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Literature summary for 3.2.1.51 extracted from

  • Sulzenbacher, G.; Bignon, C.; Nishimura, T.; Tarling, C.A.; Withers, S.G.; Henrissat, B.; Bourne, Y.
    Crystal structure of Thermotoga maritima alpha-L-fucosidase. Insights into the catalytic mechanism and the molecular basis for fucosidosis (2004), J. Biol. Chem., 279, 13119-13128.
    View publication on PubMed

Application

Application Comment Organism
medicine deficiency in enzyme activity is associated with fucosidosis Thermotoga maritima

Crystallization (Commentary)

Crystallization (Comment) Organism
the crystal structure of enzyme is determined at 2.5 A resolution by the MAD method Thermotoga maritima

Protein Variants

Protein Variants Comment Organism
E266A the mutant exhibit very low hydrolytic activity with p-nitrophenyl alpha-L-fucoside Thermotoga maritima
E66A the mutant retains ability to catalyse the hydrolysis of p-nitrophenyl alpha-L-fucoside and fucosyl fluorid, the Km value is increase dramatically Thermotoga maritima

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.05
-
p-nitrophenyl alpha-L-fucoside pH 5.0, 37°C, wild-type enzyme Thermotoga maritima
0.075
-
alpha-L-fucosyl fluoride pH 5.0, 25°C, mutant E266A Thermotoga maritima
0.15
-
alpha-L-fucosyl fluoride pH 5.0, 25°C, wild-type enzyme Thermotoga maritima
2.1
-
p-nitrophenyl alpha-L-fucoside pH 5.0, 37°C, mutant E66A Thermotoga maritima
2.5
-
alpha-L-fucosyl fluoride pH 5.0, 25°C, mutant E66A Thermotoga maritima

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
300000
-
gel filtration Thermotoga maritima

Organism

Organism UniProt Comment Textmining
Thermotoga maritima
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
alpha-L-fucosyl fluoride + H2O
-
Thermotoga maritima alpha-L-fucose + fluoride
-
?
p-nitrophenyl alpha-L-fucoside + H2O
-
Thermotoga maritima p-nitrophenol + alpha-L-fucose
-
?

Subunits

Subunits Comment Organism
hexamer hexamer of two trimers Thermotoga maritima

Turnover Number [1/s]

Turnover Number Minimum [1/s] Turnover Number Maximum [1/s] Substrate Comment Organism Structure
0.13
-
alpha-L-fucosyl fluoride pH 5.0, 25°C, mutant E266A Thermotoga maritima
1.3
-
p-nitrophenyl alpha-L-fucoside pH 5.0, 37°C, mutant E66A Thermotoga maritima
1.4
-
alpha-L-fucosyl fluoride pH 5.0, 25°C, mutant E66A Thermotoga maritima
7.6
-
alpha-L-fucosyl fluoride pH 5.0, 25°C, wild-type enzyme Thermotoga maritima
14.3
-
p-nitrophenyl alpha-L-fucoside pH 5.0, 37°C, wild-type enzyme Thermotoga maritima

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
5
-
-
Thermotoga maritima