Aspergillus awamori IFO 4033 | - |
IFO4033 | - |
| Aspergillus niger | - |
- |
- |
| Aspergillus terreus | - |
CECT 2663 | - |
| Aspergillus terreus CECT 2663 | - |
CECT 2663 | - |
| Aureobasidium pullulans | - |
- |
- |
| Butyrivibrio fibrisolvens | - |
GS113 | - |
| Butyrivibrio fibrisolvens GS113 | - |
GS113 | - |
| Clostridium acetobutylicum | - |
ATCC 824 | - |
| Dichomitus squalens | - |
- |
- |
| Geobacillus stearothermophilus | - |
T-6 | - |
| Geobacillus stearothermophilus T-6 | - |
T-6 | - |
| Kuraishia capsulata | - |
X91 | - |
| Kuraishia capsulata X91 | - |
X91 | - |
| Rhodotorula flava | - |
- |
- |
| Scopolia japonica | - |
- |
- |
| Streptomyces diastaticus | - |
- |
- |
Purification (Commentary)
| Purification (Comment) | Organism |
|---|---|
- |
Geobacillus stearothermophilus |
- |
Aspergillus niger |
- |
Butyrivibrio fibrisolvens |
- |
Aspergillus terreus |
- |
Clostridium acetobutylicum |
- |
Aspergillus awamori |
- |
Scopolia japonica |
- |
Streptomyces diastaticus |
- |
Kuraishia capsulata |
Source Tissue
| Source Tissue | Comment | Organism | Textmining |
|---|---|---|---|
| callus | - |
Scopolia japonica | - |
Specific Activity [micromol/min/mg]
| Specific Activity Minimum [µmol/min/mg] | Specific Activity Maximum [µmol/min/mg] | Comment | Organism |
|---|---|---|---|
| 36.3 | - |
- |
Kuraishia capsulata |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| 1,5-alpha-L-arabinobiose + H2O | - |
Kuraishia capsulata | L-arabinose | - |
? | |
| 1,5-alpha-L-arabinobiose + H2O | - |
Kuraishia capsulata X91 | L-arabinose | - |
? | |
| 1,5-alpha-L-arabinofuranohexaose + H2O | - |
Aspergillus niger | L-arabinose + L-arabinopentaose | - |
? | |
| 1,5-alpha-L-arabinofuranohexaose + H2O | - |
Kuraishia capsulata | L-arabinose + L-arabinopentaose | - |
? | |
| 1,5-alpha-L-arabinotetraose + H2O | - |
Kuraishia capsulata | L-arabinose | - |
? | |
| 1,5-alpha-L-arabinotetraose + H2O | - |
Kuraishia capsulata X91 | L-arabinose | - |
? | |
| 1,5-alpha-L-arabinotriose + 2 H2O | - |
Aspergillus niger | 3 L-arabinose | - |
? | |
| 1,5-alpha-L-arabinotriose + 2 H2O | - |
Kuraishia capsulata | 3 L-arabinose | - |
? | |
| 1,5-alpha-L-arabinotriose + 2 H2O | - |
Kuraishia capsulata X91 | 3 L-arabinose | - |
? | |
| beet arabinan + H2O | - |
Geobacillus stearothermophilus | L-arabinose + ? | - |
ir | |
| beet arabinan + H2O | - |
Aspergillus niger | L-arabinose + ? | - |
ir | |
| beet arabinan + H2O | - |
Butyrivibrio fibrisolvens | L-arabinose + ? | - |
? | |
| beet arabinan + H2O | - |
Aspergillus terreus | L-arabinose + ? | - |
ir | |
| beet arabinan + H2O | - |
Clostridium acetobutylicum | L-arabinose + ? | - |
ir | |
| beet arabinan + H2O | - |
Scopolia japonica | L-arabinose + ? | - |
ir | |
| beet arabinan + H2O | - |
Rhodotorula flava | L-arabinose + ? | - |
ir | |
| beet arabinan + H2O | - |
Kuraishia capsulata | L-arabinose + ? | - |
ir | |
| beet arabinan + H2O | - |
Butyrivibrio fibrisolvens GS113 | L-arabinose + ? | - |
? | |
| grape glycoside + H2O | - |
Kuraishia capsulata | ? | - |
? | |
| grape monoterpenyl arabinofuranosylglucoside + H2O | - |
Aspergillus niger | ? | - |
? | |
| L-arabinan + H2O | - |
Geobacillus stearothermophilus | (1,5-alpha-L-arabinose)25 + ? | - |
? | |
| L-arabinan + H2O | - |
Aspergillus niger | (1,5-alpha-L-arabinose)25 + ? | - |
? | |
| L-arabinan + H2O | - |
Aspergillus terreus | (1,5-alpha-L-arabinose)25 + ? | - |
? | |
| L-arabinan + H2O | - |
Clostridium acetobutylicum | (1,5-alpha-L-arabinose)25 + ? | - |
? | |
| L-arabinan + H2O | - |
Kuraishia capsulata | (1,5-alpha-L-arabinose)25 + ? | - |
? | |
| L-arabinan + H2O | - |
Aspergillus terreus CECT 2663 | (1,5-alpha-L-arabinose)25 + ? | - |
? | |
| L-arabinan + H2O | - |
Geobacillus stearothermophilus T-6 | (1,5-alpha-L-arabinose)25 + ? | - |
? | |
| L-arabinogalactan + H2O | - |
Geobacillus stearothermophilus | L-arabinose + ? | - |
? | |
| L-arabinogalactan + H2O | - |
Aspergillus niger | L-arabinose + ? | - |
? | |
| L-arabinogalactan + H2O | - |
Aspergillus terreus | L-arabinose + ? | - |
? | |
| L-arabinogalactan + H2O | - |
Dichomitus squalens | L-arabinose + ? | - |
? | |
| L-arabinogalactan + H2O | - |
Kuraishia capsulata | L-arabinose + ? | - |
? | |
| L-arabinogalactan + H2O | - |
Aspergillus terreus CECT 2663 | L-arabinose + ? | - |
? | |
| L-arabinogalactan + H2O | - |
Geobacillus stearothermophilus T-6 | L-arabinose + ? | - |
? | |
| L-arabinopentaose + H2O | - |
Kuraishia capsulata | L-arabinotetraose + L-arabinose | - |
? | |
| L-arabinoxylan + H2O | - |
Geobacillus stearothermophilus | L-arabinose + ? | - |
ir | |
| L-arabinoxylan + H2O | - |
Aspergillus niger | L-arabinose + ? | - |
ir | |
| L-arabinoxylan + H2O | - |
Rhodotorula flava | L-arabinose + ? | - |
ir | |
| L-arabinoxylan + H2O | - |
Streptomyces diastaticus | L-arabinose + ? | - |
ir | |
| L-arabinoxylan + H2O | - |
Geobacillus stearothermophilus T-6 | L-arabinose + ? | - |
ir | |
| larchwood arabinogalactan + H2O | - |
Kuraishia capsulata | L-arabinose + ? | - |
? | |
| additional information | - |
Geobacillus stearothermophilus | ? | - |
? | |
| additional information | - |
Aspergillus niger | ? | - |
? | |
| additional information | - |
Butyrivibrio fibrisolvens | ? | - |
? | |
| additional information | - |
Aspergillus terreus | ? | - |
? | |
| additional information | - |
Clostridium acetobutylicum | ? | - |
? | |
| additional information | - |
Rhodotorula flava | ? | - |
? | |
| additional information | shows very little or no activity towards p-nitrophenyl alpha-L-rhamnopyranoside, p-nitrophenyl-beta-D-glucopyranoside, p-nitrophenyl-beta-D-xylopyranoside and p-nitrophenyl-beta-D-cellobioside | Kuraishia capsulata | ? | - |
? | |
| additional information | - |
Aspergillus terreus CECT 2663 | ? | - |
? | |
| additional information | - |
Butyrivibrio fibrisolvens GS113 | ? | - |
? | |
| additional information | shows very little or no activity towards p-nitrophenyl alpha-L-rhamnopyranoside, p-nitrophenyl-beta-D-glucopyranoside, p-nitrophenyl-beta-D-xylopyranoside and p-nitrophenyl-beta-D-cellobioside | Kuraishia capsulata X91 | ? | - |
? | |
| additional information | - |
Geobacillus stearothermophilus T-6 | ? | - |
? | |
| p-nitrophenyl-alpha-L-arabinofuranoside + H2O | - |
Geobacillus stearothermophilus | p-nitrophenol + L-arabinose | - |
? | |
| p-nitrophenyl-alpha-L-arabinofuranoside + H2O | - |
Aspergillus niger | p-nitrophenol + L-arabinose | - |
? | |
| p-nitrophenyl-alpha-L-arabinofuranoside + H2O | - |
Aspergillus terreus | p-nitrophenol + L-arabinose | - |
? | |
| p-nitrophenyl-alpha-L-arabinofuranoside + H2O | - |
Clostridium acetobutylicum | p-nitrophenol + L-arabinose | - |
? | |
| p-nitrophenyl-alpha-L-arabinofuranoside + H2O | - |
Scopolia japonica | p-nitrophenol + L-arabinose | - |
? | |
| p-nitrophenyl-alpha-L-arabinofuranoside + H2O | - |
Streptomyces diastaticus | p-nitrophenol + L-arabinose | - |
? | |
| p-nitrophenyl-alpha-L-arabinofuranoside + H2O | - |
Kuraishia capsulata | p-nitrophenol + L-arabinose | - |
? | |
| p-nitrophenyl-alpha-L-arabinofuranoside + H2O | - |
Aspergillus terreus CECT 2663 | p-nitrophenol + L-arabinose | - |
? | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Geobacillus stearothermophilus | L-arabinose + phenol | - |
ir | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Aspergillus niger | L-arabinose + phenol | - |
ir | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Butyrivibrio fibrisolvens | L-arabinose + phenol | - |
ir | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Aspergillus terreus | L-arabinose + phenol | - |
ir | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Clostridium acetobutylicum | L-arabinose + phenol | - |
ir | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Aspergillus awamori | L-arabinose + phenol | - |
ir | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Aureobasidium pullulans | L-arabinose + phenol | - |
ir | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Scopolia japonica | L-arabinose + phenol | - |
ir | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Rhodotorula flava | L-arabinose + phenol | - |
ir | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Streptomyces diastaticus | L-arabinose + phenol | - |
ir | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Dichomitus squalens | L-arabinose + phenol | - |
ir | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Kuraishia capsulata | L-arabinose + phenol | - |
ir | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Aspergillus terreus CECT 2663 | L-arabinose + phenol | - |
ir | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Butyrivibrio fibrisolvens GS113 | L-arabinose + phenol | - |
ir | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Aspergillus awamori IFO 4033 | L-arabinose + phenol | - |
ir | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Kuraishia capsulata X91 | L-arabinose + phenol | - |
ir | |
| phenyl alpha-L-arabinofuranoside + H2O | - |
Geobacillus stearothermophilus T-6 | L-arabinose + phenol | - |
ir | |
Subunits
| Subunits | Comment | Organism |
|---|---|---|
| tetramer | 4 * 72000, SDS-PAGE | Kuraishia capsulata |
| tetramer | 4 * 64000, SDS-PAGE | Geobacillus stearothermophilus |
Temperature Optimum [°C]
| Temperature Optimum [°C] | Temperature Optimum Maximum [°C] | Comment | Organism |
|---|---|---|---|
| 50 | - |
- |
Aspergillus niger |
| 50 | - |
- |
Butyrivibrio fibrisolvens |
| 50 | - |
- |
Aspergillus terreus |
| 50 | - |
- |
Kuraishia capsulata |
Temperature Stability [°C]
| Temperature Stability Minimum [°C] | Temperature Stability Maximum [°C] | Comment | Organism |
|---|---|---|---|
| 10 | 60 | - |
Kuraishia capsulata |
pH Optimum
| pH Optimum Minimum | pH Optimum Maximum | Comment | Organism |
|---|---|---|---|
| 6 | - |
- |
Butyrivibrio fibrisolvens |
| 6 | - |
- |
Kuraishia capsulata |
pH Range
| pH Minimum | pH Maximum | Comment | Organism |
|---|---|---|---|
| 3 | 10 | - |
Kuraishia capsulata |
pH Stability
| pH Stability | pH Stability Maximum | Comment | Organism |
|---|---|---|---|
| 1.5 | - |
highly acid stable, retaining 82% of its activity after being maintained for 24 h | Rhodotorula flava |
| 6 | 8 | - |
Kuraishia capsulata |
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