BRENDA - Enzyme Database show
show all sequences of 1.3.7.8

Substrate binding and reduction of benzoyl-CoA reductase: evidence for nucleotide-dependent conformational changes

Mobitz, H.; Friedrich, T.; Boll, M.; Biochemistry 43, 1376-1385 (2004)

Data extracted from this reference:

Inhibitors
Inhibitors
Commentary
Organism
Structure
4-fluoro-benzoyl-CoA
-
Thauera aromatica
KM Value [mM]
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
additional information
-
additional information
detailed kinetic analysis
Thauera aromatica
0.019
-
2-amino-benzoyl-CoA
-
Thauera aromatica
0.037
-
benzoyl-CoA
-
Thauera aromatica
0.043
-
3-fluoro-benzoyl-CoA
-
Thauera aromatica
0.056
-
2-hydroxy-benzoyl-CoA
-
Thauera aromatica
0.066
-
2-chloro-benzoyl-CoA
-
Thauera aromatica
0.094
-
thiophene-2-carbonyl-CoA
-
Thauera aromatica
0.152
-
2-fluoro-benzoyl-CoA
-
Thauera aromatica
0.375
-
pyridine-2-carbonyl-CoA
-
Thauera aromatica
0.625
-
pyridine-4-carbonyl-CoA
-
Thauera aromatica
2.5
-
furan-2-carbonyl-CoA
-
Thauera aromatica
Organism
Organism
Primary Accession No. (UniProt)
Commentary
Textmining
Thauera aromatica
-
-
-
Reaction
Reaction
Commentary
Organism
cyclohexa-1,5-diene-1-carbonyl-CoA + oxidized ferredoxin + 2 ADP + 2 phosphate = benzoyl-CoA + reduced ferredoxin + 2 ATP + 2 H2O
ATP-binding switch is rather fast, reverse switch back of MgADP-bound enzyme is considered rate-limiting, binding of nucleotides does not affect redox potential of 4Fe-4S clusters; Birch-like mechanism
Thauera aromatica
Substrates and Products (Substrate)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
2-amino-benzoyl-CoA + reduced methyl viologen + ATP
at 11% of the velocity of benzoyl-CoA
654733
Thauera aromatica
2-amino-cyclohexa-1,5-diene-1-carbonyl-CoA + methyl viologen + ADP + phosphate
-
-
-
?
2-chloro-benzoyl-CoA + reduced methyl viologen + ATP
at 106% of the velocity of benzoyl-CoA
654733
Thauera aromatica
2-chloro-cyclohexa-1,5-diene-1-carbonyl-CoA + methyl viologen + ADP + phosphate
-
-
-
?
2-fluoro-benzoyl-CoA + reduced methyl viologen + ATP
at 145% of the velocity of benzoyl-CoA
654733
Thauera aromatica
2-fluoro-cyclohexa-1,5-diene-1-carbonyl-CoA + methyl viologen + ADP + phosphate
-
-
-
?
2-hydroxy-benzoyl-CoA + reduced methyl viologen + ATP
at 64% of the velocity of benzoyl-CoA
654733
Thauera aromatica
2-hydroxy-cyclohexa-1,5-diene-1-carbonyl-CoA + methyl viologen + ADP + phosphate
-
-
-
?
3-fluoro-benzoyl-CoA + reduced methyl viologen + ATP
at 31% of the velocity of benzoyl-CoA
654733
Thauera aromatica
3-fluoro-cyclohexa-1,5-diene-1-carbonyl-CoA + methyl viologen + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced methyl viologen + ATP
-
654733
Thauera aromatica
cyclohexa-1,5-diene-1-carbonyl-CoA + methyl viologen + ADP + phosphate
-
-
-
?
furan-2-carbonyl-CoA + reduced methyl viologen + ATP
at 28% of the velocity of benzoyl-CoA
654733
Thauera aromatica
? + methyl viologen + ADP + phosphate
-
-
-
?
additional information
no substrate: furan-3-carbonyl-CoA, pyrrole-2-carbonyl-CoA, pyridine-4-carbonyl-CoA, 4-fluoro-benzoyl-CoA
654733
Thauera aromatica
?
-
-
-
-
pyridine-2-carbonyl-CoA + reduced methyl viologen + ATP
at 67% of the velocity of benzoyl-CoA
654733
Thauera aromatica
? + methyl viologen + ADP + phosphate
-
-
-
?
pyridine-4-carbonyl-CoA + reduced methyl viologen + ATP
at 41% of the velocity of benzoyl-CoA
654733
Thauera aromatica
? + methyl viologen + ADP + phosphate
-
-
-
?
thiophene-2-carbonyl-CoA + reduced methyl viologen + ATP
at 144% of the velocity of benzoyl-CoA
654733
Thauera aromatica
? + methyl viologen + ADP + phosphate
-
-
-
?
thiophene-3-carbonyl-CoA + reduced methyl viologen + ATP
at 10% of the velocity of benzoyl-CoA
654733
Thauera aromatica
? + methyl viologen + ADP + phosphate
-
-
-
?
pH Optimum
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
7
-
-
Thauera aromatica
pH Range
pH Minimum
pH Maximum
Commentary
Organism
6.5
8
-
Thauera aromatica
Ki Value [mM]
Ki Value [mM]
Ki Value maximum [mM]
Inhibitor
Commentary
Organism
Structure
0.54
-
4-fluoro-benzoyl-CoA
-
Thauera aromatica
Inhibitors (protein specific)
Inhibitors
Commentary
Organism
Structure
4-fluoro-benzoyl-CoA
-
Thauera aromatica
Ki Value [mM] (protein specific)
Ki Value [mM]
Ki Value maximum [mM]
Inhibitor
Commentary
Organism
Structure
0.54
-
4-fluoro-benzoyl-CoA
-
Thauera aromatica
KM Value [mM] (protein specific)
KM Value [mM]
KM Value Maximum [mM]
Substrate
Commentary
Organism
Structure
additional information
-
additional information
detailed kinetic analysis
Thauera aromatica
0.019
-
2-amino-benzoyl-CoA
-
Thauera aromatica
0.037
-
benzoyl-CoA
-
Thauera aromatica
0.043
-
3-fluoro-benzoyl-CoA
-
Thauera aromatica
0.056
-
2-hydroxy-benzoyl-CoA
-
Thauera aromatica
0.066
-
2-chloro-benzoyl-CoA
-
Thauera aromatica
0.094
-
thiophene-2-carbonyl-CoA
-
Thauera aromatica
0.152
-
2-fluoro-benzoyl-CoA
-
Thauera aromatica
0.375
-
pyridine-2-carbonyl-CoA
-
Thauera aromatica
0.625
-
pyridine-4-carbonyl-CoA
-
Thauera aromatica
2.5
-
furan-2-carbonyl-CoA
-
Thauera aromatica
Substrates and Products (Substrate) (protein specific)
Substrates
Commentary Substrates
Literature (Substrates)
Organism
Products
Commentary (Products)
Literature (Products)
Organism (Products)
Reversibility
2-amino-benzoyl-CoA + reduced methyl viologen + ATP
at 11% of the velocity of benzoyl-CoA
654733
Thauera aromatica
2-amino-cyclohexa-1,5-diene-1-carbonyl-CoA + methyl viologen + ADP + phosphate
-
-
-
?
2-chloro-benzoyl-CoA + reduced methyl viologen + ATP
at 106% of the velocity of benzoyl-CoA
654733
Thauera aromatica
2-chloro-cyclohexa-1,5-diene-1-carbonyl-CoA + methyl viologen + ADP + phosphate
-
-
-
?
2-fluoro-benzoyl-CoA + reduced methyl viologen + ATP
at 145% of the velocity of benzoyl-CoA
654733
Thauera aromatica
2-fluoro-cyclohexa-1,5-diene-1-carbonyl-CoA + methyl viologen + ADP + phosphate
-
-
-
?
2-hydroxy-benzoyl-CoA + reduced methyl viologen + ATP
at 64% of the velocity of benzoyl-CoA
654733
Thauera aromatica
2-hydroxy-cyclohexa-1,5-diene-1-carbonyl-CoA + methyl viologen + ADP + phosphate
-
-
-
?
3-fluoro-benzoyl-CoA + reduced methyl viologen + ATP
at 31% of the velocity of benzoyl-CoA
654733
Thauera aromatica
3-fluoro-cyclohexa-1,5-diene-1-carbonyl-CoA + methyl viologen + ADP + phosphate
-
-
-
?
benzoyl-CoA + reduced methyl viologen + ATP
-
654733
Thauera aromatica
cyclohexa-1,5-diene-1-carbonyl-CoA + methyl viologen + ADP + phosphate
-
-
-
?
furan-2-carbonyl-CoA + reduced methyl viologen + ATP
at 28% of the velocity of benzoyl-CoA
654733
Thauera aromatica
? + methyl viologen + ADP + phosphate
-
-
-
?
additional information
no substrate: furan-3-carbonyl-CoA, pyrrole-2-carbonyl-CoA, pyridine-4-carbonyl-CoA, 4-fluoro-benzoyl-CoA
654733
Thauera aromatica
?
-
-
-
-
pyridine-2-carbonyl-CoA + reduced methyl viologen + ATP
at 67% of the velocity of benzoyl-CoA
654733
Thauera aromatica
? + methyl viologen + ADP + phosphate
-
-
-
?
pyridine-4-carbonyl-CoA + reduced methyl viologen + ATP
at 41% of the velocity of benzoyl-CoA
654733
Thauera aromatica
? + methyl viologen + ADP + phosphate
-
-
-
?
thiophene-2-carbonyl-CoA + reduced methyl viologen + ATP
at 144% of the velocity of benzoyl-CoA
654733
Thauera aromatica
? + methyl viologen + ADP + phosphate
-
-
-
?
thiophene-3-carbonyl-CoA + reduced methyl viologen + ATP
at 10% of the velocity of benzoyl-CoA
654733
Thauera aromatica
? + methyl viologen + ADP + phosphate
-
-
-
?
pH Optimum (protein specific)
pH Optimum Minimum
pH Optimum Maximum
Commentary
Organism
7
-
-
Thauera aromatica
pH Range (protein specific)
pH Minimum
pH Maximum
Commentary
Organism
6.5
8
-
Thauera aromatica
Other publictions for EC 1.3.7.8
No.
1st author
Pub Med
title
organims
journal
volume
pages
year
Activating Compound
Application
Cloned(Commentary)
Crystallization (Commentary)
Engineering
General Stability
Inhibitors
KM Value [mM]
Localization
Metals/Ions
Molecular Weight [Da]
Natural Substrates/ Products (Substrates)
Organic Solvent Stability
Organism
Oxidation Stability
Posttranslational Modification
Purification (Commentary)
Reaction
Renatured (Commentary)
Source Tissue
Specific Activity [micromol/min/mg]
Storage Stability
Substrates and Products (Substrate)
Subunits
Temperature Optimum [°C]
Temperature Range [°C]
Temperature Stability [°C]
Turnover Number [1/s]
pH Optimum
pH Range
pH Stability
Cofactor
Ki Value [mM]
pI Value
IC50 Value
Activating Compound (protein specific)
Application (protein specific)
Cloned(Commentary) (protein specific)
Cofactor (protein specific)
Crystallization (Commentary) (protein specific)
Engineering (protein specific)
General Stability (protein specific)
IC50 Value (protein specific)
Inhibitors (protein specific)
Ki Value [mM] (protein specific)
KM Value [mM] (protein specific)
Localization (protein specific)
Metals/Ions (protein specific)
Molecular Weight [Da] (protein specific)
Natural Substrates/ Products (Substrates) (protein specific)
Organic Solvent Stability (protein specific)
Oxidation Stability (protein specific)
Posttranslational Modification (protein specific)
Purification (Commentary) (protein specific)
Renatured (Commentary) (protein specific)
Source Tissue (protein specific)
Specific Activity [micromol/min/mg] (protein specific)
Storage Stability (protein specific)
Substrates and Products (Substrate) (protein specific)
Subunits (protein specific)
Temperature Optimum [°C] (protein specific)
Temperature Range [°C] (protein specific)
Temperature Stability [°C] (protein specific)
Turnover Number [1/s] (protein specific)
pH Optimum (protein specific)
pH Range (protein specific)
pH Stability (protein specific)
pI Value (protein specific)
Expression
General Information
General Information (protein specific)
Expression (protein specific)
KCat/KM [mM/s]
KCat/KM [mM/s] (protein specific)
729651
Schmid
Enzymes of the benzoyl-coenzym ...
Ferroglobus placidus
Environ. Microbiol.
17
3289-3300
2015
-
-
-
-
-
-
-
-
-
-
-
-
-
5
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
726004
Kuntze
Enzymes involved in the anaero ...
Thauera chlorobenzoica, Thauera chlorobenzoica 3CB-1
Mol. Microbiol.
82
758-769
2011
1
-
-
-
-
-
1
-
-
1
-
9
-
3
-
-
-
-
-
-
6
-
12
-
1
-
-
-
1
-
-
2
-
-
-
1
-
-
2
-
-
-
-
1
-
-
-
1
-
9
-
-
-
-
-
-
6
-
12
-
1
-
-
-
1
-
-
-
1
2
2
1
-
-
700199
Heintz
Differential membrane proteome ...
Geobacter metallireducens
Mol. Cell. Proteomics
8
2159-2169
2009
-
-
-
-
-
-
-
-
1
4
-
1
-
4
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
4
-
1
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
692753
Thiele
Mechanism of enzymatic Birch r ...
Thauera aromatica
J. Am. Chem. Soc.
130
14050-14051
2008
-
-
-
-
-
-
-
-
-
-
-
1
-
2
-
-
1
-
-
-
1
-
1
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
1
-
-
-
1
-
-
1
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
674313
Peres
BadM is a transcriptional repr ...
Rhodopseudomonas palustris
J. Bacteriol.
188
8662-8665
2006
-
-
-
-
-
-
-
-
-
-
-
1
-
2
1
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
-
1
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
671412
Song
Genetic diversity of benzoyl c ...
Acidovorax sp., Acidovorax sp. 2FB7, Azoarcus evansii, Azoarcus toluclasticus, Azoarcus tolulyticus, Azoarcus toluvorans, Magnetospirillum magnetotacticum, Rhodopseudomonas palustris, Thauera aromatica, Thauera chlorobenzoica, Thauera chlorobenzoica 3CB-1, Thauera selenatis, Thauera selenatis 3CB-1
Appl. Environ. Microbiol.
71
2036-2045
2005
-
10
-
-
-
-
-
-
-
-
-
20
-
30
-
-
-
-
-
-
-
-
20
-
-
-
-
-
-
-
-
-
-
-
-
-
17
-
-
-
-
-
-
-
-
-
-
-
-
20
-
-
-
-
-
-
-
-
20
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
676054
Carmona
Iron-reducing bacteria unravel ...
Azoarcus sp., Thauera aromatica
Mol. Microbiol.
58
1210-1215
2005
-
-
-
-
-
-
-
-
-
-
-
2
-
4
-
-
-
-
-
-
-
-
4
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
2
-
-
-
-
-
-
-
-
4
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
654733
Mobitz
Substrate binding and reductio ...
Thauera aromatica
Biochemistry
43
1376-1385
2004
-
-
-
-
-
-
1
11
-
-
-
-
-
3
-
-
-
1
-
-
-
-
12
-
-
-
-
-
1
1
-
-
1
-
-
-
-
-
-
-
-
-
-
1
1
11
-
-
-
-
-
-
-
-
-
-
-
-
12
-
-
-
-
-
1
1
-
-
-
-
-
-
-
-
657182
Unciuleac
Mechanism of ATP-driven electr ...
Thauera aromatica
Proc. Natl. Acad. Sci. USA
98
13619-13624
2001
-
-
-
-
-
-
-
-
-
-
-
-
-
2
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
285200
Boll
Nonaromatic products from anox ...
Thauera aromatica
J. Biol. Chem.
275
21889-21895
2000
-
-
-
-
-
-
-
-
-
-
-
-
-
3
-
-
-
1
-
-
-
-
2
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
2
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
12557
Boll
Identification, and characteri ...
Thauera aromatica
Eur. J. Biochem.
251
946-954
1998
-
-
1
-
-
-
-
-
-
1
1
-
-
4
-
-
1
-
-
-
-
-
1
-
-
-
-
-
-
-
-
2
-
-
-
-
-
1
2
-
-
-
-
-
-
-
-
1
1
-
-
-
-
1
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
12562
Breese
Genes coding the benzoyl-CoA p ...
Thauera aromatica
Eur. J. Biochem.
256
148-154
1998
-
-
1
-
-
-
-
-
-
-
-
-
-
5
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
288500
Heider
Differential induction of enzy ...
Thauera aromatica
Arch. Microbiol.
170
120-131
1998
-
-
-
-
-
-
-
-
-
-
-
-
-
3
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
718
Schneider
Anaerobic metabolism of L-phen ...
Thauera aromatica
Arch. Microbiol.
168
310-320
1997
-
-
-
-
-
-
-
-
-
-
-
-
-
4
-
-
-
-
-
1
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
1
-
-
-
-
-
-
-
-
-
12558
Boll
Benzoyl-CoA reductase (dearoma ...
Thauera aromatica, Thauera aromatica K172
Eur. J. Biochem.
244
840-851
1997
2
-
-
-
-
-
1
2
-
2
-
2
-
5
-
-
1
-
-
-
-
-
6
-
-
-
-
-
-
-
-
-
-
-
-
2
-
-
-
-
-
-
-
1
-
2
-
2
-
2
-
-
-
1
-
-
-
-
6
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
12559
Boll
Benzoyl-coenzyme A reductase ( ...
Thauera aromatica
Eur. J. Biochem.
234
921-933
1995
-
-
-
-
-
1
4
3
-
6
5
1
-
5
-
-
1
-
-
-
1
-
14
1
-
-
-
-
1
1
-
1
-
-
-
-
-
-
1
-
-
1
-
4
-
3
-
6
5
1
-
-
-
1
-
-
1
-
14
1
-
-
-
-
1
1
-
-
-
-
-
-
-
-
12563
Koch
Enzymatic reduction of benzoyl ...
Pseudomonas sp.
Eur. J. Biochem.
205
195-202
1992
-
-
-
-
-
-
-
1
-
-
-
1
-
3
-
-
-
-
-
-
1
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
-
-
-
1
-
-
-
-
-
-
1
-
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-