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Literature summary for 3.1.21.1 extracted from

  • Fukano, H.; Suzuki, Y.
    Enzymatic conversion of long DNA to small DNA fragments for the construction of short hairpin RNA expression libraries (2009), Anal. Biochem., 385, 80-84.
    View publication on PubMed

Metals/Ions

Metals/Ions Comment Organism Structure
Mg2+ DNA fragmentation by digestion with DNase I in the presence of Mg2+ followed by blunting with the Klenow fragment improves the yield of small DNA fragments by 4fold as compared to the reaction with DNase I in the presence of Mn2+. In the case of using Mg2+ as a cofactor, DNase I attacks each strand of dsDNA independently Homo sapiens
Mn2+ DNA fragmentation by digestion with DNase I in the presence of Mn2+ followed by blunting with T4 DNA polymerase is 4fold less effective than the reaction with DNase I in the presence of Mg2+. In the reaction with DNase I in the presence of Mn2+, one molecule of DNA is completely cleaved to produce two molecules of DNA Homo sapiens

Organism

Organism UniProt Comment Textmining
Homo sapiens
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
double-stranded DNA + H2O
-
Homo sapiens 5'-phosphooligonucleotides + ?
-
?

Synonyms

Synonyms Comment Organism
deoxyribonuclease I
-
Homo sapiens
DNase I
-
Homo sapiens