BRENDA - Enzyme Database
show all sequences of 1.8.5.6

Sulfite oxidation in the purple sulfur bacterium Allochromatium vinosum: Identification of SoeABC as a major player and relevance of SoxYZ in the process

Dahl, C.; Franz, B.; Hensen, D.; Kesselheim, A.; Zigann, R.; Microbiology 159, 2626-2638 (2013)

Data extracted from this reference:

Localization
Localization
Commentary
Organism
GeneOntology No.
Textmining
cytoplasm
subunits SoeA and SoeB are located in the cytoplasm and attached to the cytoplasmic membrane by interaction with subunit SoeC
Allochromatium vinosum
5737
-
Organism
Organism
UniProt
Commentary
Textmining
Allochromatium vinosum
D3RNN8 and D3RNN7 and D3RNN6
D3RNN8 i.e. subunit SoeA, D3RNN7 i.e. subunit SoeB, D3RNN6 i.e. subunit SoeC
-
Allochromatium vinosum DSM 180
D3RNN8 and D3RNN7 and D3RNN6
D3RNN8 i.e. subunit SoeA, D3RNN7 i.e. subunit SoeB, D3RNN6 i.e. subunit SoeC
-
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
Substrate Product ID
sulfite + ferricyanide
-
739014
Allochromatium vinosum
sulfate + ferrocyanide
-
-
-
?
sulfite + ferricyanide
-
739014
Allochromatium vinosum DSM 180
sulfate + ferrocyanide
-
-
-
?
Subunits
Subunits
Commentary
Organism
?
x * 108950, molybdoprotein SoeA carrying one [Fe4S4] cluster at the N-terminus, x * 26995, iron-sulfur protein SoeB, predicted to bind four [Fe4S4] clusters, and x * 35715, NrfD/PsrC-like membrane protein SoeC with eight transmembrane helices
Allochromatium vinosum
Synonyms
Synonyms
Commentary
Organism
Alvin_2489
-
Allochromatium vinosum
Alvin_2490
-
Allochromatium vinosum
Alvin_2491
-
Allochromatium vinosum
SoeABC
-
Allochromatium vinosum
Localization (protein specific)
Localization
Commentary
Organism
GeneOntology No.
Textmining
cytoplasm
subunits SoeA and SoeB are located in the cytoplasm and attached to the cytoplasmic membrane by interaction with subunit SoeC
Allochromatium vinosum
5737
-
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
ID
sulfite + ferricyanide
-
739014
Allochromatium vinosum
sulfate + ferrocyanide
-
-
-
?
sulfite + ferricyanide
-
739014
Allochromatium vinosum DSM 180
sulfate + ferrocyanide
-
-
-
?
Subunits (protein specific)
Subunits
Commentary
Organism
?
x * 108950, molybdoprotein SoeA carrying one [Fe4S4] cluster at the N-terminus, x * 26995, iron-sulfur protein SoeB, predicted to bind four [Fe4S4] clusters, and x * 35715, NrfD/PsrC-like membrane protein SoeC with eight transmembrane helices
Allochromatium vinosum
Expression
Organism
Commentary
Expression
Allochromatium vinosum
transcription of all SoeABC genes is about 3fold increased during photolithoautotrophic growth on sulfide or thiosulfate compared to photo organoheterotrophic growth on malate
up
General Information
General Information
Commentary
Organism
physiological function
SoeABC is the major sulfite-oxidizing enzyme in Allochromatium vinosum. The periplasmic sulfur substrate-binding protein SoxYZ is needed in parallel to the cytoplasmic enzymes for effective sulfite oxidation. A SoeABC-deficient mutant displays about 17% of wild-type sulifte oxidation. A knockout of both adenosine-5'-phosphosulfate reductase gene aprB and soeA leads to an additive effect with a residual specific rate of sulfite oxidation for whole cells of only 7%
Allochromatium vinosum
General Information (protein specific)
General Information
Commentary
Organism
physiological function
SoeABC is the major sulfite-oxidizing enzyme in Allochromatium vinosum. The periplasmic sulfur substrate-binding protein SoxYZ is needed in parallel to the cytoplasmic enzymes for effective sulfite oxidation. A SoeABC-deficient mutant displays about 17% of wild-type sulifte oxidation. A knockout of both adenosine-5'-phosphosulfate reductase gene aprB and soeA leads to an additive effect with a residual specific rate of sulfite oxidation for whole cells of only 7%
Allochromatium vinosum
Expression (protein specific)
Organism
Commentary
Expression
Allochromatium vinosum
transcription of all SoeABC genes is about 3fold increased during photolithoautotrophic growth on sulfide or thiosulfate compared to photo organoheterotrophic growth on malate
up
Other publictions for EC 1.8.5.6
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Synonyms
Temperature Optimum [°C]
Temperature Range [°C]
Temperature Stability [°C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [°C] (protein specific)
Temperature Range [°C] (protein specific)
Temperature Stability [°C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
739014
Dahl
Sulfite oxidation in the purpl ...
Allochromatium vinosum, Allochromatium vinosum DSM 180
Microbiology
159
2626-2638
2013
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739009
Chan
A genomic region required for ...
Chlorobaculum tepidum, Chlorobaculum tepidum DSM 12025
Microbiology
154
818-829
2008
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