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Literature summary for 3.1.4.16 extracted from

  • Trulzsch, K.; Roggenkamp, A.; Pelludat, C.; Rakin, A.; Jacobi, C.A.; Heesemann, J.
    Cloning and characterization of the gene encoding periplasmic 2',3'-cyclic phosphodiesterase of Yersinia enterocolitica O:8 (2001), Microbiology, 147, 203-213.
    View publication on PubMed
Search for more literature for 3.1.4.16

Cloned(Commentary)

Cloned (Comment) Organism
cpdB gene, overexpression in Escherichia coli HB101, characterization of the gene Yersinia enterocolitica

Protein Variants

Protein Variants Comment Organism
additional information cpdB insertion mutant Yersinia enterocolitica

Localization

Localization Comment Organism GeneOntology No. Textmining
periplasm enzyme is exported to the periplasmic space Yersinia enterocolitica
-
-

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
68000
-
 x * 71958, CpdB including the N-terminal signal sequence, calculated from the amino acid sequence, x * 68000, mature peptide without the signal sequence, SDS-PAGE Yersinia enterocolitica
71958
-
 x * 71958, CpdB including the N-terminal signal sequence, calculated from the amino acid sequence, x * 68000, mature peptide without the signal sequence, SDS-PAGE Yersinia enterocolitica

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
additional information Yersinia enterocolitica CpdB may be a fitness factor involved in the salvage of nucleotides from the environment ?
-
 ?

Organism

Organism UniProt Comment Textmining
Yersinia enterocolitica P53052 O:8 strains WA-C and WA-314
-

Posttranslational Modification

Posttranslational Modification Comment Organism
proteolytic modification contains an N-terminal signal sequence of 25 amino acids Yersinia enterocolitica

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
cyclic 2',3'-AMP + H2O
-
 Yersinia enterocolitica 3'-AMP
-
 ?
cyclic 2',3'-CMP + H2O
-
 Yersinia enterocolitica 3'-CMP
-
 ?
cyclic 2',3'-GMP + H2O
-
 Yersinia enterocolitica 3'-GMP
-
 ?
cyclic 2',3'-UMP + H2O
-
 Yersinia enterocolitica 3'-UMP
-
 ?
di(p-nitrophenyl) phosphate + H2O
-
 Yersinia enterocolitica p-nitrophenol + p-nitrophenyl phosphate
-
 ?
additional information bifunctional enzyme with 2’,3’-cyclic phosphodiesterase and 3’-nucleotidase activity Yersinia enterocolitica ?
-
 ?
additional information CpdB may be a fitness factor involved in the salvage of nucleotides from the environment Yersinia enterocolitica ?
-
 ?
nucleoside 2',3'-cyclic phosphate + H2O
-
 Yersinia enterocolitica nucleoside 3'-phosphate
-
 ?
p-nitrophenyl phosphorylcholine + H2O
-
 Yersinia enterocolitica ?
-
 ?

Subunits

Subunits Comment Organism
? x * 71958, CpdB including the N-terminal signal sequence, calculated from the amino acid sequence, x * 68000, mature peptide without the signal sequence, SDS-PAGE Yersinia enterocolitica

Synonyms

Synonyms Comment Organism
CpdB
-
 Yersinia enterocolitica

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
37
-
 assay at Yersinia enterocolitica

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7.8
-
 assay at Yersinia enterocolitica