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Literature summary for 1.3.7.12 extracted from

  • Hu, B.; Zhu, J.; Wu, H.; Xu, K.; Zhai, H.; Guo, N.; Gao, Y.; Yang, J.; Zhu, D.; Xia, Z.
    Enhanced chlorophyll degradation triggers the pod degreening of Golden Hook, a special ecotype in common bean (Phaseolus vulgaris L.) (2020), Front. Genet., 11, 570816 .
    View publication on PubMedView publication on EuropePMC
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Cloned(Commentary)

Cloned (Comment) Organism
transcriptome analysis and real-time quantitative PCR enzyme expression analysis in wild-type and mutant lines Phaseolus vulgaris

Protein Variants

Protein Variants Comment Organism
M729G a naturally occuring green pod mutant Phaseolus vulgaris
M729Y a naturally occuring yellow pod mutant Phaseolus vulgaris
additional information two green pod mutant lines (M693 and M756) and one mutant line (M729) whose pod color is segregated (yellow pod named M729Y and green pod named M729G) are selected. During pod development, the genes for chlorophyll synthesis, e.g. as HEMC (Phvul.002G034500), glutamyl transfer RNA (tRNA) reductase (HEMA, Phvul.002G216100), CHLI (Phvul.003G057600, Phvul.006G178400), and POR (Phvul.005G083700, Phvul.011G148900), are decreasing throughout in the wild-type, whereas the genes for chlorophyll synthesis in the green pod mutant increased slightly from GP-2 to GP-5 and thereafter decreased. In particular, the transcription of POR (Phvul.005G083700) shows the opposite pattern when the pods extend from 2 to 5 cm, which is increased in the green pod mutant but decreased steeply in wild-type Phaseolus vulgaris

Localization

Localization Comment Organism GeneOntology No. Textmining
chloroplast
-
 Phaseolus vulgaris 9507
-

Organism

Organism UniProt Comment Textmining
Phaseolus vulgaris V7BA09 wild-type cultivar Dalong 1
-

Source Tissue

Source Tissue Comment Organism Textmining
pod
-
 Phaseolus vulgaris
-

Synonyms

Synonyms Comment Organism
PHAVU_008G280300g
-
 Phaseolus vulgaris

Expression

Organism Comment Expression
Phaseolus vulgaris expression levels of red chlorophyll catabolite reductase (RCCR) are enhanced at an early stage (2 cm long) in wild-type but not in green pod mutants up

General Information

General Information Comment Organism
malfunction expression levels of red chlorophyll catabolite reductase (RCCR) is strongly enhanced at an early stage (2 cm long) in wild-type but not in green pod mutants. The expression levels of genes involved in cellulose synthesis is inhibited by the pod degreening. Metabolomic profiling shows that the content of most flavonoid, flavones, and isoflavonoid is decreased during pod development, but the content of afzelechin, taxifolin, dihydrokaempferol, and cyanidin 3-O-rutinoside is remarkably increased in both wild-type and green pod mutant. Analysis of transcriptome and metabolome of the yellow pod cultivar of the common bean golden hook ecotype and its green pod mutants yielded via gamma radiation, phenotypes, overview Phaseolus vulgaris
physiological function red chlorophyll catabolite reductase (RCCR) is involved in chlorophyll degradation Phaseolus vulgaris