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Literature summary for 3.1.13.1 extracted from

  • Bollenbach, T.J.; Schuster, G.; Stern, D.B.
    Cooperation of endo- and exoribonucleases in chloroplast mRNA turnover (2004), Prog. Nucleic Acid Res. Mol. Biol., 78, 305-337.
    View publication on PubMed
Search for more literature for 3.1.13.1

Localization

Localization Comment Organism GeneOntology No. Textmining
chloroplast
-
 Embryophyta 9507
-
cytoplasm
-
 Homo sapiens 5737
-
mitochondrion
-
 Homo sapiens 5739
-
mitochondrion
-
 Saccharomyces cerevisiae 5739
-
mitochondrion
-
 Embryophyta 5739
-
nucleus
-
 Homo sapiens 5634
-

Metals/Ions

Metals/Ions Comment Organism Structure
K+ required for activity Mammalia
K+ required for activity Drosophila sp. (in: flies)
K+ required for activity Escherichia coli
K+ required for activity Homo sapiens
K+ required for activity Saccharomyces cerevisiae
K+ required for activity Haloferax volcanii
K+ required for activity Caenorhabditis elegans
K+ required for activity Embryophyta
K+ required for activity Streptomyces coelicolor
K+ required for activity Chlamydomonas sp.
K+ required for activity Synechocystis sp.
K+ required for activity uncultured Gammaproteobacteria bacterium
Mg2+ required for activity Mammalia
Mg2+ required for activity Drosophila sp. (in: flies)
Mg2+ required for activity Escherichia coli
Mg2+ required for activity Homo sapiens
Mg2+ required for activity Saccharomyces cerevisiae
Mg2+ required for activity Haloferax volcanii
Mg2+ required for activity Caenorhabditis elegans
Mg2+ required for activity Embryophyta
Mg2+ required for activity Streptomyces coelicolor
Mg2+ required for activity Chlamydomonas sp.
Mg2+ required for activity Synechocystis sp.
Mg2+ required for activity uncultured Gammaproteobacteria bacterium

Molecular Weight [Da]

Molecular Weight [Da] Molecular Weight Maximum [Da] Comment Organism
67000
-
 1 * 67000 Mammalia
67000
-
 1 * 67000 Drosophila sp. (in: flies)
67000
-
 1 * 67000 Escherichia coli
67000
-
 1 * 67000 Homo sapiens
67000
-
 1 * 67000 Saccharomyces cerevisiae
67000
-
 1 * 67000 Haloferax volcanii
67000
-
 1 * 67000 Caenorhabditis elegans
67000
-
 1 * 67000 Embryophyta
67000
-
 1 * 67000 Streptomyces coelicolor
67000
-
 1 * 67000 Chlamydomonas sp.
67000
-
 1 * 67000 Synechocystis sp.
67000
-
 1 * 67000 uncultured Gammaproteobacteria bacterium

Organism

Organism UniProt Comment Textmining
Caenorhabditis elegans
-
-
-
Chlamydomonas sp.
-
-
-
Drosophila sp. (in: flies)
-
-
-
Embryophyta
-
-
-
Escherichia coli
-
-
-
Haloferax volcanii
-
-
-
Homo sapiens
-
-
-
Mammalia
-
-
-
no activity in archaebacteria
-
 except Halobacterium species NRC-1
-
Saccharomyces cerevisiae
-
-
-
Streptomyces coelicolor
-
-
-
Synechocystis sp.
-
 cyanobacteria
-
uncultured Gammaproteobacteria bacterium
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
mRNA + H2O
-
 Mammalia 5'-phosphomononucleotide
-
 ?
mRNA + H2O
-
 Drosophila sp. (in: flies) 5'-phosphomononucleotide
-
 ?
mRNA + H2O
-
 Escherichia coli 5'-phosphomononucleotide
-
 ?
mRNA + H2O
-
 Homo sapiens 5'-phosphomononucleotide
-
 ?
mRNA + H2O
-
 Saccharomyces cerevisiae 5'-phosphomononucleotide
-
 ?
mRNA + H2O
-
 Haloferax volcanii 5'-phosphomononucleotide
-
 ?
mRNA + H2O
-
 Caenorhabditis elegans 5'-phosphomononucleotide
-
 ?
mRNA + H2O
-
 Embryophyta 5'-phosphomononucleotide
-
 ?
mRNA + H2O
-
 Streptomyces coelicolor 5'-phosphomononucleotide
-
 ?
mRNA + H2O
-
 Chlamydomonas sp. 5'-phosphomononucleotide
-
 ?
mRNA + H2O
-
 Synechocystis sp. 5'-phosphomononucleotide
-
 ?
mRNA + H2O
-
 uncultured Gammaproteobacteria bacterium 5'-phosphomononucleotide
-
 ?
poly(A) + H2O
-
 Mammalia ?
-
 ?
poly(A) + H2O
-
 Drosophila sp. (in: flies) ?
-
 ?
poly(A) + H2O
-
 Escherichia coli ?
-
 ?
poly(A) + H2O
-
 Homo sapiens ?
-
 ?
poly(A) + H2O
-
 Saccharomyces cerevisiae ?
-
 ?
poly(A) + H2O
-
 Haloferax volcanii ?
-
 ?
poly(A) + H2O
-
 Caenorhabditis elegans ?
-
 ?
poly(A) + H2O
-
 Embryophyta ?
-
 ?
poly(A) + H2O
-
 Streptomyces coelicolor ?
-
 ?
poly(A) + H2O
-
 Chlamydomonas sp. ?
-
 ?
poly(A) + H2O
-
 Synechocystis sp. ?
-
 ?
poly(A) + H2O
-
 uncultured Gammaproteobacteria bacterium ?
-
 ?

Subunits

Subunits Comment Organism
monomer 1 * 67000 Mammalia
monomer 1 * 67000 Drosophila sp. (in: flies)
monomer 1 * 67000 Escherichia coli
monomer 1 * 67000 Homo sapiens
monomer 1 * 67000 Saccharomyces cerevisiae
monomer 1 * 67000 Haloferax volcanii
monomer 1 * 67000 Caenorhabditis elegans
monomer 1 * 67000 Embryophyta
monomer 1 * 67000 Streptomyces coelicolor
monomer 1 * 67000 Chlamydomonas sp.
monomer 1 * 67000 Synechocystis sp.
monomer 1 * 67000 uncultured Gammaproteobacteria bacterium

Synonyms

Synonyms Comment Organism
RNase II
-
 Mammalia
RNase II
-
 Drosophila sp. (in: flies)
RNase II
-
 Escherichia coli
RNase II
-
 Homo sapiens
RNase II
-
 Saccharomyces cerevisiae
RNase II
-
 Haloferax volcanii
RNase II
-
 Caenorhabditis elegans
RNase II
-
 Embryophyta
RNase II
-
 Streptomyces coelicolor
RNase II
-
 Chlamydomonas sp.
RNase II
-
 Synechocystis sp.
RNase II
-
 uncultured Gammaproteobacteria bacterium