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Literature summary for 2.4.2.6 extracted from

  • Fernandez-Lucas, J.; Condezo, L.A.; Martinez-Lagos, F.; Sinisterra, J.V.
    Synthesis of 2-deoxyibosylnucleosides using new 2-deoxyribosyltransferase microorganism producers (2007), Enzyme Microb. Technol., 40, 1147-1155.
No PubMed abstract available

Application

Application Comment Organism
synthesis useful as biocatalyst, immobilization on calcium alginate or calcium pectate of the enzyme increases the 2'-deoxynucleoside synthesis effiency of the organism Weizmannia coagulans
synthesis useful as biocatalyst, immobilization on calcium alginate or calcium pectate of the enzyme increases the 2'-deoxynucleoside synthesis effiency of the organism Lactobacillus sp.
synthesis useful as biocatalyst, immobilization on calcium alginate or calcium pectate of the enzyme increases the 2'-deoxynucleoside synthesis effiency of the organism Psychrobacter immobilis
synthesis useful as biocatalyst, immobilization on calcium alginate or calcium pectate of the enzyme increases the 2'-deoxynucleoside synthesis effiency of the organism Peribacillus psychrosaccharolyticus

Protein Variants

Protein Variants Comment Organism
additional information immobilization on calcium alginate or calcium pectate of the enzyme increases the 2'-deoxynucleoside synthesis effiency of the organism, method optimization, overview Weizmannia coagulans
additional information immobilization on calcium alginate or calcium pectate of the enzyme increases the 2'-deoxynucleoside synthesis effiency of the organism, method optimization, overview Lactobacillus sp.
additional information immobilization on calcium alginate or calcium pectate of the enzyme increases the 2'-deoxynucleoside synthesis effiency of the organism, method optimization, overview Psychrobacter immobilis
additional information immobilization on calcium alginate or calcium pectate of the enzyme increases the 2'-deoxynucleoside synthesis effiency of the organism, method optimization, overview Peribacillus psychrosaccharolyticus

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
2'-deoxy-D-ribosyl-uracil + adenine Weizmannia coagulans
-
2'-deoxy-D-ribosyl-adenine + uracil
-
r
2'-deoxy-D-ribosyl-uracil + adenine Lactobacillus sp.
-
2'-deoxy-D-ribosyl-adenine + uracil
-
r
2'-deoxy-D-ribosyl-uracil + adenine Psychrobacter immobilis
-
2'-deoxy-D-ribosyl-adenine + uracil
-
r
2'-deoxy-D-ribosyl-uracil + adenine Peribacillus psychrosaccharolyticus
-
2'-deoxy-D-ribosyl-adenine + uracil
-
r
2'-deoxy-D-ribosyl-uracil + adenine Weizmannia coagulans CECT 12
-
2'-deoxy-D-ribosyl-adenine + uracil
-
r
2'-deoxy-D-ribosyl-uracil + adenine Lactobacillus sp. CECT 4219
-
2'-deoxy-D-ribosyl-adenine + uracil
-
r
2'-deoxy-D-ribosyl-uracil + adenine Peribacillus psychrosaccharolyticus CECT 4074
-
2'-deoxy-D-ribosyl-adenine + uracil
-
r
2'-deoxy-D-ribosyl-uracil + adenine Psychrobacter immobilis CECT 4492
-
2'-deoxy-D-ribosyl-adenine + uracil
-
r

Organism

Organism UniProt Comment Textmining
Lactobacillus sp.
-
-
-
Lactobacillus sp. CECT 4219
-
-
-
Peribacillus psychrosaccharolyticus
-
-
-
Peribacillus psychrosaccharolyticus CECT 4074
-
-
-
Psychrobacter immobilis
-
-
-
Psychrobacter immobilis CECT 4492
-
-
-
Weizmannia coagulans
-
-
-
Weizmannia coagulans CECT 12
-
-
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
2'-deoxy-D-ribosyl-uracil + adenine
-
Weizmannia coagulans 2'-deoxy-D-ribosyl-adenine + uracil
-
r
2'-deoxy-D-ribosyl-uracil + adenine
-
Lactobacillus sp. 2'-deoxy-D-ribosyl-adenine + uracil
-
r
2'-deoxy-D-ribosyl-uracil + adenine
-
Psychrobacter immobilis 2'-deoxy-D-ribosyl-adenine + uracil
-
r
2'-deoxy-D-ribosyl-uracil + adenine
-
Peribacillus psychrosaccharolyticus 2'-deoxy-D-ribosyl-adenine + uracil
-
r
2'-deoxy-D-ribosyl-uracil + adenine
-
Weizmannia coagulans CECT 12 2'-deoxy-D-ribosyl-adenine + uracil
-
r
2'-deoxy-D-ribosyl-uracil + adenine
-
Lactobacillus sp. CECT 4219 2'-deoxy-D-ribosyl-adenine + uracil
-
r
2'-deoxy-D-ribosyl-uracil + adenine
-
Peribacillus psychrosaccharolyticus CECT 4074 2'-deoxy-D-ribosyl-adenine + uracil
-
r
2'-deoxy-D-ribosyl-uracil + adenine
-
Psychrobacter immobilis CECT 4492 2'-deoxy-D-ribosyl-adenine + uracil
-
r
2'-deoxyadenosine + 5-chlorouracil
-
Weizmannia coagulans 2'-deoxy-D-ribosyl-5-chlorouracil + adenine
-
r
2'-deoxyadenosine + 5-chlorouracil
-
Lactobacillus sp. 2'-deoxy-D-ribosyl-5-chlorouracil + adenine
-
r
2'-deoxyadenosine + 5-chlorouracil
-
Psychrobacter immobilis 2'-deoxy-D-ribosyl-5-chlorouracil + adenine
-
r
2'-deoxyadenosine + 5-chlorouracil
-
Peribacillus psychrosaccharolyticus 2'-deoxy-D-ribosyl-5-chlorouracil + adenine
-
r
2'-deoxyadenosine + 5-chlorouracil
-
Weizmannia coagulans CECT 12 2'-deoxy-D-ribosyl-5-chlorouracil + adenine
-
r
2'-deoxyadenosine + 5-chlorouracil
-
Lactobacillus sp. CECT 4219 2'-deoxy-D-ribosyl-5-chlorouracil + adenine
-
r
2'-deoxyadenosine + 5-chlorouracil
-
Peribacillus psychrosaccharolyticus CECT 4074 2'-deoxy-D-ribosyl-5-chlorouracil + adenine
-
r
2'-deoxyadenosine + 5-chlorouracil
-
Psychrobacter immobilis CECT 4492 2'-deoxy-D-ribosyl-5-chlorouracil + adenine
-
r
2'-deoxyadenosine + 5-fluorouracil
-
Weizmannia coagulans 2'-deoxy-5-fluorouridine + adenine
-
r
2'-deoxyadenosine + 5-fluorouracil
-
Lactobacillus sp. 2'-deoxy-5-fluorouridine + adenine
-
r
2'-deoxyadenosine + 5-fluorouracil
-
Psychrobacter immobilis 2'-deoxy-5-fluorouridine + adenine
-
r
2'-deoxyadenosine + 5-fluorouracil
-
Peribacillus psychrosaccharolyticus 2'-deoxy-5-fluorouridine + adenine
-
r
2'-deoxyadenosine + 5-fluorouracil
-
Weizmannia coagulans CECT 12 2'-deoxy-5-fluorouridine + adenine
-
r
2'-deoxyadenosine + 5-fluorouracil
-
Lactobacillus sp. CECT 4219 2'-deoxy-5-fluorouridine + adenine
-
r
2'-deoxyadenosine + 5-fluorouracil
-
Peribacillus psychrosaccharolyticus CECT 4074 2'-deoxy-5-fluorouridine + adenine
-
r
2'-deoxyadenosine + 5-fluorouracil
-
Psychrobacter immobilis CECT 4492 2'-deoxy-5-fluorouridine + adenine
-
r
additional information the enzyme is selective for 6-aminopurine compared to 6-oxopurines and for 2'-deoxyuridine compared to thymidine Weizmannia coagulans ?
-
?
additional information the enzyme is selective for 6-aminopurine compared to 6-oxopurines and for 2'-deoxyuridine compared to thymidine Lactobacillus sp. ?
-
?
additional information the enzyme is selective for 6-aminopurine compared to 6-oxopurines and for 2'-deoxyuridine compared to thymidine Psychrobacter immobilis ?
-
?
additional information the enzyme is selective for 6-aminopurine compared to 6-oxopurines and for 2'-deoxyuridine compared to thymidine Peribacillus psychrosaccharolyticus ?
-
?
additional information the enzyme is selective for 6-aminopurine compared to 6-oxopurines and for 2'-deoxyuridine compared to thymidine Weizmannia coagulans CECT 12 ?
-
?
additional information the enzyme is selective for 6-aminopurine compared to 6-oxopurines and for 2'-deoxyuridine compared to thymidine Lactobacillus sp. CECT 4219 ?
-
?
additional information the enzyme is selective for 6-aminopurine compared to 6-oxopurines and for 2'-deoxyuridine compared to thymidine Peribacillus psychrosaccharolyticus CECT 4074 ?
-
?
additional information the enzyme is selective for 6-aminopurine compared to 6-oxopurines and for 2'-deoxyuridine compared to thymidine Psychrobacter immobilis CECT 4492 ?
-
?
thymidine + adenine
-
Weizmannia coagulans 2'-deoxy-D-ribosyl-adenine + thymine
-
r
thymidine + adenine
-
Lactobacillus sp. 2'-deoxy-D-ribosyl-adenine + thymine
-
r
thymidine + adenine
-
Psychrobacter immobilis 2'-deoxy-D-ribosyl-adenine + thymine
-
r
thymidine + adenine
-
Peribacillus psychrosaccharolyticus 2'-deoxy-D-ribosyl-adenine + thymine
-
r
thymidine + adenine
-
Weizmannia coagulans CECT 12 2'-deoxy-D-ribosyl-adenine + thymine
-
r
thymidine + adenine
-
Lactobacillus sp. CECT 4219 2'-deoxy-D-ribosyl-adenine + thymine
-
r
thymidine + adenine
-
Peribacillus psychrosaccharolyticus CECT 4074 2'-deoxy-D-ribosyl-adenine + thymine
-
r
thymidine + adenine
-
Psychrobacter immobilis CECT 4492 2'-deoxy-D-ribosyl-adenine + thymine
-
r

Synonyms

Synonyms Comment Organism
nucleoside 2'-deoxyribosyltransferase type II
-
Weizmannia coagulans
nucleoside 2'-deoxyribosyltransferase type II
-
Lactobacillus sp.
nucleoside 2'-deoxyribosyltransferase type II
-
Psychrobacter immobilis
nucleoside 2'-deoxyribosyltransferase type II
-
Peribacillus psychrosaccharolyticus

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
57
-
assay at Weizmannia coagulans
57
-
assay at Lactobacillus sp.
57
-
assay at Psychrobacter immobilis
57
-
assay at Peribacillus psychrosaccharolyticus

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7
-
assay at Weizmannia coagulans
7
-
assay at Lactobacillus sp.
7
-
assay at Psychrobacter immobilis
7
-
assay at Peribacillus psychrosaccharolyticus