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Literature summary for 2.7.7.6 extracted from
- Evaluation of the DNA-dependent RNA polymerase beta-subunit gene (rpoB) for phytoplasma classification and phylogeny (2013), Int. J. Syst. Evol. Microbiol., 63, 3904-3914.
Cloned(Commentary)
| Cloned (Comment) | Organism |
|---|---|
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Oenothera biennis' phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Stellaria media' phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | Peanut witches'-broom phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Prunus persica' phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Euphorbia pulcherrima' phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Spiraea sp.' phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Asclepias syriaca' phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Heracleum sosnowskyi' phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Malus domestica' phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | Candidatus Phytoplasma mali |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Capsicum annuum' phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Gomphocarpus physocarpus' phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Fragaria x ananassa' phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Lycopersicon esculentum' phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Lactuca sativa' phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Catharanthus roseus' phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Zea mays' phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | Onion yellows phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Trifolium repens' phytoplasma |
| gene rpoB, encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasma, genetic structure, genotyping and phylogenetic analysis, detailed overview | 'Poa pratensis' phytoplasma |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| 'Asclepias syriaca' phytoplasma | S5ZC84 | beta-subunit; gene rpoB, Asclepias syriaca from Virginia, USA | - |
| 'Asclepias syriaca' phytoplasma | S5ZYX9 | beta-subunit; gene rpoB, Asclepias syriaca from New York, USA | - |
| 'Asclepias syriaca' phytoplasma Milkweed yellows | S5ZC84 | beta-subunit; gene rpoB, Asclepias syriaca from Virginia, USA | - |
| 'Asclepias syriaca' phytoplasma Milkweed yellows | S5ZYX9 | beta-subunit; gene rpoB, Asclepias syriaca from New York, USA | - |
| 'Capsicum annuum' phytoplasma | S5ZID9 | beta-subunit; gene rpoB, Capsicum annum from Serbia | - |
| 'Capsicum annuum' phytoplasma Candidatus Phytoplasma solani | S5ZID9 | beta-subunit; gene rpoB, Capsicum annum from Serbia | - |
| 'Catharanthus roseus' phytoplasma | S5ZYX4 | beta-subunit; gene rpoB, Catharanthus roseus from Maryland, USA | - |
| 'Catharanthus roseus' phytoplasma Maryland aster yellows | S5ZYX4 | beta-subunit; gene rpoB, Catharanthus roseus from Maryland, USA | - |
| 'Euphorbia pulcherrima' phytoplasma | S6A6J2 | beta-subunit; gene rpoB, Euphorbia pulcherrima from USA | - |
| 'Euphorbia pulcherrima' phytoplasma Poinsettia branch-inducing | S6A6J2 | beta-subunit; gene rpoB, Euphorbia pulcherrima from USA | - |
| 'Fragaria x ananassa' phytoplasma | S5ZYY2 | beta-subunit; gene rpoB, Fragaria x ananassa from Lithuania | - |
| 'Fragaria x ananassa' phytoplasma Candidatus Phytoplasma fragariae | S5ZYY2 | beta-subunit; gene rpoB, Fragaria x ananassa from Lithuania | - |
| 'Gomphocarpus physocarpus' phytoplasma | B1VAM6 | beta-subunit; gene rpoB, Gomphocarpus physocarpus from Australia | - |
| 'Gomphocarpus physocarpus' phytoplasma Candidatus Phytoplasma australiense | B1VAM6 | beta-subunit; gene rpoB, Gomphocarpus physocarpus from Australia | - |
| 'Heracleum sosnowskyi' phytoplasma | S5ZQZ8 | beta-subunit; gene rpoB, Heracleum sosnowskyi from Lithuania | - |
| 'Heracleum sosnowskyi' phytoplasma Heracleum yellows | S5ZQZ8 | beta-subunit; gene rpoB, Heracleum sosnowskyi from Lithuania | - |
| 'Lactuca sativa' phytoplasma | Q2NJ15 | beta-subunit; gene rpoB, Lactuca sativa from Ohio, USA | - |
| 'Lactuca sativa' phytoplasma AYWB | Q2NJ15 | beta-subunit; gene rpoB, Lactuca sativa from Ohio, USA | - |
| 'Lycopersicon esculentum' phytoplasma | S5ZIB8 | beta-subunit; gene rpoB, Lycopersicon esculentum from Arkansas, USA | - |
| 'Lycopersicon esculentum' phytoplasma | S5ZQY2 | beta-subunit; gene rpoB, Lycopersicon esculentum from Japan | - |
| 'Lycopersicon esculentum' phytoplasma Tomato big bud | S5ZIB8 | beta-subunit; gene rpoB, Lycopersicon esculentum from Arkansas, USA | - |
| 'Lycopersicon esculentum' phytoplasma Tomato yellows | S5ZQY2 | beta-subunit; gene rpoB, Lycopersicon esculentum from Japan | - |
| 'Malus domestica' phytoplasma | S6A6J3 | beta-subunit; gene rpoB, Malus domestica from Germany | - |
| 'Malus domestica' phytoplasma Candidatus Phytoplasma mali | S6A6J3 | beta-subunit; gene rpoB, Malus domestica from Germany | - |
| 'Oenothera biennis' phytoplasma | S5ZYX7 | beta-subunit; gene rpoB, Oenothera biennis from Lithuania | - |
| 'Oenothera biennis' phytoplasma Oenothera biennis yellows | S5ZYX7 | beta-subunit; gene rpoB, Oenothera biennis from Lithuania | - |
| 'Poa pratensis' phytoplasma | S5ZIC5 | beta-subunit; gene rpoB, Poa pratensis from Lithuania | - |
| 'Poa pratensis' phytoplasma Poa stunt | S5ZIC5 | beta-subunit; gene rpoB, Poa pratensis from Lithuania | - |
| 'Prunus persica' phytoplasma | S5ZQY9 | beta-subunit; gene rpoB, Prunus persica from Canada | - |
| 'Prunus persica' phytoplasma Canada peach X-disease | S5ZQY9 | beta-subunit; gene rpoB, Prunus persica from Canada | - |
| 'Spiraea sp.' phytoplasma | S5ZID2 | beta-subunit; gene rpoB, Spiraea sp. from New York, USA | - |
| 'Spiraea sp.' phytoplasma Spiraea stunt | S5ZID2 | beta-subunit; gene rpoB, Spiraea sp. from New York, USA | - |
| 'Stellaria media' phytoplasma | S5ZC79 | beta-subunit; gene rpoB, Stellaria media from Lithuania | - |
| 'Stellaria media' phytoplasma Chickweed yellows | S5ZC79 | beta-subunit; gene rpoB, Stellaria media from Lithuania | - |
| 'Trifolium repens' phytoplasma | S6A6J1 | beta-subunit; gene rpoB, Trifolium repens from Canada | - |
| 'Trifolium repens' phytoplasma Clover phyllody | S6A6J1 | beta-subunit; gene rpoB, Trifolium repens from Canada | - |
| 'Zea mays' phytoplasma | S5ZC71 | beta-subunit; gene rpoB, Zeamays from Mexico | - |
| 'Zea mays' phytoplasma Maize bushy stunt | S5ZC71 | beta-subunit; gene rpoB, Zeamays from Mexico | - |
| Candidatus Phytoplasma mali | B3QZH0 | beta-subunit; gene rpoB, Malus domesticus from Germany | - |
| Candidatus Phytoplasma mali AT | B3QZH0 | beta-subunit; gene rpoB, Malus domesticus from Germany | - |
| Onion yellows phytoplasma | Q6YQW3 | beta-subunit; gene rpoB, Chrysanthemum coronarium from Japan | - |
| Onion yellows phytoplasma OY-M | Q6YQW3 | beta-subunit; gene rpoB, Chrysanthemum coronarium from Japan | - |
| Peanut witches'-broom phytoplasma | A7XDR4 | beta-subunit; gene rpoB, Arachis hypogaea from China | - |
| Peanut witches'-broom phytoplasma Peanut witches-broom | A7XDR4 | beta-subunit; gene rpoB, Arachis hypogaea from China | - |
General Information
| General Information | Comment | Organism |
|---|---|---|
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Oenothera biennis' phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Stellaria media' phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | Peanut witches'-broom phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Prunus persica' phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Euphorbia pulcherrima' phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Spiraea sp.' phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Asclepias syriaca' phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Heracleum sosnowskyi' phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Malus domestica' phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | Candidatus Phytoplasma mali |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Capsicum annuum' phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Gomphocarpus physocarpus' phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Fragaria x ananassa' phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Lycopersicon esculentum' phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Lactuca sativa' phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Catharanthus roseus' phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Zea mays' phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | Onion yellows phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Trifolium repens' phytoplasma |
| evolution | genotyping and phylogenetic analysis of gene rpoB encoding the beta subunit of the DNA-directed RNA polymerase of phytoplasmas from different plant origins, detailed overview | 'Poa pratensis' phytoplasma |
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