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Literature summary for 1.3.99.28 extracted from
- Heterologous carotenoid-biosynthetic enzymes: functional complementation and effects on carotenoid profiles in Escherichia coli (2013), Appl. Environ. Microbiol., 79, 610-618.
Cloned(Commentary)
| Cloned (Comment) | Organism |
|---|---|
| gene crtI, phylogenetic tree, co-expression with 5 other enzymes of the carotenoid pathway from Pantoea agglomerans, i.e. IPP isomerase, FPP synthase, GGPP synthase, phytoene synthase, lycopene cyclase, beta-carotene hydrolase, and zeaxanthin glucosyltransferase, in Escherichia coli, functional complementation by CrtI of Brevibacterium linens, CGI, CrtI of Corynebacterium glutamicum, RSI, CrtI of Rhodobacter sphaeroides RCI, CrtI of Rhodobacter capsulatus, and RBI, CrtI of Rhodopirellula baltica, and the homologous complementation of CrtI from Pantoea agglomerans with the Pantoea agglomerans carotenogenic module expressing CrtEPAG -CrtBPAG | Cereibacter sphaeroides |
| gene crtI, phylogenetic tree, co-expression with 5 other enzymes of the carotenoid pathway from Pantoea agglomerans, i.e. IPP isomerase, FPP synthase, GGPP synthase, phytoene synthase, lycopene cyclase, beta-carotene hydrolase, and zeaxanthin glucosyltransferase, in Escherichia coli, functional complementation by CrtI of Brevibacterium linens, CGI, CrtI of Corynebacterium glutamicum, RSI, CrtI of Rhodobacter sphaeroides RCI, CrtI of Rhodobacter capsulatus, and RBI, CrtI of Rhodopirellula baltica, and the homologous complementation of CrtI from Pantoea agglomerans with the Pantoea agglomerans carotenogenic module expressing CrtEPAG -CrtBPAG | Brevibacterium linens |
| gene crtI, phylogenetic tree, co-expression with 5 other enzymes of the carotenoid pathway from Pantoea agglomerans, i.e. IPP isomerase, FPP synthase, GGPP synthase, phytoene synthase, lycopene cyclase, beta-carotene hydrolase, and zeaxanthin glucosyltransferase, in Escherichia coli, functional complementation by CrtI of Brevibacterium linens, CGI, CrtI of Corynebacterium glutamicum, RSI, CrtI of Rhodobacter sphaeroides RCI, CrtI of Rhodobacter capsulatus, and RBI, CrtI of Rhodopirellula baltica, and the homologous complementation of CrtI from Pantoea agglomerans with the Pantoea agglomerans carotenogenic module expressing CrtEPAG -CrtBPAG | Rhodobacter capsulatus |
| gene crtI, phylogenetic tree, co-expression with 5 other enzymes of the carotenoid pathway from Pantoea agglomerans, i.e. IPP isomerase, FPP synthase, GGPP synthase, phytoene synthase, lycopene cyclase, beta-carotene hydrolase, and zeaxanthin glucosyltransferase, in Escherichia coli, functional complementation by CrtI of Brevibacterium linens, CGI, CrtI of Corynebacterium glutamicum, RSI, CrtI of Rhodobacter sphaeroides RCI, CrtI of Rhodobacter capsulatus, and RBI, CrtI of Rhodopirellula baltica, and the homologous complementation of CrtI from Pantoea agglomerans with the Pantoea agglomerans carotenogenic module expressing CrtEPAG -CrtBPAG | Corynebacterium glutamicum |
| gene crtI, phylogenetic tree, co-expression with 5 other enzymes of the carotenoid pathway from Pantoea agglomerans, i.e. IPP isomerase, FPP synthase, GGPP synthase, phytoene synthase, lycopene cyclase, beta-carotene hydrolase, and zeaxanthin glucosyltransferase, in Escherichia coli, functional complementation by CrtI of Brevibacterium linens, CGI, CrtI of Corynebacterium glutamicum, RSI, CrtI of Rhodobacter sphaeroides RCI, CrtI of Rhodobacter capsulatus, and RBI, CrtI of Rhodopirellula baltica, and the homologous complementation of CrtI from Pantoea agglomerans with the Pantoea agglomerans carotenogenic module expressing CrtEPAG -CrtBPAG | Rhodopirellula baltica |
| gene crtI, phylogenetic tree, co-expression with 5 other enzymes of the carotenoid pathway from Pantoea agglomerans, i.e. IPP isomerase, FPP synthase, GGPP synthase, phytoene synthase, lycopene cyclase, beta-carotene hydrolase, and zeaxanthin glucosyltransferase, in Escherichia coli, functional complementation by CrtI of Brevibacterium linens, CGI, CrtI of Corynebacterium glutamicum, RSI, CrtI of Rhodobacter sphaeroides RCI, CrtI of Rhodobacter capsulatus, and RBI, CrtI of Rhodopirellula baltica, and the homologous complementation of CrtI from Pantoea agglomerans with the Pantoea agglomerans carotenogenic module expressing CrtEPAG -CrtBPAG | Pantoea agglomerans |
Protein Variants
| Protein Variants | Comment | Organism |
|---|---|---|
| additional information | functional complementation of heterogeneous phytoene desaturases (CrtIs) from 5 carotenogenic microorganisms, overview | Cereibacter sphaeroides |
| additional information | functional complementation of heterogeneous phytoene desaturases (CrtIs) from 5 carotenogenic microorganisms, overview | Brevibacterium linens |
| additional information | functional complementation of heterogeneous phytoene desaturases (CrtIs) from 5 carotenogenic microorganisms, overview | Rhodobacter capsulatus |
| additional information | functional complementation of heterogeneous phytoene desaturases (CrtIs) from 5 carotenogenic microorganisms, overview | Corynebacterium glutamicum |
| additional information | functional complementation of heterogeneous phytoene desaturases (CrtIs) from 5 carotenogenic microorganisms, overview | Rhodopirellula baltica |
| additional information | functional complementation of heterogeneous phytoene desaturases (CrtIs) from 5 carotenogenic microorganisms, overview | Pantoea agglomerans |
Natural Substrates/ Products (Substrates)
| Natural Substrates | Organism | Comment (Nat. Sub.) | Natural Products | Comment (Nat. Pro.) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| 15-cis-phytoene + acceptor | Cereibacter sphaeroides | - |
all-trans-zeta-carotene + reduced acceptor | - |
? |  |
| 15-cis-phytoene + acceptor | Brevibacterium linens | - |
all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | Rhodobacter capsulatus | - |
all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | Corynebacterium glutamicum | - |
all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | Rhodopirellula baltica | - |
all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | Pantoea agglomerans | - |
all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | Rhodopirellula baltica DSM 10527 | - |
all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | Rhodobacter capsulatus KCTC 2583 | - |
all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | Cereibacter sphaeroides KCTC 12085 | - |
all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | Corynebacterium glutamicum KCTC 1445 | - |
all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | Pantoea agglomerans KCTC 2479 | - |
all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | Brevibacterium linens DSM 20426 | - |
all-trans-zeta-carotene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | Cereibacter sphaeroides | - |
all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | Brevibacterium linens | - |
all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | Rhodobacter capsulatus | - |
all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | Corynebacterium glutamicum | - |
all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | Rhodopirellula baltica | - |
all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | Pantoea agglomerans | - |
all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | Rhodopirellula baltica DSM 10527 | - |
all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | Rhodobacter capsulatus KCTC 2583 | - |
all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | Cereibacter sphaeroides KCTC 12085 | - |
all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | Corynebacterium glutamicum KCTC 1445 | - |
all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | Pantoea agglomerans KCTC 2479 | - |
all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | Brevibacterium linens DSM 20426 | - |
all-trans-neurosporene + reduced acceptor | - |
? | |
Organism
| Organism | UniProt | Comment | Textmining |
|---|---|---|---|
| Brevibacterium linens | - |
- |
- |
| Brevibacterium linens DSM 20426 | - |
- |
- |
| Cereibacter sphaeroides | - |
- |
- |
| Cereibacter sphaeroides KCTC 12085 | - |
- |
- |
| Corynebacterium glutamicum | - |
- |
- |
| Corynebacterium glutamicum KCTC 1445 | - |
- |
- |
| Pantoea agglomerans | K7WPN7 | - |
- |
| Pantoea agglomerans KCTC 2479 | K7WPN7 | - |
- |
| Rhodobacter capsulatus | - |
- |
- |
| Rhodobacter capsulatus KCTC 2583 | - |
- |
- |
| Rhodopirellula baltica | - |
- |
- |
| Rhodopirellula baltica DSM 10527 | - |
- |
- |
Substrates and Products (Substrate)
| Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
|---|---|---|---|---|---|---|
| 15-cis-phytoene + acceptor | - |
Cereibacter sphaeroides | all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | - |
Brevibacterium linens | all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | - |
Rhodobacter capsulatus | all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | - |
Corynebacterium glutamicum | all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | - |
Rhodopirellula baltica | all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | - |
Pantoea agglomerans | all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | - |
Rhodopirellula baltica DSM 10527 | all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | - |
Rhodobacter capsulatus KCTC 2583 | all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | - |
Cereibacter sphaeroides KCTC 12085 | all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | - |
Corynebacterium glutamicum KCTC 1445 | all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | - |
Pantoea agglomerans KCTC 2479 | all-trans-zeta-carotene + reduced acceptor | - |
? | |
| 15-cis-phytoene + acceptor | - |
Brevibacterium linens DSM 20426 | all-trans-zeta-carotene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | - |
Cereibacter sphaeroides | all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | - |
Brevibacterium linens | all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | - |
Rhodobacter capsulatus | all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | - |
Corynebacterium glutamicum | all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | - |
Rhodopirellula baltica | all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | - |
Pantoea agglomerans | all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | - |
Rhodopirellula baltica DSM 10527 | all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | - |
Rhodobacter capsulatus KCTC 2583 | all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | - |
Cereibacter sphaeroides KCTC 12085 | all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | - |
Corynebacterium glutamicum KCTC 1445 | all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | - |
Pantoea agglomerans KCTC 2479 | all-trans-neurosporene + reduced acceptor | - |
? | |
| all-trans-zeta-carotene + acceptor | - |
Brevibacterium linens DSM 20426 | all-trans-neurosporene + reduced acceptor | - |
? | |
Synonyms
| Synonyms | Comment | Organism |
|---|---|---|
| phytoene desaturase | - |
Cereibacter sphaeroides |
| phytoene desaturase | - |
Brevibacterium linens |
| phytoene desaturase | - |
Rhodobacter capsulatus |
| phytoene desaturase | - |
Corynebacterium glutamicum |
| phytoene desaturase | - |
Rhodopirellula baltica |
| phytoene desaturase | - |
Pantoea agglomerans |
General Information
| General Information | Comment | Organism |
|---|---|---|
| evolution | homologous complementation of CrtI from Pantoea agglomerans with the Pantoea agglomerans carotenogenic module expressing CrtEPAG -CrtBPAG | Pantoea agglomerans |
| evolution | homologous complementation of CrtI from Pantoea agglomerans with the Pantoea agglomerans carotenogenic module expressing CrtEPAG-CrtBPAG | Cereibacter sphaeroides |
| evolution | homologous complementation of CrtI from Pantoea agglomerans with the Pantoea agglomerans carotenogenic module expressing CrtEPAG-CrtBPAG | Brevibacterium linens |
| evolution | homologous complementation of CrtI from Pantoea agglomerans with the Pantoea agglomerans carotenogenic module expressing CrtEPAG-CrtBPAG | Rhodobacter capsulatus |
| evolution | homologous complementation of CrtI from Pantoea agglomerans with the Pantoea agglomerans carotenogenic module expressing CrtEPAG-CrtBPAG | Corynebacterium glutamicum |
| evolution | homologous complementation of CrtI from Pantoea agglomerans with the Pantoea agglomerans carotenogenic module expressing CrtEPAG-CrtBPAG | Rhodopirellula baltica |
| metabolism | the enzyme is a pathway branch point enzyme in the carotenoid pathway | Cereibacter sphaeroides |
| metabolism | the enzyme is a pathway branch point enzyme in the carotenoid pathway | Brevibacterium linens |
| metabolism | the enzyme is a pathway branch point enzyme in the carotenoid pathway | Rhodobacter capsulatus |
| metabolism | the enzyme is a pathway branch point enzyme in the carotenoid pathway | Corynebacterium glutamicum |
| metabolism | the enzyme is a pathway branch point enzyme in the carotenoid pathway | Rhodopirellula baltica |
| metabolism | the enzyme is a pathway branch point enzyme in the carotenoid pathway. Carotenoid pathways of Pantoea agglomerans wild-type and reconstructed pathways in Escherichia coli, overview | Pantoea agglomerans |
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