BRENDA - Enzyme Database
show all sequences of 3.11.1.2

A comparison of three bacterial phosphonoacetate hydrolases from different environmental sources

McGrath, J.W.; Kulakova, A.N.; Quinn, J.P.; J. Appl. Microbiol. 86, 834-840 (1999)
No PubMed abstract available

Data extracted from this reference:

Inhibitors
Inhibitors
Commentary
Organism
Structure
1,10-phenanthroline
34% inhibition at 1 mM, 76% inhibition at 10 mM
Curtobacterium sp.
1,10-phenanthroline
complete inhibition at 1 mM
Pseudomonas sp.
2-mercaptoethanol
73% inhibition at 10 mM
Curtobacterium sp.
2-mercaptoethanol
58% inhibition at 10 mM
Pseudomonas sp.
2-phosphonopropionic acid
33% inhibition at 10 mM
Curtobacterium sp.
2-phosphonopropionic acid
about 30% inhibition at 10 mM
Pseudomonas sp.
3-phosphonopropionic acid
about 30% inhibition at 10 mM
Pseudomonas sp.
dithiothreitol
47% inhibition at 10 mM
Curtobacterium sp.
dithiothreitol
47% inhibition at 10 mM
Pseudomonas sp.
EDTA
50% inhibition at 2 mM
Curtobacterium sp.
EDTA
complete inhibition at 2 mM
Pseudomonas sp.
iminodiacetic acid
64% inhibition at 10 mM
Curtobacterium sp.
iminodiacetic acid
64% inhibition at 10 mM
Pseudomonas sp.
Mg2+
slight inhibition of 17% at 1 mM
Pseudomonas sp.
additional information
reaction is phosphate insensitive, no inhibition by iodoacetic acid, chloroacetic acid, acetic acid, phosphorous acid
Curtobacterium sp.
additional information
reaction is phosphate insensitive, no inhibition by iodoacetic acid, chloroacetic acid, acetic acid, phosphorous acid
Pseudomonas sp.
Phosphonoformic acid
about 70% inhibition at 10 mM
Curtobacterium sp.
Phosphonoformic acid
about 70% inhibition at 10 mM
Pseudomonas sp.
KM Value [mM]
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
0.0078
-
Phosphonoacetate
pH 7.5, 30°C
Curtobacterium sp.
1.5
-
Phosphonoacetate
pH 7.5, 30°C, 1 mM Zn2+
Pseudomonas sp.
Metals/Ions
Metals/Ions
Commentary
Organism
Structure
Co2+
slightly activates 1.1fold at 1 mM
Curtobacterium sp.
Co2+
activates 3.75fold at 1 mM
Pseudomonas sp.
Mg2+
slightly activates 1.1fold at 1 mM
Curtobacterium sp.
Mn2+
activates 2.7fold at 1 mM
Pseudomonas sp.
additional information
reaction is phosphate insensitive, no effect by Mn2+ or Fe3+, no activation by organophosphononate analogues
Curtobacterium sp.
additional information
reaction is phosphate insensitive, no effect by Fe3+ or Ca2+, no activation by organophosphononate analogues
Pseudomonas sp.
Zn2+
1.3fold activation at 1 mM
Curtobacterium sp.
Zn2+
dependent on, 4-7fold activation at 1 mM
Pseudomonas sp.
Natural Substrates/ Products (Substrates)
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
Phosphonoacetate + H2O
Pseudomonas sp.
route of microbial metabolism of xenobiotic organophosphonates, substrate can serve as the sole source of carbon, energy and phosphate for the organism in the range of 40-100 mM
acetate + phosphate
-
-
?
Phosphonoacetate + H2O
Curtobacterium sp.
route of microbial metabolism of xenobiotic organophosphonates, substrate can serve as the sole source of carbon, energy and phosphate for the organism in the range of 40-100 mM
acetate + phosphate
-
-
?
Phosphonoacetate + H2O
Pseudomonas sp. PA2
route of microbial metabolism of xenobiotic organophosphonates, substrate can serve as the sole source of carbon, energy and phosphate for the organism in the range of 40-100 mM
acetate + phosphate
-
-
?
Phosphonoacetate + H2O
Curtobacterium sp. PA1
route of microbial metabolism of xenobiotic organophosphonates, substrate can serve as the sole source of carbon, energy and phosphate for the organism in the range of 40-100 mM
acetate + phosphate
-
-
?
Organism
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
Curtobacterium sp.
-
substrate-inducible enzyme, expression is independent of the phosphate status of the cell
-
Curtobacterium sp. PA1
-
substrate-inducible enzyme, expression is independent of the phosphate status of the cell
-
Pseudomonas sp.
-
substrate-inducible enzyme, expression is independent of the phosphate status of the cell
-
Pseudomonas sp. PA2
-
substrate-inducible enzyme, expression is independent of the phosphate status of the cell
-
Source Tissue
Source Tissue
Commentary
Organism
Textmining
culture condition:phosphonoacetate-grown cell
linear yield of enzyme in 0-40 mM phosphonoacetate, decrease in activity at higher concentrations
Curtobacterium sp.
-
culture condition:phosphonoacetate-grown cell
linear yield of enzyme in 0-100 mM phosphonoacetate, decrease in activity at higher concentrations
Pseudomonas sp.
-
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
Phosphonoacetate + H2O
route of microbial metabolism of xenobiotic organophosphonates, substrate can serve as the sole source of carbon, energy and phosphate for the organism in the range of 40-100 mM
655816
Pseudomonas sp.
acetate + phosphate
-
-
-
?
Phosphonoacetate + H2O
route of microbial metabolism of xenobiotic organophosphonates, substrate can serve as the sole source of carbon, energy and phosphate for the organism in the range of 40-100 mM
655816
Curtobacterium sp.
acetate + phosphate
-
-
-
?
Phosphonoacetate + H2O
absolutely specific for, overview
655816
Pseudomonas sp.
acetate + phosphate
-
-
-
?
Phosphonoacetate + H2O
absolutely specific for, overview
655816
Curtobacterium sp.
acetate + phosphate
-
-
-
?
Phosphonoacetate + H2O
route of microbial metabolism of xenobiotic organophosphonates, substrate can serve as the sole source of carbon, energy and phosphate for the organism in the range of 40-100 mM
655816
Pseudomonas sp. PA2
acetate + phosphate
-
-
-
?
Phosphonoacetate + H2O
absolutely specific for, overview
655816
Pseudomonas sp. PA2
acetate + phosphate
-
-
-
?
Phosphonoacetate + H2O
route of microbial metabolism of xenobiotic organophosphonates, substrate can serve as the sole source of carbon, energy and phosphate for the organism in the range of 40-100 mM
655816
Curtobacterium sp. PA1
acetate + phosphate
-
-
-
?
Phosphonoacetate + H2O
absolutely specific for, overview
655816
Curtobacterium sp. PA1
acetate + phosphate
-
-
-
?
Temperature Optimum [°C]
Temperature Optimum [°C]
Temperature Optimum Maximum [°C]
Commentary
Organism
60
-
-
Curtobacterium sp.
60
-
-
Pseudomonas sp.
Temperature Range [°C]
Temperature Minimum [°C]
Temperature Maximum [°C]
Commentary
Organism
40
75
half-maximal activity at 40 and 75°C
Curtobacterium sp.
40
75
half-maximal activity at 40 and 75°C
Pseudomonas sp.
Temperature Stability [°C]
Temperature Stability Minimum [°C]
Temperature Stability Maximum [°C]
Commentary
Organism
60
-
30 min, 70% remaining activity, rapid inactivation above
Curtobacterium sp.
60
-
30 min, 78% remaining activity, rapid inactivation above
Pseudomonas sp.
pH Optimum
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
8
-
-
Curtobacterium sp.
8
-
-
Pseudomonas sp.
Inhibitors (protein specific)
Inhibitors
Commentary
Organism
Structure
1,10-phenanthroline
34% inhibition at 1 mM, 76% inhibition at 10 mM
Curtobacterium sp.
1,10-phenanthroline
complete inhibition at 1 mM
Pseudomonas sp.
2-mercaptoethanol
73% inhibition at 10 mM
Curtobacterium sp.
2-mercaptoethanol
58% inhibition at 10 mM
Pseudomonas sp.
2-phosphonopropionic acid
33% inhibition at 10 mM
Curtobacterium sp.
2-phosphonopropionic acid
about 30% inhibition at 10 mM
Pseudomonas sp.
3-phosphonopropionic acid
about 30% inhibition at 10 mM
Pseudomonas sp.
dithiothreitol
47% inhibition at 10 mM
Curtobacterium sp.
dithiothreitol
47% inhibition at 10 mM
Pseudomonas sp.
EDTA
50% inhibition at 2 mM
Curtobacterium sp.
EDTA
complete inhibition at 2 mM
Pseudomonas sp.
iminodiacetic acid
64% inhibition at 10 mM
Curtobacterium sp.
iminodiacetic acid
64% inhibition at 10 mM
Pseudomonas sp.
Mg2+
slight inhibition of 17% at 1 mM
Pseudomonas sp.
additional information
reaction is phosphate insensitive, no inhibition by iodoacetic acid, chloroacetic acid, acetic acid, phosphorous acid
Curtobacterium sp.
additional information
reaction is phosphate insensitive, no inhibition by iodoacetic acid, chloroacetic acid, acetic acid, phosphorous acid
Pseudomonas sp.
Phosphonoformic acid
about 70% inhibition at 10 mM
Curtobacterium sp.
Phosphonoformic acid
about 70% inhibition at 10 mM
Pseudomonas sp.
KM Value [mM] (protein specific)
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
0.0078
-
Phosphonoacetate
pH 7.5, 30°C
Curtobacterium sp.
1.5
-
Phosphonoacetate
pH 7.5, 30°C, 1 mM Zn2+
Pseudomonas sp.
Metals/Ions (protein specific)
Metals/Ions
Commentary
Organism
Structure
Co2+
slightly activates 1.1fold at 1 mM
Curtobacterium sp.
Co2+
activates 3.75fold at 1 mM
Pseudomonas sp.
Mg2+
slightly activates 1.1fold at 1 mM
Curtobacterium sp.
Mn2+
activates 2.7fold at 1 mM
Pseudomonas sp.
additional information
reaction is phosphate insensitive, no effect by Mn2+ or Fe3+, no activation by organophosphononate analogues
Curtobacterium sp.
additional information
reaction is phosphate insensitive, no effect by Fe3+ or Ca2+, no activation by organophosphononate analogues
Pseudomonas sp.
Zn2+
1.3fold activation at 1 mM
Curtobacterium sp.
Zn2+
dependent on, 4-7fold activation at 1 mM
Pseudomonas sp.
Natural Substrates/ Products (Substrates) (protein specific)
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
Phosphonoacetate + H2O
Pseudomonas sp.
route of microbial metabolism of xenobiotic organophosphonates, substrate can serve as the sole source of carbon, energy and phosphate for the organism in the range of 40-100 mM
acetate + phosphate
-
-
?
Phosphonoacetate + H2O
Curtobacterium sp.
route of microbial metabolism of xenobiotic organophosphonates, substrate can serve as the sole source of carbon, energy and phosphate for the organism in the range of 40-100 mM
acetate + phosphate
-
-
?
Phosphonoacetate + H2O
Pseudomonas sp. PA2
route of microbial metabolism of xenobiotic organophosphonates, substrate can serve as the sole source of carbon, energy and phosphate for the organism in the range of 40-100 mM
acetate + phosphate
-
-
?
Phosphonoacetate + H2O
Curtobacterium sp. PA1
route of microbial metabolism of xenobiotic organophosphonates, substrate can serve as the sole source of carbon, energy and phosphate for the organism in the range of 40-100 mM
acetate + phosphate
-
-
?
Source Tissue (protein specific)
Source Tissue
Commentary
Organism
Textmining
culture condition:phosphonoacetate-grown cell
linear yield of enzyme in 0-40 mM phosphonoacetate, decrease in activity at higher concentrations
Curtobacterium sp.
-
culture condition:phosphonoacetate-grown cell
linear yield of enzyme in 0-100 mM phosphonoacetate, decrease in activity at higher concentrations
Pseudomonas sp.
-
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
Phosphonoacetate + H2O
route of microbial metabolism of xenobiotic organophosphonates, substrate can serve as the sole source of carbon, energy and phosphate for the organism in the range of 40-100 mM
655816
Pseudomonas sp.
acetate + phosphate
-
-
-
?
Phosphonoacetate + H2O
route of microbial metabolism of xenobiotic organophosphonates, substrate can serve as the sole source of carbon, energy and phosphate for the organism in the range of 40-100 mM
655816
Curtobacterium sp.
acetate + phosphate
-
-
-
?
Phosphonoacetate + H2O
absolutely specific for, overview
655816
Pseudomonas sp.
acetate + phosphate
-
-
-
?
Phosphonoacetate + H2O
absolutely specific for, overview
655816
Curtobacterium sp.
acetate + phosphate
-
-
-
?
Phosphonoacetate + H2O
route of microbial metabolism of xenobiotic organophosphonates, substrate can serve as the sole source of carbon, energy and phosphate for the organism in the range of 40-100 mM
655816
Pseudomonas sp. PA2
acetate + phosphate
-
-
-
?
Phosphonoacetate + H2O
absolutely specific for, overview
655816
Pseudomonas sp. PA2
acetate + phosphate
-
-
-
?
Phosphonoacetate + H2O
route of microbial metabolism of xenobiotic organophosphonates, substrate can serve as the sole source of carbon, energy and phosphate for the organism in the range of 40-100 mM
655816
Curtobacterium sp. PA1
acetate + phosphate
-
-
-
?
Phosphonoacetate + H2O
absolutely specific for, overview
655816
Curtobacterium sp. PA1
acetate + phosphate
-
-
-
?
Temperature Optimum [°C] (protein specific)
Temperature Optimum [°C]
Temperature Optimum Maximum [°C]
Commentary
Organism
60
-
-
Curtobacterium sp.
60
-
-
Pseudomonas sp.
Temperature Range [°C] (protein specific)
Temperature Minimum [°C]
Temperature Maximum [°C]
Commentary
Organism
40
75
half-maximal activity at 40 and 75°C
Curtobacterium sp.
40
75
half-maximal activity at 40 and 75°C
Pseudomonas sp.
Temperature Stability [°C] (protein specific)
Temperature Stability Minimum [°C]
Temperature Stability Maximum [°C]
Commentary
Organism
60
-
30 min, 70% remaining activity, rapid inactivation above
Curtobacterium sp.
60
-
30 min, 78% remaining activity, rapid inactivation above
Pseudomonas sp.
pH Optimum (protein specific)
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
8
-
-
Curtobacterium sp.
8
-
-
Pseudomonas sp.
Other publictions for EC 3.11.1.2
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Temperature Optimum [°C]
Temperature Range [°C]
Temperature Stability [°C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [°C] (protein specific)
Temperature Range [°C] (protein specific)
Temperature Stability [°C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
734593
Perry
A microfluidic approach for pr ...
Sinorhizobium meliloti
Lab Chip
13
3183-3187
2013
-
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-
1
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-
-
-
-
-
-
-
2
-
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1
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1
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1
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733908
Villarreal-Chiu
The genes and enzymes of phosp ...
Pseudomonas fluorescens
Front. Microbiol.
3
19
2012
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1
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2
2
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718897
Kim
Divergence of chemical functio ...
Pseudomonas fluorescens, Pseudomonas fluorescens 23F
Biochemistry
50
3481-3494
2011
1
-
1
1
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3
-
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3
2
2
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6
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1
1
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4
2
1
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1
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4
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1
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1
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1
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3
4
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3
2
2
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1
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4
2
1
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1
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2
2
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719273
Agarwal
Structural and mechanistic ins ...
Sinorhizobium meliloti
Chem. Biol.
18
1230-1240
2011
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1
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1
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1
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3
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2
2
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719938
Borisova
Genetic and biochemical charac ...
Sinorhizobium meliloti
J. Biol. Chem.
286
22283-22290
2011
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1
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1
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2
-
1
1
1
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4
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1
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1
1
1
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2
1
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1
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1
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2
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1
1
1
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1
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1
1
1
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2
1
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1
1
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1
1
720399
Cooley
Phosphonoacetate biosynthesis: ...
Roseovarius nubinhibens
Microbiology
80
335-340
2011
-
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3
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1
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1
1
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697646
Gilbert
Potential for phosphonoacetate ...
Burkholderia ambifaria, Burkholderia ambifaria AMMD, Burkholderia multivorans, Candidatus Solibacter usitatus, Candidatus Solibacter usitatus Ellin6076, Cupriavidus necator, Cupriavidus necator H16 / ATCC 23440 / NCIB 10442 / S-10-1, Emiliania huxleyi, Karenia mikimotoi, no activity in Vibrio shiloi, Paraburkholderia xenovorans, Photobacterium rosenbergii, Photobacterium rosenbergii CC006, Rhodopseudomonas palustris, Rhodopseudomonas palustris CGA009, Sinorhizobium medicae, Sinorhizobium medicae WSM419, Sinorhizobium meliloti, Sorangium cellulosum, Verminephrobacter eiseniae, Verminephrobacter eiseniae EF01-2, Vibrio campbellii, Vibrio campbellii CC028, Vibrio harveyi
Environ. Microbiol.
11
111-125
2009
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15
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29
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17
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670346
Forlani
Phosphonoacetic acid utilizati ...
Penicillium oxalicum
Mycol. Res.
110
1455-1463
2006
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683482
O'Loughlin
A role for carbon catabolite r ...
Agromyces fucosus, Agromyces fucosus Vs2
FEMS Microbiol. Lett.
261
133-140
2006
-
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4
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684053
Klimek-Ochab
Phosphonoacetate hydrolase fro ...
Penicillium oxalicum
Res. Microbiol.
157
125-135
2006
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1
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2
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1
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1
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1
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1
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1
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1
1
1
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1
1
1
1
1
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655816
McGrath
-
A comparison of three bacteria ...
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18
2
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8
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4
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4
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2
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8
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2
2
2
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2
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18
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2
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8
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4
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2
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8
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2
2
2
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2
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22933
Kulakova
Cloning of the phosphonoacetat ...
Pseudomonas fluorescens
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1
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1
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4
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1
1
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1
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1
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1
1
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22930
McGrath
The purification and propertie ...
Pseudomonas fluorescens 23F, Pseudomonas fluorescens
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1995
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1
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5
1
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3
2
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5
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1
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1
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1
2
1
1
1
1
1
1
1
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1
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5
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1
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3
2
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1
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1
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1
2
1
1
1
1
1
1
1
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22931
McGrath
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A plate assay for the detectio ...
Pseudomonas fluorescens, Pseudomonas fluorescens 23F
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1995
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4
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2
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22932
McMullan
In vitro characterization of a ...
Pseudomonas fluorescens
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1994
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6
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1
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3
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6
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