BRENDA - Enzyme Database show
show all sequences of 2.6.1.36

L-Lysine:alpha-ketoglutarate aminotransferase. II. Purification, crystallization, and properties

Soda, K.; Misono, H.; Biochemistry 7, 4110-4119 (1968)

Data extracted from this reference:

Crystallization (Commentary)
Crystallization
Organism
-
Flavobacterium lutescens
General Stability
General Stability
Organism
pyridoxal 5'-phosphate, 0.1 mM, or 2-mercaptoethanol, 0.02%, protects against heat inactivation
Flavobacterium lutescens
Inhibitors
Inhibitors
Commentary
Organism
Structure
additional information
incubation of the enzyme with L-lysine in the presence of high concentrations of phosphate gives an inactive form of the enzyme (semiapoenzyme), reactivation with pyridoxal 5'-phosphate
Flavobacterium lutescens
KM Value [mM]
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
0.13
-
2-oxoglutarate
cosubstrate L-ornithine, pH 8.0, 37°C
Flavobacterium lutescens
0.5
-
2-oxoglutarate
L-lysine, pH 8.0, 37°C
Flavobacterium lutescens
2
-
L-ornithine
pH 8.0, 37°C
Flavobacterium lutescens
2.8
-
L-lysine
pH 8.0, 37°C
Flavobacterium lutescens
Molecular Weight [Da]
Molecular Weight [Da]
Molecular Weight Maximum [Da]
Commentary
Organism
116000
-
sedimentation equilibrium method
Flavobacterium lutescens
Natural Substrates/ Products (Substrates)
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
L-lysine + 2-oxoglutarate
Flavobacterium lutescens
-
2-aminoadipate 6-semialdehyde + L-glutamate
-
-
-
Organism
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
Flavobacterium lutescens
-
i.e. Achromobacter liquidum
-
Purification (Commentary)
Commentary
Organism
-
Flavobacterium lutescens
Specific Activity [micromol/min/mg]
Specific Activity Minimum [µmol/min/mg]
Specific Activity Maximum [µmol/min/mg]
Commentary
Organism
18.67
-
pH 8.0, 37°C
Flavobacterium lutescens
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
L-lysine + 2-oxoglutarate
-
637017
Flavobacterium lutescens
2-aminoadipate 6-semialdehyde + L-glutamate
-
-
-
-
L-lysine + 2-oxoglutarate
2-oxoglutarate is the only active amino acceptor
637017
Flavobacterium lutescens
2-aminoadipate 6-semialdehyde + L-glutamate
-
637017
Flavobacterium lutescens
?
L-ornithine + 2-oxoglutarate
-
637017
Flavobacterium lutescens
? + L-glutamate
-
-
-
?
Temperature Stability [°C]
Temperature Stability Minimum [°C]
Temperature Stability Maximum [°C]
Commentary
Organism
additional information
-
pyridoxal 5'-phosphate, 0.1 mM, or 2-mercaptoethanol, 0.02%, protects against heat inactivation
Flavobacterium lutescens
55
-
pH 6.0-7.5, 5 min, stable, partially purified enzyme
Flavobacterium lutescens
pH Optimum
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
7.5
-
substrates L-ornithine + 2-oxoglutarate
Flavobacterium lutescens
8.3
8.5
substrates lysine + 2-oxoglutarate
Flavobacterium lutescens
pH Range
pH Minimum
pH Maximum
Commentary
Organism
6
9.5
about 40% of maximum activity at pH 6 and pH 9.5, substrates ornithine + 2-oxoglutarate
Flavobacterium lutescens
7
10
pH 7: about 50% of maximum activity, pH 10: about 30% of maximum activity
Flavobacterium lutescens
pH Stability
pH Stability
pH Stability Maximum
Commentary
Organism
6
7.5
55°C, 5 min, stable, partially purified enzyme
Flavobacterium lutescens
Cofactor
Cofactor
Commentary
Organism
Structure
pyridoxal 5'-phosphate
2 mol of pyridoxal 5'-phosphate per mol of holoenzyme; a pyridoxal phosphate protein; Km: 0.000357 mM
Flavobacterium lutescens
pyridoxamine 5'-phosphate
can replace pyridoxal 5'-phosphate, Km: 0.00715 mM
Flavobacterium lutescens
Cofactor (protein specific)
Cofactor
Commentary
Organism
Structure
pyridoxal 5'-phosphate
2 mol of pyridoxal 5'-phosphate per mol of holoenzyme; a pyridoxal phosphate protein; Km: 0.000357 mM
Flavobacterium lutescens
pyridoxamine 5'-phosphate
can replace pyridoxal 5'-phosphate, Km: 0.00715 mM
Flavobacterium lutescens
Crystallization (Commentary) (protein specific)
Crystallization
Organism
-
Flavobacterium lutescens
General Stability (protein specific)
General Stability
Organism
pyridoxal 5'-phosphate, 0.1 mM, or 2-mercaptoethanol, 0.02%, protects against heat inactivation
Flavobacterium lutescens
Inhibitors (protein specific)
Inhibitors
Commentary
Organism
Structure
additional information
incubation of the enzyme with L-lysine in the presence of high concentrations of phosphate gives an inactive form of the enzyme (semiapoenzyme), reactivation with pyridoxal 5'-phosphate
Flavobacterium lutescens
KM Value [mM] (protein specific)
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
0.13
-
2-oxoglutarate
cosubstrate L-ornithine, pH 8.0, 37°C
Flavobacterium lutescens
0.5
-
2-oxoglutarate
L-lysine, pH 8.0, 37°C
Flavobacterium lutescens
2
-
L-ornithine
pH 8.0, 37°C
Flavobacterium lutescens
2.8
-
L-lysine
pH 8.0, 37°C
Flavobacterium lutescens
Molecular Weight [Da] (protein specific)
Molecular Weight [Da]
Molecular Weight Maximum [Da]
Commentary
Organism
116000
-
sedimentation equilibrium method
Flavobacterium lutescens
Natural Substrates/ Products (Substrates) (protein specific)
Natural Substrates
Organism
Commentary (Nat. Sub.)
Natural Products
Commentary (Nat. Pro.)
Organism (Nat. Pro.)
Reversibility
L-lysine + 2-oxoglutarate
Flavobacterium lutescens
-
2-aminoadipate 6-semialdehyde + L-glutamate
-
-
-
Purification (Commentary) (protein specific)
Commentary
Organism
-
Flavobacterium lutescens
Specific Activity [micromol/min/mg] (protein specific)
Specific Activity Minimum [µmol/min/mg]
Specific Activity Maximum [µmol/min/mg]
Commentary
Organism
18.67
-
pH 8.0, 37°C
Flavobacterium lutescens
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
L-lysine + 2-oxoglutarate
-
637017
Flavobacterium lutescens
2-aminoadipate 6-semialdehyde + L-glutamate
-
-
-
-
L-lysine + 2-oxoglutarate
2-oxoglutarate is the only active amino acceptor
637017
Flavobacterium lutescens
2-aminoadipate 6-semialdehyde + L-glutamate
-
637017
Flavobacterium lutescens
?
L-ornithine + 2-oxoglutarate
-
637017
Flavobacterium lutescens
? + L-glutamate
-
-
-
?
Temperature Stability [°C] (protein specific)
Temperature Stability Minimum [°C]
Temperature Stability Maximum [°C]
Commentary
Organism
additional information
-
pyridoxal 5'-phosphate, 0.1 mM, or 2-mercaptoethanol, 0.02%, protects against heat inactivation
Flavobacterium lutescens
55
-
pH 6.0-7.5, 5 min, stable, partially purified enzyme
Flavobacterium lutescens
pH Optimum (protein specific)
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
7.5
-
substrates L-ornithine + 2-oxoglutarate
Flavobacterium lutescens
8.3
8.5
substrates lysine + 2-oxoglutarate
Flavobacterium lutescens
pH Range (protein specific)
pH Minimum
pH Maximum
Commentary
Organism
6
9.5
about 40% of maximum activity at pH 6 and pH 9.5, substrates ornithine + 2-oxoglutarate
Flavobacterium lutescens
7
10
pH 7: about 50% of maximum activity, pH 10: about 30% of maximum activity
Flavobacterium lutescens
pH Stability (protein specific)
pH Stability
pH Stability Maximum
Commentary
Organism
6
7.5
55°C, 5 min, stable, partially purified enzyme
Flavobacterium lutescens
Other publictions for EC 2.6.1.36
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Temperature Optimum [°C]
Temperature Range [°C]
Temperature Stability [°C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [°C] (protein specific)
Temperature Range [°C] (protein specific)
Temperature Stability [°C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
738029
Parthiban
Design and development of Myco ...
Mycobacterium tuberculosis, Mycobacterium tuberculosis H37Rv
Chem. Biol. Drug Des.
87
265-274
2016
-
-
-
-
-
-
2
-
-
-
-
-
-
5
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
2
-
-
-
-
-
-
-
2
2
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
738136
Seo
Lysine epsilon-aminotransferas ...
Saccharopolyspora erythraea, Saccharopolyspora erythraea DSM 40517
Enzyme Microb. Technol.
84
11-16
2016
-
-
-
-
-
-
-
-
-
-
-
-
-
2
-
-
-
-
-
-
1
-
4
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
-
4
-
-
-
-
-
-
-
-
-
-
1
1
-
-
-
739673
Duan
Mycobacterium lysine epsilon-a ...
Mycobacterium tuberculosis, Mycobacterium tuberculosis H37Rv
Sci. Rep.
6
19695
2016
-
-
-
-
-
-
-
-
-
-
-
-
-
8
-
-
-
-
-
-
-
-
-
-
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-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
1
1
1
-
-
737607
Tripathi
Mutational analysis of Mycobac ...
Mycobacterium tuberculosis, Mycobacterium tuberculosis ATCC 25618
Biochem. Biophys. Res. Commun.
463
154-160
2015
-
-
-
1
4
-
-
4
-
-
-
-
-
2
-
-
-
-
-
-
-
-
2
-
-
-
-
4
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-
1
4
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-
-
-
4
-
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-
-
-
-
-
-
2
-
-
-
-
4
-
-
-
-
-
-
-
-
-
-
739738
Devi
Discovery of novel lysine ?-am ...
Mycobacterium tuberculosis, Mycobacterium tuberculosis H37Rv
Tuberculosis
95
786-794
2015
-
-
-
1
-
-
3
-
-
-
-
-
-
5
-
-
-
-
-
-
-
-
-
-
-
-
2
-
-
-
-
-
-
-
3
-
-
-
-
1
-
-
3
3
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
2
-
-
-
-
-
-
-
-
-
-
-
722136
Hanson
Enzymatic preparation of 5-hyd ...
Sphingomonas paucimobilis, Sphingomonas paucimobilis SC 16113
Enzyme Microb. Technol.
48
445-453
2011
-
-
1
-
-
-
-
-
-
-
-
-
-
2
-
-
-
-
-
-
-
-
6
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
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-
-
-
-
-
-
-
6
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
700004
Liras
Enzymology of beta-lactam comp ...
Actinomyces sp.
Methods Enzymol.
458
401-429
2009
-
1
-
-
-
-
-
-
-
-
1
1
-
1
-
-
1
-
-
-
1
-
1
-
-
-
-
-
-
-
-
1
-
-
-
-
1
-
1
-
-
-
-
-
-
-
-
-
1
1
-
-
-
1
-
-
1
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
688801
Dube
-
Identification of in vitro inh ...
Mycobacterium tuberculosis
Med. Chem. Res.
17
182-188
2008
-
-
-
1
-
-
3
-
-
-
-
-
-
1
-
-
-
-
-
-
-
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-
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1
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3
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-
-
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-
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-
-
-
-
-
-
-
-
-
-
-
-
-
-
674139
Wu
Synthesis of 1-piperideine-6-c ...
Streptomyces clavuligerus
J. Agric. Food Chem.
55
1767-1772
2007
-
1
1
-
-
-
-
-
-
-
3
-
-
4
-
-
1
-
-
-
2
-
3
1
1
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-
1
-
-
1
-
-
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1
2
1
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-
-
-
-
-
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-
4
-
-
-
-
1
-
-
2
-
3
1
2
-
-
-
2
-
-
-
-
-
-
-
-
-
671149
Tripathi
Overexpression, purification a ...
Mycobacterium tuberculosis, Mycobacterium tuberculosis H37Rv
Acta Crystallogr. Sect. F
F62
572-575
2006
-
-
-
1
-
-
-
-
-
-
1
-
-
154
-
-
1
-
-
-
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-
2
1
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1
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1
1
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1
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1
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-
2
1
-
-
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-
-
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-
-
-
-
-
675405
Mani Tripathi
Direct evidence for a glutamat ...
Mycobacterium tuberculosis, Mycobacterium tuberculosis H37Rv
J. Mol. Biol.
362
877-886
2006
-
-
-
1
-
-
-
2
-
-
1
-
-
7
-
-
1
-
-
-
-
-
1
1
-
-
-
2
-
-
-
1
-
-
-
-
-
-
1
1
-
-
-
-
-
2
-
-
1
-
-
-
-
1
-
-
-
-
1
1
-
-
-
2
-
-
-
-
-
-
-
-
-
-
392143
Fujii
Biotransformation of L-lysine ...
Flavobacterium lutescens
Biosci. Biotechnol. Biochem.
66
622-627
2002
-
-
-
-
-
-
-
-
-
-
-
1
-
1
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2
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1
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2
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-
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637029
Fujii
Characterization of L-lysine 6 ...
Flavobacterium lutescens
J. Biochem.
128
391-397
2000
-
-
1
-
-
-
-
-
-
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3
-
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1
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1
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1
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1
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3
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1
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1
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-
-
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-
-
-
637030
Khetan
-
Heterogeneous distribution of ...
Streptomyces clavuligerus
Microbiology
146
1869-1880
2000
-
-
-
-
1
-
-
-
-
-
-
1
-
1
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1
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1
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1
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1
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-
-
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-
-
-
-
-
637026
Rius
-
Regulation of lysine epsilon-a ...
Streptomyces clavuligerus
Appl. Microbiol. Biotechnol.
48
735-737
1997
-
-
-
-
-
-
-
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1
-
1
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2
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1
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2
-
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-
-
-
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-
-
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637028
Rius
-
Induction of L-lysine epsilon- ...
Streptomyces clavuligerus
FEMS Microbiol. Lett.
146
319
1997
-
-
-
-
-
-
-
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1
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1
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1
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637031
Romero
Partial purification, characte ...
Streptomyces clavuligerus
J. Ind. Microbiol. Biotechnol.
18
241-246
1997
-
-
-
-
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1
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2
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1
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4
-
1
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1
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1
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1
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4
-
1
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1
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-
-
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-
637027
Malmberg
Effects of enhanced lysine eps ...
Streptomyces clavuligerus, Streptomyces clavuligerus NRRL 3585
Appl. Microbiol. Biotechnol.
44
198-205
1995
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5
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637023
Hammer
Purification and characterizat ...
Cyberlindnera jadinii
J. Basic Microbiol.
32
21-27
1992
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7
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637024
Yagi
Characterization of the half a ...
Flavobacterium lutescens
J. Biochem.
109
61-65
1991
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10
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637019
Tanizawa
L-Lysine transaminase from Fla ...
Flavobacterium lutescens
Methods Enzymol.
113
96-102
1985
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637020
Yoshimura
The effect of carboxylates and ...
Flavobacterium lutescens
J. Biochem.
95
559-565
1984
6
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8
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637021
Yagi
L-Lysine: 2-oxoglutarate 6-ami ...
Flavobacterium lutescens
J. Biochem.
87
1395-1402
1980
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637022
Yagi
A novel purification procedure ...
Flavobacterium lutescens
Biochim. Biophys. Acta
614
63-70
1980
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637018
Soda
-
L-Lysine-ketoglutarate aminotr ...
Flavobacterium lutescens
Methods Enzymol.
17B
222-228
1971
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1
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3
6
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13
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13
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637016
Soda
L-Lysine:alpha-ketoglutarate a ...
Flavobacterium fuscum
Biochemistry
7
4102-4109
1968
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637017
Soda
L-Lysine:alpha-ketoglutarate a ...
Flavobacterium lutescens
Biochemistry
7
4110-4119
1968
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4
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