Cloned (Comment) | Organism |
---|---|
expressed in Escherichia coli | Homo sapiens |
Protein Variants | Comment | Organism |
---|---|---|
D206N | alpha-subunit mutant | Homo sapiens |
D206N | specific activity of the alpha-subunit mutant enzyme is 1.3fold higher than specific activity of wild-type enzyme | Homo sapiens |
D215N | gamma-subunit mutant | Homo sapiens |
D215N | specific activity of the gamma-subunit mutant enzyme is 17% of specific activity of wild-type enzyme. 100fold increase in KM-value for Mn2+. Km-value for isocitrate is elevated | Homo sapiens |
D217N | beta-subunit mutant | Homo sapiens |
D217N | specific activity of the beta-subunit mutant enzyme is 33% of specific activity of wild-type enzyme. 16fold increase in KM-vlaue for NAD+ | Homo sapiens |
D230C | alpha-subunit mutant | Homo sapiens |
D230C | specific activity of the alpha-subunit mutant enzyme is 6% of specific activity of wild-type enzyme. 32fold increase in KM-value for Mn2+. Km-value for isocitrate is elevated. 16fold increase in KM-vlaue for NAD+ | Homo sapiens |
D230N | alpha-subunit mutant | Homo sapiens |
D230N | mutation in alpha-subunit results in complete loss of activity | Homo sapiens |
D234C | alpha-subunit mutant | Homo sapiens |
D234C | specific activity of the alpha-subunit mutant enzyme is 1% of specific activity of wild-type enzyme | Homo sapiens |
D234N | alpha-subunit mutant | Homo sapiens |
D234N | mutation in alpha-subunit results in complete loss of activity | Homo sapiens |
KM Value [mM] | KM Value Maximum [mM] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|
0.04 | - |
NAD+ | 25°C, pH 7.2, alpha-subunit mutant enzyme D234C | Homo sapiens | |
0.07 | - |
NAD+ | 25°C, pH 7.2, wild-type enzyme | Homo sapiens | |
0.14 | - |
NAD+ | 25°C, pH 7.2, alpha-subunit mutant enzyme D206N | Homo sapiens | |
0.19 | - |
NAD+ | 25°C, pH 7.2, gamma-subunit mutant enzyme D215N | Homo sapiens | |
0.68 | - |
NAD+ | 25°C, pH 7.2, beta-subunit mutant enzyme D217N | Homo sapiens | |
1.1 | - |
NAD+ | 25°C, pH 7.2, alpha-subunit mutant enzyme D230C | Homo sapiens | |
2.2 | - |
isocitrate | wild type enzyme in 20 mM isocitrate and 1mM MnSO4 | Homo sapiens | |
2.2 | - |
isocitrate | 25°C, pH 7.2, wild-type enzyme | Homo sapiens | |
3.4 | - |
isocitrate | D234C, alpha-subunit mutant, in 20 mM isocitrate and 1mM MnSO4 | Homo sapiens | |
3.4 | - |
isocitrate | 25°C, pH 7.2, alpha-subunit mutant enzyme D234C | Homo sapiens | |
3.5 | - |
isocitrate | D206N, alpha-subunit mutant, in 20 mM isocitrate and 1mM MnSO4 | Homo sapiens | |
3.5 | - |
isocitrate | 25°C, pH 7.2, alpha-subunit mutant enzyme D206N | Homo sapiens | |
5.1 | - |
isocitrate | D217N, beta-subunit mutant, in 20 mM isocitrate and 1mM MnSO4 | Homo sapiens | |
5.1 | - |
isocitrate | 25°C, pH 7.2, beta-subunit mutant enzyme D217N | Homo sapiens | |
20 | - |
isocitrate | D230C, alpha-subunit mutant, in 20 mM isocitrate and 1mM MnSO4 | Homo sapiens | |
20 | - |
isocitrate | 25°C, pH 7.2, alpha-subunit mutant enzyme D230C | Homo sapiens | |
41 | - |
isocitrate | D215N, gamma-subunit mutant, in 20 mM isocitrate and 1mM MnSO4 | Homo sapiens | |
41 | - |
isocitrate | 25°C, pH 7.2, gamma-subunit mutant enzyme D215N | Homo sapiens |
Metals/Ions | Comment | Organism | Structure |
---|---|---|---|
Co2+ | essential divalent metal ion | Homo sapiens | |
Mg2+ | essential divalent metal ion | Homo sapiens | |
Mn2+ | essential divalent metal ion | Homo sapiens | |
Mn2+ | alpha subunit Asp230 and gamma-subunit Asp215 may interact directly with the Mn2+. KM-value: 0.22 mM for wild-type enzyme, 0.32 mM for alpha-subunit mutant enzyme D206N, 7.13 mM for alpha-subunit mutant enzyme D230C, 0.46 mM for alpha-subunit mutant enzyme D234C, 0.1 mM for beta-subunit mutant enzyme D217N, 21.1 mM for gamma-subunit mutant enzyme D215N | Homo sapiens |
Molecular Weight [Da] | Molecular Weight Maximum [Da] | Comment | Organism |
---|---|---|---|
37000 | - |
2 * 37000, 1 * 39000, 1 * 39000 | Homo sapiens |
39000 | - |
2 * 37000, 1 * 39000, 1 * 39000 | Homo sapiens |
Organism | UniProt | Comment | Textmining |
---|---|---|---|
Homo sapiens | - |
- |
- |
Purification (Comment) | Organism |
---|---|
ammonium sulfate fractionation and gel filtration | Homo sapiens |
Specific Activity Minimum [µmol/min/mg] | Specific Activity Maximum [µmol/min/mg] | Comment | Organism |
---|---|---|---|
0.2 | - |
D234C, alpha-subunit mutant, in 20 mM D-isocitrate and 1 mM MnSO4 | Homo sapiens |
1.4 | - |
D230C, alpha-subunit mutant, in 20 mM D-isocitrate and 1 mM MnSO4 | Homo sapiens |
3.7 | - |
D215N, gamma-subunit mutant, in 20 mM D-isocitrate and 1 mM MnSO4 | Homo sapiens |
7.3 | - |
D217N, beta-subunit mutant, in 20 mM D-isocitrate and 1 mM MnSO4 | Homo sapiens |
22 | - |
wild type enzyme, in 20 mM D-isocitrate and 1 mM MnSO4 | Homo sapiens |
29 | - |
D206N, alpha-subunit mutant, in 20 mM D-isocitrate and 1 mM MnSO4 | Homo sapiens |
Substrates | Comment Substrates | Organism | Products | Comment (Products) | Rev. | Reac. |
---|---|---|---|---|---|---|
D-isocitrate + NAD+ | - |
Homo sapiens | 2-oxoglutarate + CO2 + NADH | - |
? | |
isocitrate + NAD+ | - |
Homo sapiens | 2-oxoglutarate + CO2 + NADH + H+ | - |
? |
Subunits | Comment | Organism |
---|---|---|
heterotetramer | 2 * 37000, 1 * 39000, 1 * 39000 | Homo sapiens |
Synonyms | Comment | Organism |
---|---|---|
IDH | - |
Homo sapiens |
NAD-dependent isocitrate dehydrogenase | - |
Homo sapiens |
NAD-IDH | - |
Homo sapiens |
Turnover Number Minimum [1/s] | Turnover Number Maximum [1/s] | Substrate | Comment | Organism | Structure |
---|---|---|---|---|---|
0.27 | - |
D-isocitrate | D234C, alpha-subunit mutant, in 20 mM isocitrate and 1 mM MnSO4 | Homo sapiens | |
0.27 | - |
NAD+ | 25°C, pH 7.2, alpha-subunit mutant enzyme D234C | Homo sapiens | |
0.27 | - |
isocitrate | 25°C, pH 7.2, alpha-subunit mutant enzyme D234C | Homo sapiens | |
2.49 | - |
D-isocitrate | D230C, alpha-subunit mutant, in 20 mM isocitrate and 1 mM MnSO4 | Homo sapiens | |
2.49 | - |
NAD+ | 25°C, pH 7.2, alpha-subunit mutant enzyme D230C | Homo sapiens | |
2.49 | - |
isocitrate | 25°C, pH 7.2, alpha-subunit mutant enzyme D230C | Homo sapiens | |
11.8 | - |
D-isocitrate | D215N, gamma-subunit mutant, in 20 mM isocitrate and 1 mM MnSO4 | Homo sapiens | |
11.8 | - |
NAD+ | 25°C, pH 7.2, gamma-subunit mutant enzyme D215N | Homo sapiens | |
11.8 | - |
isocitrate | 25°C, pH 7.2, gamma-subunit mutant enzyme D215N | Homo sapiens | |
19.6 | - |
D-isocitrate | D217N, beta-subunit mutant, in 20 mM isocitrate and 1 mM MnSO4 | Homo sapiens | |
19.6 | - |
NAD+ | 25°C, pH 7.2, beta-subunit mutant enzyme D217N | Homo sapiens | |
19.6 | - |
isocitrate | 25°C, pH 7.2, beta-subunit mutant enzyme D217N | Homo sapiens | |
30 | - |
D-isocitrate | wild type enzyme in 20 mM isocitrate and 1 mM MnSO4 | Homo sapiens | |
30 | - |
NAD+ | 25°C, pH 7.2, wild-type enzyme | Homo sapiens | |
30 | - |
isocitrate | 25°C, pH 7.2, wild-type enzyme | Homo sapiens | |
36.8 | - |
D-isocitrate | D206N, alpha-subunit mutant, in 20 mM isocitrate and 1 mM MnSO4 | Homo sapiens | |
36.8 | - |
NAD+ | 25°C, pH 7.2, alpha-subunit mutant enzyme D206N | Homo sapiens | |
36.8 | - |
isocitrate | 25°C, pH 7.2, alpha-subunit mutant enzyme D206N | Homo sapiens |
Cofactor | Comment | Organism | Structure |
---|---|---|---|
NAD+ | - |
Homo sapiens | |
NADH | - |
Homo sapiens |