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Literature summary for 1.14.99.39 extracted from

  • Wang, J.G.; Xia, F.; Zeleke, J.; Zou, B.; Rhee, S.K.; Quan, Z.X.
    An improved protocol with a highly degenerate primer targeting copper-containing membrane-bound monooxygenase genes for community analysis of methane- and ammonia-oxidizing bacteria (2017), FEMS Microbiol. Ecol., 93, doi: 10.1093/femsec/fiw244 .
    View publication on PubMed

Application

Application Comment Organism
analysis gene amoA, which encodes the key subunit of the AMO enzyme is commonly used as functional biomarker for surveying aerobic methane or ammonia oxidizers in the environment uncultured Nitrospirae bacterium
analysis gene amoA, which encodes the key subunit of the AMO enzyme is commonly used as functional biomarker for surveying aerobic methane or ammonia oxidizers in the environment uncultured beta proteobacterium
environmental protection gene amoA, which encodes the key subunit of the AMO enzyme is commonly used as functional biomarker for surveying aerobic methane or ammonia oxidizers in the environment uncultured Nitrospirae bacterium
environmental protection gene amoA, which encodes the key subunit of the AMO enzyme is commonly used as functional biomarker for surveying aerobic methane or ammonia oxidizers in the environment uncultured beta proteobacterium

Cloned(Commentary)

Cloned (Comment) Organism
gene pmoA, design of a highly degenerate primer targeting copper-containing membrane-bound monooxygenase genes for community analysis of methane- and ammonia-oxidizing bacteria, two-step PCR strategy employing a tagged highly degenerate primer (THDP), designated THDP-PCR, method development and optimization, overview. DNA and amino acid sequence determination and analysis, phylogenetic analysis uncultured Nitrospirae bacterium
gene pmoA, design of a highly degenerate primer targeting copper-containing membrane-bound monooxygenase genes for community analysis of methane- and ammonia-oxidizing bacteria, two-step PCR strategy employing a tagged highly degenerate primer (THDP), designated THDP-PCR, method development and optimization, overview. DNA and amino acid sequence determination and analysis, phylogenetic analysis uncultured beta proteobacterium

Organism

Organism UniProt Comment Textmining
uncultured beta proteobacterium A0A1L2D5R8
-
-
uncultured Nitrospirae bacterium A0A1L2D5S3
-
-

Synonyms

Synonyms Comment Organism
ammonia monooxygenase
-
uncultured Nitrospirae bacterium
ammonia monooxygenase
-
uncultured beta proteobacterium
AMO
-
uncultured Nitrospirae bacterium
AMO
-
uncultured beta proteobacterium
amoA
-
uncultured Nitrospirae bacterium
amoA
-
uncultured beta proteobacterium
copper-containing membrane-bound monooxygenase
-
uncultured Nitrospirae bacterium
copper-containing membrane-bound monooxygenase
-
uncultured beta proteobacterium
CuMMO
-
uncultured Nitrospirae bacterium
CuMMO
-
uncultured beta proteobacterium