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Literature summary for 2.7.4.9 extracted from

  • Singh, V.K.; Doharey, P.K.; Kumar, V.; Saxena, J.K.; Siddiqi, M.I.; Rathaur, S.; Narender, T.
    Synthesis, molecular docking and Brugia malayi thymidylate kinase (BmTMK) enzyme inhibition study of novel derivatives of [6]-shogaol (2015), Eur. J. Med. Chem., 93, 74-82.
    View publication on PubMed
Search for more literature for 2.7.4.9

Crystallization (Commentary)

Crystallization (Comment) Organism
molecular docking studies using inhibitors (4E)-1-(4-hydroxy-3-methoxyphenyl)dec-4-en-3-one, 1-(1-(4-hydroxy-3-methoxyphenyl)-3-oxodecan-5-yl)-5-methylpyrimidine-2,4-(1H,3H)-dione, 5-bromo-1-(1-(4-hydroxy-3-methoxyphenyl)-3-oxodecan-5-yl)-pyrimidine-2,4-(1H,3H)-dione Wolbachia endosymbiont of Brugia malayi

Inhibitors

Inhibitors Comment Organism Structure
(4E)-1-(4-hydroxy-3-methoxyphenyl)dec-4-en-3-one i.e. [6]-shogaol, isolated from Zingiber officinale Wolbachia endosymbiont of Brugia malayi
1-(1-(4-hydroxy-3-methoxyphenyl)-3-oxodecan-5-yl)-5-methylpyrimidine-2,4-(1H,3H)-dione i.e. shogaol with thymine head group Wolbachia endosymbiont of Brugia malayi
5-bromo-1-(1-(4-hydroxy-3-methoxyphenyl)-3-oxodecan-5-yl)-pyrimidine-2,4-(1H,3H)-dione i.e. shogaol with bromouracil head group Wolbachia endosymbiont of Brugia malayi

KM Value [mM]

KM Value [mM] KM Value Maximum [mM] Substrate Comment Organism Structure
0.017
-
 dTMP pH 7.4, temperature not specified in the publication Wolbachia endosymbiont of Brugia malayi

Organism

Organism UniProt Comment Textmining
Wolbachia endosymbiont of Brugia malayi Q5GTD5
-
-
Wolbachia endosymbiont of Brugia malayi TRS Q5GTD5
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
ATP + dTMP
-
 Wolbachia endosymbiont of Brugia malayi ADP + dTDP
-
 ?
ATP + dTMP
-
 Wolbachia endosymbiont of Brugia malayi TRS ADP + dTDP
-
 ?

Ki Value [mM]

Ki Value [mM] Ki Value maximum [mM] Inhibitor Comment Organism Structure
0.0066
-
 1-(1-(4-hydroxy-3-methoxyphenyl)-3-oxodecan-5-yl)-5-methylpyrimidine-2,4-(1H,3H)-dione pH 7.4, temperature not specified in the publication Wolbachia endosymbiont of Brugia malayi
0.0083
-
 5-bromo-1-(1-(4-hydroxy-3-methoxyphenyl)-3-oxodecan-5-yl)-pyrimidine-2,4-(1H,3H)-dione pH 7.4, temperature not specified in the publication Wolbachia endosymbiont of Brugia malayi
0.0108
-
 (4E)-1-(4-hydroxy-3-methoxyphenyl)dec-4-en-3-one pH 7.4, temperature not specified in the publication Wolbachia endosymbiont of Brugia malayi