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Literature summary for 1.14.13.107 extracted from

  • van der Werf, M.J.; Swarts, H.J.; de Bont, J.A.
    Rhodococcus erythropolis DCL14 contains a novel degradation pathway for limonene (1999), Appl. Environ. Microbiol., 65, 2092-2102.
    View publication on PubMedView publication on EuropePMC
Search for more literature for 1.14.13.107

Activating Compound

Activating Compound Comment Organism Structure
additional information induction by limonene Rhodococcus erythropolis

Localization

Localization Comment Organism GeneOntology No. Textmining
soluble
-
 Rhodococcus erythropolis
-
-

Natural Substrates/ Products (Substrates)

Natural Substrates Organism Comment (Nat. Sub.) Natural Products Comment (Nat. Pro.) Rev. Reac.
(4R)-limonene + NADH + H+ + O2 Rhodococcus erythropolis a step in the limonene degradation pathway. (1S,2S,4R)-Limonene-1,2-diol, (1S,4R)-1-hydroxy-2-oxolimonene, and (3R)-3-isopropenyl-6-oxoheptanoate are intermediates in the (4R)-limonene degradation pathway, , metabolite identification by mass spectrometry 1,2-epoxymenth-8-ene + NAD+ + H2O
-
 ?
(4R)-limonene + NADH + H+ + O2 Rhodococcus erythropolis DCL14 a step in the limonene degradation pathway. (1S,2S,4R)-Limonene-1,2-diol, (1S,4R)-1-hydroxy-2-oxolimonene, and (3R)-3-isopropenyl-6-oxoheptanoate are intermediates in the (4R)-limonene degradation pathway, , metabolite identification by mass spectrometry 1,2-epoxymenth-8-ene + NAD+ + H2O
-
 ?
(4S)-limonene + NADH + H+ + O2 Rhodococcus erythropolis a step in the limonene degradation pathway. (1R,2R,4S)-Limonene-1,2-diol, (1R,4S)-1-hydroxy-2-oxolimonene, and (3S)-3-isopropenyl-6-oxoheptanoate are intermediates in the (4S)-limonene degradation pathway, metabolite identification by mass spectrometry 1,2-epoxymenth-8-ene + NAD+ + H2O
-
 ?
(4S)-limonene + NADH + H+ + O2 Rhodococcus erythropolis DCL14 a step in the limonene degradation pathway. (1R,2R,4S)-Limonene-1,2-diol, (1R,4S)-1-hydroxy-2-oxolimonene, and (3S)-3-isopropenyl-6-oxoheptanoate are intermediates in the (4S)-limonene degradation pathway, metabolite identification by mass spectrometry 1,2-epoxymenth-8-ene + NAD+ + H2O
-
 ?
additional information Rhodococcus erythropolis strain DCL14 is able to grow on limonene as a sole source of carbon and energy, but also assimilates the terpenes limonene-1,2-epoxide, limonene-1,2-diol, carveol, carvone, and (-)-menthol, while perillyl alcohol is not utilized as a carbon and energy source ?
-
 ?
additional information Rhodococcus erythropolis DCL14 strain DCL14 is able to grow on limonene as a sole source of carbon and energy, but also assimilates the terpenes limonene-1,2-epoxide, limonene-1,2-diol, carveol, carvone, and (-)-menthol, while perillyl alcohol is not utilized as a carbon and energy source ?
-
 ?

Organism

Organism UniProt Comment Textmining
Rhodococcus erythropolis Q9EUT9 isolated from a freshwater sediment sample
-
Rhodococcus erythropolis DCL14 Q9EUT9 isolated from a freshwater sediment sample
-

Source Tissue

Source Tissue Comment Organism Textmining
cell culture temperatures greater than 30°C inhibit growth completely. Growth rates on different substrates, overview Rhodococcus erythropolis
-

Substrates and Products (Substrate)

Substrates Comment Substrates Organism Products Comment (Products) Rev. Reac.
(4R)-limonene + NADH + H+ + O2 a step in the limonene degradation pathway. (1S,2S,4R)-Limonene-1,2-diol, (1S,4R)-1-hydroxy-2-oxolimonene, and (3R)-3-isopropenyl-6-oxoheptanoate are intermediates in the (4R)-limonene degradation pathway, , metabolite identification by mass spectrometry Rhodococcus erythropolis 1,2-epoxymenth-8-ene + NAD+ + H2O
-
 ?
(4R)-limonene + NADH + H+ + O2 oxygen-dependent reaction Rhodococcus erythropolis 1,2-epoxymenth-8-ene + NAD+ + H2O
-
 ?
(4R)-limonene + NADH + H+ + O2 a step in the limonene degradation pathway. (1S,2S,4R)-Limonene-1,2-diol, (1S,4R)-1-hydroxy-2-oxolimonene, and (3R)-3-isopropenyl-6-oxoheptanoate are intermediates in the (4R)-limonene degradation pathway, , metabolite identification by mass spectrometry Rhodococcus erythropolis DCL14 1,2-epoxymenth-8-ene + NAD+ + H2O
-
 ?
(4R)-limonene + NADH + H+ + O2 oxygen-dependent reaction Rhodococcus erythropolis DCL14 1,2-epoxymenth-8-ene + NAD+ + H2O
-
 ?
(4S)-limonene + NADH + H+ + O2 a step in the limonene degradation pathway. (1R,2R,4S)-Limonene-1,2-diol, (1R,4S)-1-hydroxy-2-oxolimonene, and (3S)-3-isopropenyl-6-oxoheptanoate are intermediates in the (4S)-limonene degradation pathway, metabolite identification by mass spectrometry Rhodococcus erythropolis 1,2-epoxymenth-8-ene + NAD+ + H2O
-
 ?
(4S)-limonene + NADH + H+ + O2 oxygen-dependent reaction Rhodococcus erythropolis 1,2-epoxymenth-8-ene + NAD+ + H2O
-
 ?
(4S)-limonene + NADH + H+ + O2 a step in the limonene degradation pathway. (1R,2R,4S)-Limonene-1,2-diol, (1R,4S)-1-hydroxy-2-oxolimonene, and (3S)-3-isopropenyl-6-oxoheptanoate are intermediates in the (4S)-limonene degradation pathway, metabolite identification by mass spectrometry Rhodococcus erythropolis DCL14 1,2-epoxymenth-8-ene + NAD+ + H2O
-
 ?
(4S)-limonene + NADH + H+ + O2 oxygen-dependent reaction Rhodococcus erythropolis DCL14 1,2-epoxymenth-8-ene + NAD+ + H2O
-
 ?
additional information strain DCL14 is able to grow on limonene as a sole source of carbon and energy, but also assimilates the terpenes limonene-1,2-epoxide, limonene-1,2-diol, carveol, carvone, and (-)-menthol, while perillyl alcohol is not utilized as a carbon and energy source Rhodococcus erythropolis ?
-
 ?
additional information strain DCL14 is able to grow on limonene as a sole source of carbon and energy, but also assimilates the terpenes limonene-1,2-epoxide, limonene-1,2-diol, carveol, carvone, and (-)-menthol, while perillyl alcohol is not utilized as a carbon and energy source Rhodococcus erythropolis DCL14 ?
-
 ?

Temperature Optimum [°C]

Temperature Optimum [°C] Temperature Optimum Maximum [°C] Comment Organism
30
-
 assay at Rhodococcus erythropolis

pH Optimum

pH Optimum Minimum pH Optimum Maximum Comment Organism
7
-
 assay at Rhodococcus erythropolis

Cofactor

Cofactor Comment Organism Structure
FAD dependent on Rhodococcus erythropolis
additional information the enzyme is no cytochrome P-450-enzyme Rhodococcus erythropolis
NADH dependent on Rhodococcus erythropolis