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Reference on EC 7.1.1.3 - ubiquinol oxidase (H+-transporting)

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REF.
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Abramson, J.; Larsson, G.; Byrne, B.; Puustinen, A.; Garcia-Horsman, A.; Iwata, S.
Purification, crystallization and preliminary crystallographic studies of an integral membrane protein, cytochrome bo3 ubiquinol oxidase from Escherichia coli
Acta Crystallogr. Sect. D
56
1076-1078
2000
Escherichia coli, Escherichia coli GO105
Manually annotated by BRENDA team
Minghetti, K.C.; Goswitz, V.C.; Gabriel, N.E.; Hill, J.J.; Barassi, C.A.; Georgiou, C.D.; Chan, S.I.; Gennis, R.B.
Modified, large-scale purification of the cytochrome o complex (bo-type oxidase) of Escherichia coli yields a two heme/one copper terminal oxidase with high specific activity
Biochemistry
31
6917-6924
1992
Escherichia coli, Escherichia coli RG145
Manually annotated by BRENDA team
Thomas, J.W.; Puustinen, A.; Alben, J.O.; Gennis, R.B.; Wikstroem, M.
Substitution of asparagine for aspartate-135 in subunit I of the cytochrome bo ubiquinol oxidase of Escherichia coli eliminates proton-pumping activity
Biochemistry
32
10923-10928
1993
Escherichia coli, Escherichia coli GL101
Manually annotated by BRENDA team
Thomas, J.W.; Lemieux, L.J.; Alben, J.O.; Gennis, R.B.
Site-directed mutagenesis of highly conserved residues in helix VIII of subunit I of the cytochrome bo ubiquinol oxidase from Escherichia coli: an amphipathic transmembrane helix that may be important in conveying protons to the binuclear center
Biochemistry
32
11173-11180
1993
Escherichia coli, Escherichia coli GL101
Manually annotated by BRENDA team
Calhoun, M.W.; Hill, J.J.; Lemieux, L.J.; Ingledew, W.J.; Alben, J.O.; Gennis, R.B.
Site-directed mutants of the cytochrome bo ubiquinol oxidase of Escherichia coli: amino acid substitutions for two histidines that are putative CuB ligands
Biochemistry
32
11524-11529
1993
Escherichia coli, Escherichia coli GLlOl
Manually annotated by BRENDA team
Garcia-Horsman, J.; Puustinen, A.; Gennis, R.; Wikstrom, M.
Proton transfer in cytochrome bo3 ubiquinol oxidase of Escherichia coli: second-site mutations in subunit I that restore proton pumping in the mutant Asp135-->Asn
Biochemistry
34
4428-4433
1995
Escherichia coli
Manually annotated by BRENDA team
Ek, M.S.; Brzezinski, P.
Oxidation of ubiquinol by cytochrome bo3 from Escherichia coli: Kinetics of electron and proton transfer
Biochemistry
36
5425-5431
1997
Escherichia coli
Manually annotated by BRENDA team
Mogi, T.; Minagawa, J.; Hirano, T.; Sato-Watanabe, M.; Tsubaki, M.; Uno, T.; Hori, H.; Nakamura, H.; Nishimura, Y.; Anraku, Y.
Substitutions of conserved aromatic amino acid residues in subunit I perturb the metal centers of the Escherichia coli bo-type ubiquinol oxidase
Biochemistry
37
1632-1639
1998
Escherichia coli, Escherichia coli GO103/pMFO2
Manually annotated by BRENDA team
Egawa, T.; Lin, M.T.; Hosler, J.P.; Gennis, R.B.; Yeh, S.R.; Rousseau, D.L.
Communication between R481 and CuB in cytochrome bo3 ubiquinol oxidase from Escherichia coli
Biochemistry
48
12113-12124
2009
Escherichia coli
Manually annotated by BRENDA team
Miyoshi-Akiyama, T.; Hayashi, M.; Unemoto, T.
Purification and properties of cytochrome bo-type ubiquinol oxidase from a marine bacterium Vibrio alginolyticus
Biochim. Biophys. Acta
1141
283-287
1993
Vibrio alginolyticus
Manually annotated by BRENDA team
Bolgiano, B.; Salmon, I.; Poole, R.K.
Reactions of the membrane-bound cytochrome bo terminal oxidase of Escherichia coli with carbon monoxide and oxygen
Biochim. Biophys. Acta
1141
95-104
1993
Escherichia coli, Escherichia coli RG145
Manually annotated by BRENDA team
Yap, L.L.; Lin, M.T.; Ouyang, H.; Samoilova, R.I.; Dikanov, S.A.; Gennis, R.B.
The quinone-binding sites of the cytochrome bo3 ubiquinol oxidase from Escherichia coli
Biochim. Biophys. Acta
1797
1924-1932
2010
Escherichia coli
Manually annotated by BRENDA team
Egawa, T.; Ganesan, K.; Lin, M.T.; Yu, M.A.; Hosler, J.P.; Yeh, S.R.; Rousseau, D.L.; Gennis, R.B.
Differential effects of glutamate-286 mutations in the aa3-type cytochrome c oxidase from Rhodobacter sphaeroides and the cytochrome bo3 ubiquinol oxidase from Escherichia coli
Biochim. Biophys. Acta
1807
1342-1348
2011
Escherichia coli, Escherichia coli C43 (DE3)
Manually annotated by BRENDA team
Salerno, J.C.; Ingledew, W.J.
Orientation of the haems of the ubiquinol oxidase:O2 reductase, cytochrome bo of Escherichia coli
Eur. J. Biochem.
198
789-792
1991
Escherichia coli, Escherichia coli RG145
Manually annotated by BRENDA team
Orii, Y.; Mogi, T.; Kawasaki, M.; Anraku, Y.
Facilitated intramolecular electron transfer in cytochrome bo-type ubiquinol oxidase initiated upon reaction of the fully reduced enzyme with dioxygen
FEBS Lett.
352
151-154
1994
Escherichia coli, Escherichia coli GO103
Manually annotated by BRENDA team
Tsubaki, M.; Hori, H.; Mogi, T.
Glutamate-286 mutants of cytochrome bo-type ubiquinol oxidase from Escherichia coli: influence of mutations on the binuclear center structure revealed by FT-IR and EPR spectroscopies
FEBS Lett.
416
247-250
1997
Escherichia coli, Escherichia coli GO103
Manually annotated by BRENDA team
Mogi, T.; Sato-Watanabe, M.; Miyoshi, H.; Orii, Y.
Role of a bound ubiquinone on reactions of the Escherichia coli cytochrome bo with ubiquinol and dioxygen
FEBS Lett.
457
223-226
1999
Escherichia coli, Escherichia coli GO103/pHN3795-1
Manually annotated by BRENDA team
Kawasaki, M.; Mogi, T.; Anraku, Y.
Substitutions of charged amino acid residues conserved in subunit I perturb the redox metal centers of the Escherichia coli bo-type ubiquinol oxidase
J. Biochem.
122
422-429
1997
Escherichia coli, Escherichia coli ST4676
Manually annotated by BRENDA team
Park, K.W.; Kim, K.J.; Howard, A.J.; Stark, B.C.; Webster, D.A.
Vitreoscilla hemoglobin binds to subunit I of cytochrome bo ubiquinol oxidases
J. Biol. Chem.
277
33334-33337
2002
Escherichia coli, Pseudomonas aeruginosa, Vitreoscilla sp., Escherichia coli JM103
Manually annotated by BRENDA team
Shepherd, M.; Sanguinetti, G.; Cook, G.M.; Poole, R.K.
Compensations for diminished terminal oxidase activity in Escherichia coli: cytochrome bd-II-mediated respiration and glutamate metabolism
J. Biol. Chem.
285
18464-18472
2010
Escherichia coli, Escherichia coli BW25113
Manually annotated by BRENDA team
Abramson, J.; Riistama, S.; Larsson, G.; Jasaitis, A.; Svensson-Ek, M.; Laakkonen, L.; Puustinen, A.; Iwata, S.; Wikstrom, M.
The structure of the ubiquinol oxidase from Escherichia coli and its ubiquinone binding site
Nat. Struct. Biol.
7
910-917
2000
Escherichia coli (P0ABJ1), Escherichia coli
Manually annotated by BRENDA team
Belevich, I.; Borisov, V.B.; Zhang, J.; Yang, K.; Konstantinov, A.A.; Gennis, R.B.; Verkhovsky, M.I.
Time-resolved electrometric and optical studies on cytochrome bd suggest a mechanism of electron-proton coupling in the di-heme active site
Proc. Natl. Acad. Sci. USA
102
3657-3662
2005
Escherichia coli, Escherichia coli GO105
Manually annotated by BRENDA team
Yildiz, A.A.; Knoll, W.; Gennis, R.B.; Sinner, E.K.
Cell-free synthesis of cytochrome bo3 ubiquinol oxidase in artificial membranes
Anal. Biochem.
423
39-45
2012
Escherichia coli
Manually annotated by BRENDA team
Richhardt, J.; Luchterhand, B.; Bringer, S.; Buechs, J.; Bott, M.
Evidence for a key role of cytochrome bo3 oxidase in respiratory energy metabolism of Gluconobacter oxydans
J. Bacteriol.
195
4210-4220
2013
Gluconobacter oxydans
Manually annotated by BRENDA team
Moosa, A.; Lamprecht, D.A.; Arora, K.; Barry, C.E.; Boshoff, H.I.M.; Ioerger, T.R.; Steyn, A.J.C.; Mizrahi, V.; Warner, D.F.
Susceptibility of Mycobacterium tuberculosis cytochrome bd oxidase mutants to compounds targeting the terminal respiratory oxidase, cytochrome c
Antimicrob. Agents Chemother.
61
e01338-17
2017
Mycobacterium tuberculosis, Mycobacterium tuberculosis H37Rv
Manually annotated by BRENDA team
Sun, C.; Taguchi, A.T.; Vermaas, J.V.; Beal, N.J.; OMalley, P.J.; Tajkhorshid, E.; Gennis, R.B.; Dikanov, S.A.
Q-band electron-nuclear double resonance reveals out-of-plane hydrogen bonds stabilize an anionic ubisemiquinone in cytochrome bo3 from Escherichia coli
Biochemistry
55
5714-5725
2016
Escherichia coli
Manually annotated by BRENDA team
Giuffre, A.; Borisov, V.B.; Arese, M.; Sarti, P.; Forte, E.
Cytochrome bd oxidase and bacterial tolerance to oxidative and nitrosative stress
Biochim. Biophys. Acta
1837
1178-1187
2014
Escherichia coli
Manually annotated by BRENDA team
Choi, S.K.; Lin, M.T.; Ouyang, H.; Gennis, R.B.
Searching for the low affinity ubiquinone binding site in cytochrome bo3 from Escherichia coli
Biochim. Biophys. Acta
1858
366-370
2017
Escherichia coli
Manually annotated by BRENDA team
Li, M.; Khan, S.; Rong, H.; Tuma, R.; Hatzakis, N.S.; Jeuken, L.J.C.
Effects of membrane curvature and pH on proton pumping activity of single cytochrome bo3 enzymes
Biochim. Biophys. Acta
1858
763-770
2017
Escherichia coli
Manually annotated by BRENDA team
Hoeser, J.; Hong, S.; Gehmann, G.; Gennis, R.B.; Friedrich, T.
Subunit CydX of Escherichia coli cytochrome bd ubiquinol oxidase is essential for assembly and stability of the di-heme active site
FEBS Lett.
588
1537-1541
2014
Escherichia coli
Manually annotated by BRENDA team
Corbett, D.; Goldrick, M.; Fernandes, V.E.; Davidge, K.; Poole, R.K.; Andrew, P.W.; Cavet, J.; Roberts, I.S.
Listeria monocytogenes has both a bd-type and an aa3-type terminal oxidase which allow growth in different oxygen levels and both are important in infection
Infect. Immun.
85
e00354-17
2017
Listeria monocytogenes
Manually annotated by BRENDA team
Choi, S.K.; Schurig-Briccio, L.; Ding, Z.; Hong, S.; Sun, C.; Gennis, R.B.
Location of the substrate binding site of the cytochrome bo3 ubiquinol oxidase from Escherichia coli
J. Am. Chem. Soc.
139
8346-8354
2017
Escherichia coli
Manually annotated by BRENDA team
Liu, Q.; Lin, Z.; Zhang, Y.; Li, Y.; Wang, Z.; Chen, T.
Improved poly(3-hydroxybutyrate) production in Escherichia coli by inactivation of cytochrome bd-II oxidase or/and NDH-II dehydrogenase in low efficient respiratory chains
J. Biotechnol.
192
170-176
2014
Escherichia coli, Escherichia coli JM109
Manually annotated by BRENDA team
Korshunov, S.; Imlay, K.R.; Imlay, J.A.
The cytochrome bd oxidase of Escherichia coli prevents respiratory inhibition by endogenous and exogenous hydrogen sulfide
Mol. Microbiol.
101
62-77
2016
Escherichia coli, Escherichia coli (P0ABJ1 and P0ABI8 and P0ABJ3 and P0ABJ6)
Manually annotated by BRENDA team
Leclerc, J.; Rosenfeld, E.; Trainini, M.; Martin, B.; Meuric, V.; Bonnaure-Mallet, M.; Baysse, C.
The cytochrome bd oxidase of Porphyromonas gingivalis contributes to oxidative stress resistance and dioxygen tolerance
PLoS ONE
10
e0143808
2015
Porphyromonas gingivalis, Porphyromonas gingivalis ATCC 33277
Manually annotated by BRENDA team
Lu, P.; Heineke, M.H.; Koul, A.; Andries, K.; Cook, G.M.; Lill, H.; van Spanning, R.; Bald, D.
The cytochrome bd-type quinol oxidase is important for survival of Mycobacterium smegmatis under peroxide and antibiotic-induced stress
Sci. Rep.
5
10333
2015
Mycolicibacterium smegmatis, Mycolicibacterium smegmatis mc(2)155
Manually annotated by BRENDA team
Siletsky, S.A.; Dyuba, A.V.; Elkina, D.A.; Monakhova, M.V.; Borisov, V.B.
Spectral-kinetic analysis of recombination reaction of heme centers of bd-type quinol oxidase from Escherichia coli with carbon monoxide
Biochemistry
82
1354-1366
2017
Escherichia coli (P0ABI8), Escherichia coli
Manually annotated by BRENDA team
Yin, J.; Jin, M.; Zhang, H.; Ju, L.; Zhang, L.; Gao, H.
Regulation of nitrite resistance of the cytochrome cbb3 oxidase by cytochrome c ScyA in Shewanella oneidensis
MicrobiologyOpen
4
84-99
2015
Shewanella oneidensis
Manually annotated by BRENDA team
Forte, E.; Borisov, V.B.; Falabella, M.; Colaco, H.G.; Tinajero-Trejo, M.; Poole, R.K.; Vicente, J.B.; Sarti, P.; Giuffre, A.
The terminal oxidase cytochrome bd promotes sulfide-resistant bacterial respiration and growth
Sci. Rep.
6
23788
2016
Escherichia coli (P0ABJ1 and P0ABI8 and P0ABJ3 and P0ABJ6), Escherichia coli (P26459 and P26458), Escherichia coli
Manually annotated by BRENDA team