Reference on EC 4.2.2.3 - mannuronate-specific alginate lyase
Please use the Reference Search for a specific query.
Please wait a moment until all data is loaded. This message will disappear when all data is loaded.
REF. 
AUTHORS
TITLE
JOURNAL
VOL.
PAGES
YEAR
ORGANISM (UNIPROT)
PUBMED ID
SOURCE
Davidson, I.W.; Lawson, C.J.; Sutherland, I.W.
An alginate lysate from Azotobacter vinelandii phage
J. Gen. Microbiol.
98
223-229
1977
Azotobacter vinelandii, Azotobacter vinelandii phage
Doubet, R.S.; Quatrano, R.S.
Properties of alginate lyases from marine bacteria
Appl. Environ. Microbiol.
47
699-703
1984
uncultured marine bacterium
Maramatsu, T.; Egawa, K.
Isozymes of alginate lyase in the mid-gut gland of Turbo cornutus
Agric. Biol. Chem.
44
2587-2594
1980
Turbo cornutus
-
Shimokawa, T.; Yoshida, S.; Takeuchi, T.; Murata, K.; Kobayashi, H.; Kusakabe, I.
Purification and characterization of extracellular poly(beta-D-1,4-mannuronide) lyase from Dendryphiella salina IFO 32139
Biosci. Biotechnol. Biochem.
61
636-640
1997
Paradendryphiella salina
Nakagawa, A.; Ozaki, T.; Chubachi, K.; Hosoyama, T.; Okubo, T.; Iyobe, S.; Suzuki, T.
An effective method for isolating alginate lyase-producing Bacillus sp. ATB-1015 strain and purification and characterization of the lyase
J. Appl. Microbiol.
84
328-335
1998
Bacillus sp. (in: Bacteria), Bacillus sp. (in: Bacteria) ATB-1015
Ertesvag, H.; Erlien, F.; Skjak-Braek, G.; Rehm, B.H.A.; Valla, S.
Biochemical properties and substrate specificities of a recombinantly produced Azotobacter vinelandii alginate lyase
J. Bacteriol.
180
3779-3784
1998
Azotobacter vinelandii, Azotobacter vinelandii (O52195)
Muramatsu, T.; Katayose, M.
A mode of action of alginate lyase from Turbo cornutus on sodium alginate
Agric. Biol. Chem.
43
287-291
1979
Turbo cornutus
-
Muramatsu, T.
Effect of EDTA on the purification of alginate lyase from Turbo cornutus and an analysis of the digestion products by ion exchanger
Agric. Biol. Chem.
43
2611-2612
1979
Turbo cornutus
-
Romeo, T.; Preston II, J.
Purification and structural properties of an extracellular, (1-4)-beta-D-mannuronan-specific alginate lyase from a marine bacterium
Biochemistry
25
8385-8391
1986
uncultured marine bacterium
-
Romeo, T.; Preston III, J.F.
Depolymerization of alginate by an extracellular alginate lyase from a marine bacterium: substrate specificity and accumulation of reaction products
Biochemistry
25
8391-8396
1986
uncultured marine bacterium
-
Hansen, J.B.; Nakamura, L.K.
Distribution of alginate lyase activity among strains of Bacillus circulans
Appl. Environ. Microbiol.
49
1019-1021
1985
Niallia circulans
Muramatsu, T.
Additional evidence for substrate specificities of alginate lyase isoenzymes from Turbo cornutus
Agric. Biol. Chem.
48
811-813
1984
Turbo cornutus
-
Doubet, R.S.; Quatrano, R.S.
Isolation of marine bacteria capable of producing specific lyases for alginate degradation
Appl. Environ. Microbiol.
44
754-756
1982
Macrocystis pyrifera
Favorov, V.V.; Vozhova, E.I.; Denisenko, V.A.; Elyakova, L.A.
A study of the reaction catalysed by alginate lyase VI from the sea mollusc, Littorina sp.
Biochim. Biophys. Acta
569
259-266
1979
Littorina sp.
Elyakova, L.A.; Favorov, V.V.
Isolation and certain properties of alginate lyase VI from the mollusk Littorina sp.
Biochim. Biophys. Acta
358
341-354
1974
Littorina sp.
-
Mramatsu, T.; Imasato, F.
The role of sulfhydryl groups of alginate lyases as evidenced by loss of activity and circular dichroic spectral change caused by chemical modification
Agric. Biol. Chem.
51
1169-1171
1987
Turbo cornutus
-
Fujiyama, K.; Maki, H.; Kinoshita, S.; Yoshida, T.
Purification and characterization of the recombinant alginate lyase from Pseudomonas sp. leaked by Escherichia coli upon addition of glycine
FEMS Microbiol. Lett.
126
19-24
1995
Pseudomonas sp., Pseudomonas sp. OS-ALG-9
Malissard, M.; Chavagnat, F.; Duez, C.; Vacheron, M.J.; Guinand, M.; Michel, G.; Ghuysen, J.M.
Overproduction and properties of the mannuronate alginate lyase AlxMB
FEMS Microbiol. Lett.
126
105-112
1995
uncultured marine bacterium
Muramatsu, T.; Sogi, T.
Characterization of alginate lyases from a marine bacterium
Comp. Biochem. Physiol. B
97
103-108
1990
Pseudomonas sp.
-
Nakada, H.I.; Sweeny, P.C.
Alginic acid degradation by eliminases from abalone hepatopancreas
J. Biol. Chem.
242
845-851
1967
Haliotis corrugata, Haliotis rufescens
Nisizawa, K.; Fujibayashi, S.; Kashiwabara, Y.
Alginate lyases in the hepatopancreas of a marine mollusc, Dolabella auricula Solander
J. Biochem.
64
25-37
1968
Dolabella auricularia
Wong, T.Y.; Preston, L.A.; Schiller, N.L.
Alginate lyase: review of major sources and enzyme characteristics, structure-function analysis, biological roles, and applications
Annu. Rev. Microbiol.
54
289-340
2000
Azotobacter chroococcum, Azotobacter chroococcum (O50660), Azotobacter vinelandii phage, Niallia circulans, Bacillus sp. (in: Bacteria), uncultured bacterium, Turbo cornutus, Paradendryphiella salina, Haliotis corrugata, Haliotis tuberculata, Laminaria digitata, Littorina sp., Pseudomonas aeruginosa, Pseudomonas putida, Stenotrophomonas maltophilia, Pseudomonas syringae, Sphingomonas sp., Spisula solidissima, Vibrio alginolyticus, Pelvetia canaliculata, Undaria pinnatifida, Dollabella auricola, Choromytilus meridionalis, Perna perna, Colpomenia sinuosa, Eisenia bicyclis, Endarachne binghamiae, Fucus spp., Ishige sp., Sargassum sagamianum, Dictyopteris pacifica, Aplysia depilans, Alginovibrio aquatilis, Vibrio sinaloensis, Azotobacter phage A31, Azotobacter phage A22, Asteromyces cruciatus, Corollospora intermedia, Paradendryphiella arenariae, Azotobacter vinelandii (O52195), Azotobacter vinelandii (Q9ZFG9), Photobacterium sp. (P39049), Pseudomonas alginovora (Q59639), Chlorella virus (Q9QT64), Pseudoalteromonas elyakovii (Q9Z6D6), Cobetia marina (Q9ZNB7), Pseudomonas alginovora XO17 (Q59639), Vibrio sinaloensis Alg-A, uncultured bacterium Alg-A, Pseudomonas aeruginosa FRDI, Bacillus sp. (in: Bacteria) ATB-1015, Azotobacter chroococcum 4A1M
Iwamoto, Y.; Araki, R.; Iriyama, K.; Oda, T.; Fukuda, H.; Hayashida, S.; Muramatsu, T.
Purification and characterization of bifunctional alginate lyase from Alteromonas sp. strain no. 272 and its action on saturated oligomeric substrates
Biosci. Biotechnol. Biochem.
65
133-142
2001
Alteromonas sp., Alteromonas sp. 272
Trujillo-Roldan, M.A.; Moreno, S.; Segura, D.; Galindo, E.; Espin, G.
Alginate production by an Azotobacter vinelandii mutant unable to produce alginate lyase
Appl. Microbiol. Biotechnol.
60
733-737
2003
Azotobacter vinelandii
Yoon, H.J.; Hashimoto, W.; Katsuya, Y.; Mezaki, Y.; Murata, K.; Mikami, B.
Crystallization and preliminary X-ray crystallographic analysis of alginate lyase A1-II from Sphingomonas species A1
Biochim. Biophys. Acta
1476
382-385
2000
Sphingomonas sp.
Iwamoto, Y.; Hidaka, H.; Oda, T.; Muramatsu, T.
A study of tryptophan fluorescence quenching of bifunctional alginate lyase from a marine bacterium Pseudoalteromonas sp. strain No. 272 by acrylamide
Biosci. Biotechnol. Biochem.
67
1990-1992
2003
Pseudoalteromonas sp., Pseudoalteromonas sp. 272
Suda, K.; Tanji, Y.; Hori, K.; Unno, H.
Evidence for a novel Chlorella virus-encoded alginate lyase
FEMS Microbiol. Lett.
180
45-53
1999
Chlorella virus (Q9QT64), Chlorella virus
Pecina, A.; Pascual, A.; Paneque, A.
Cloning and expression of the algL gene, encoding the Azotobacter chroococcum alginate lyase: purification and characterization of the enzyme
J. Bacteriol.
181
1409-1414
1999
Azotobacter chroococcum (O50660), Azotobacter chroococcum
Hashimoto, W.; Miyake, O.; Momma, K.; Kawai, S.; Murata, K.
Molecular identification of oligoalginate lyase of Sphingomonas sp. strain A1 as one of the enzymes required for complete depolymerization of alginate
J. Bacteriol.
182
4572-4577
2000
Sphingomonas sp.
Preston, L.A.; Wong, T.Y.; Bender, C.L.; Schiller, N.L.
Characterization of alginate lyase from Pseudomonas syringae pv. syringae
J. Bacteriol.
182
6268-6271
2000
Pseudomonas syringae (Q9L7P2), Pseudomonas syringae
Svanem, B.I.; Strand, W.I.; Ertesvag, H.; Skjak-Braek, G.; Hartmann, M.; Barbeyron, T.; Valla, S.
The catalytic activities of the bifunctional Azotobacter vinelandii mannuronan C-5-epimerase and alginate lyase AlgE7 probably originate from the same active site in the enzyme
J. Biol. Chem.
276
31542-31550
2001
Azotobacter vinelandii, Azotobacter vinelandii (Q9ZFG9)
Yoon, H.J.; Choi, Y.J.; Miyake, O.; Hashimoto, W.; Murata, K.; Mikami, B.
Effect of His192 mutation on the activity of alginate lyase A1-III from Sphingomonas species A1
J. Microbiol. Biotechnol.
11
118-123
2001
Sphingomonas sp.
-
Yoon, H.J.; Mikami, B.; Hashimoto, W.; Murata, K.
Crystal structure of alginate lyase A1-III from Sphingomonas species A1 at 1.78 A resolution
J. Mol. Biol.
290
505-514
1999
Sphingomonas sp.
Yoon, H.J.; Hashimoto, W.; Miyake, O.; Murata, K.; Mikami, B.
Crystal structure of alginate lyase A1-III complexed with trisaccharide product at 2.0 A resolution
J. Mol. Biol.
307
9-16
2001
Sphingomonas sp.
Iwamoto, Y.; Iriyama, K.; Osatomi, K.; Oda, T.; Muramatsu, T.
Primary structure and chemical modification of some amino acid residues of bifunctional alginate lyase from a marine bacterium Pseudoalteromonas sp. strain no. 272
J. Protein Chem.
21
455-463
2002
Pseudoalteromonas sp., Pseudoalteromonas sp. 272
Yoon, H.J.; Hashimoto, W.; Miyake, O.; Okamoto, M.; Mikami, B.; Murata, K.
Overexpression in Escherichia coli, purification, and characterization of Sphingomonas sp. A1 alginate lyases
Protein Expr. Purif.
19
84-90
2000
Sphingomonas sp.
Yamasaki, M.; Ogura, K.; Moriwaki, S.; Hashimoto, W.; Murata, K.; Mikami, B.
Crystallization and preliminary X-ray analysis of alginate lyases A1-II and A1-II' from Sphingomonas sp. A1
Acta Crystallogr. Sect. F
61
288-290
2005
Sphingomonas sp.
Alkawash, M.A.; Soothill, J.S.; Schiller, N.L.
Alginate lyase enhances antibiotic killing of mucoid Pseudomonas aeruginosa in biofilms
Apmis
114
131-138
2006
Pseudomonas aeruginosa
Boyd, A.; Chakrabarty, A.M.
Role of alginate lyase in cell detachment of Pseudomonas aeruginosa
Appl. Environ. Microbiol.
60
2355-2359
1994
Pseudomonas aeruginosa
Trujillo-Roldan, M.A.; Moreno, S.; Espin, G.; Galindo, E.
The roles of oxygen and alginate-lyase in determining the molecular weight of alginate produced by Azotobacter vinelandii
Appl. Microbiol. Biotechnol.
63
742-747
2004
Azotobacter vinelandii
Zhang, Z.; Yu, G.; Guan, H.; Zhao, X.; Du, Y.; Jiang, X.
Preparation and structure elucidation of alginate oligosaccharides degraded by alginate lyase from Vibro sp. 510
Carbohydr. Res.
339
1475-1481
2004
Vibrio sp., Vibrio sp. 510
Han, F.; Gong, Q.H.; Song, K.; Li, J.B.; Yu, W.G.
Cloning, sequence analysis and expression of gene alyVI encoding alginate lyase from marine bacterium Vibrio sp. QY101
DNA Seq.
15
344-350
2004
Vibrio sp. (Q53EJ1), Vibrio sp. QY101 (Q53EJ1)
Rehm, B.H.A.
Alginate lyase from Pseudomonas aeruginosa CF1/M1 prefers the hexameric oligomannuronate as substrate
FEMS Microbiol. Lett.
165
175-180
1998
Pseudomonas aeruginosa, Pseudomonas aeruginosa CF1/M1
Jain, S.; Ohman, D.E.
Role of an alginate lyase for alginate transport in mucoid Pseudomonas aeruginosa
Infect. Immun.
73
6429-6436
2005
Pseudomonas aeruginosa, Pseudomonas aeruginosa (Q06749)
Monday, S.R.; Schiller, N.L.
Alginate synthesis in Pseudomonas aeruginosa: the role of AlgL (alginate lyase) and AlgX
J. bacteriol.
178
625-632
1996
Pseudomonas aeruginosa
Miyake, O.; Ochiai, A.; Hashimoto, W.; Murata, K.
Origin and diversity of alginate lyases of families PL-5 and -7 in Sphingomonas sp. strain A1
J. Bacteriol.
186
2891-2896
2004
Sphingomonas sp. (Q75WP3), Sphingomonas sp.
Albrecht, M.T.; Schiller, N.L.
Alginate lyase (AlgL) activity is required for alginate biosynthesis in Pseudomonas aeruginosa
J. Bacteriol.
187
3869-3872
2005
Pseudomonas aeruginosa
Bakkevig, K.; Sletta, H.; Gimmestad, M.; Aune, R.; Ertesvag, H.; Degnes, K.; Christensen, B.E.; Ellingsen, T.E.; Valla, S.
Role of the Pseudomonas fluorescens alginate lyase (AlgL) in clearing the periplasm of alginates not exported to the extracellular environment
J. Bacteriol.
187
8375-8384
2005
Pseudomonas fluorescens
Yamasaki, M.; Moriwaki, S.; Miyake, O.; Hashimoto, W.; Murata, K.; Mikami, B.
Structure and function of a hypothetical Pseudomonas aeruginosa protein PA1167 classified into family PL-7: a novel alginate lyase with a beta-sandwich fold
J. Biol. Chem.
279
31863-31872
2004
Pseudomonas aeruginosa, Pseudomonas aeruginosa AlgL
Hashimoto, W.; Miyake, O.; Ochiai, A.; Murata, K.
Molecular identification of Sphingomonas sp. A1 alginate lyase (A1-IV') as a member of novel polysaccharide lyase family 15 and implications in alginate lyase evolution
J. Biosci. Bioeng.
99
48-54
2005
Sphingomonas sp. (Q5DWP2)
Osawa, T.; Matsubara, Y.; Muramatsu, T.; Kimura, M.; Kakuta, Y.
Crystal structure of the alginate (poly alpha-l-guluronate) lyase from Corynebacterium sp. at 1.2 A resolution
J. Mol. Biol.
345
1111-1118
2005
Corynebacterium sp.
Yamasaki, M.; Ogura, K.; Hashimoto, W.; Mikami, B.; Murata, K.
A structural basis for depolymerization of alginate by polysaccharide lyase family-7
J. Mol. Biol.
352
11-21
2005
Sphingomonas sp.
Wang, Y.H.; Yu, G.L.; Wang, X.M.; Lv, Z.H.; Zhao, X.; Wu, Z.H.; Ji, W.S.
Purification and characterization of alginate lyase from marine Vibrio sp. YWA
Acta Biochim. Biophys. Sin.
38
633-638
2006
Vibrio sp., Vibrio sp. YWA
Ochiai, A.; Yamasaki, M.; Mikami, B.; Hashimoto, W.; Murata, K.
Crystallization and preliminary X-ray analysis of an exotype alginate lyase Atu3025 from Agrobacterium tumefaciens strain C58, a member of polysaccharide lyase family 15
Acta Crystallogr. Sect. F
62
486-488
2006
Agrobacterium tumefaciens, Agrobacterium tumefaciens C58 / ATCC 33970
Doumeche, B.; Picard, J.; Larreta-Garde, V.
Enzyme-catalyzed phase transition of alginate gels and gelatin-alginate interpenetrated networks
Biomacromolecules
8
3613-3618
2007
Flavobacterium sp.
Ashton, R.S.; Banerjee, A.; Punyani, S.; Schaffer, D.V.; Kane, R.S.
Scaffolds based on degradable alginate hydrogels and poly(lactide-co-glycolide) microspheres for stem cell culture
Biomaterials
28
5518-5525
2007
Homo sapiens
Shin, E.; Park, S.; Jeon, S.; Lee, J.; Kim, Y.; Kim, Y.; Nam, S.
Effect of molecular chaperones on the soluble expression of alginate lyase in E. coli
Biotechnol. Bioprocess Eng.
11
414-419
2006
Pseudoalteromonas elyakovii
-
Breguet, V.; von Stockar, U.; Marison, I.W.
Characterization of alginate lyase activity on liquid, gelled, and complexed states of alginate
Biotechnol. Prog.
23
1223-1230
2007
Flavobacterium sp.
Suzuki, H.; Suzuki, K.; Inoue, A.; Ojima, T.
A novel oligoalginate lyase from abalone, Haliotis discus hannai, that releases disaccharide from alginate polymer in an exolytic manner
Carbohydr. Res.
341
1809-1819
2006
Haliotis discus hannai, Haliotis discus hannai (Q25C77)
Hu, X.; Jiang, X.; Hwang, H.M.
Purification and characterization of an alginate lyase from marine Bacterium vibrio sp. mutant strain 510-64
Curr. Microbiol.
53
135-140
2006
Vibrio sp.
Shen, H.; Han, F.; Lin, Y.; Yu, W.
A high efficient electroporation of Pseudomonas sp. QDA pretreated with alginate lyase
Enzyme Microb. Technol.
39
677-682
2006
Vibrio sp.
-
Sawabe, T.; Takahasi, H.; Saeki, H.; Niwa, K.; Aono, H.
Enhanced expression of active recombinant alginate lyase AlyPEEC cloned from a marine bacterium Pseudoalteromonas elyakovii in Escherichia coli by calcium compounds
Enzyme Microb. Technol.
40
285-291
2007
Pseudoalteromonas elyakovii
-
Cao, L.; Xie, L.; Xue, X.; Tan, H.; Liu, Y.; Zhou, S.
Purification and characterization of alginate lyase from Streptomyces species strain A5 isolated from banana rhizosphere
J. Agric. Food Chem.
55
5113-5117
2007
Streptomyces sp., Streptomyces sp. A5
Ochiai, A.; Hashimoto, W.; Murata, K.
A biosystem for alginate metabolism in Agrobacterium tumefaciens strain C58: molecular identification of Atu3025 as an exotype family PL-15 alginate lyase
Res. Microbiol.
157
642-649
2006
Agrobacterium tumefaciens, Agrobacterium tumefaciens C58 / ATCC 33970
Xiao, L.; Han, F.; Yang, Z.; Lu, X.; Yu, W.
A novel alginate lyase with high activity on acetylated alginate of Pseudomonas aeruginosa FRD1 from Pseudomonas sp. QD03
World J. Microbiol. Biotechnol.
22
81-88
2006
Pseudomonas sp. (Q597B8), Pseudomonas sp. QD03 (Q597B8)
Volpi, N.
Micellar electrokinetic capillary chromatography determination of alginic acid in pharmaceutical formulations after treatment with alginate lyase and UV detection
Electrophoresis
29
3504-3510
2008
Flavobacterium sp.
Yamamoto, S.; Sahara, T.; Sato, D.; Kawasaki, K.; Ohgiya, S.; Inoue, A.; Ojima, T.
Catalytically important amino-acid residues of abalone alginate lyase HdAly assessed by site-directed mutagenesis
Enzyme Microb. Technol.
43
396-402
2008
Haliotis discus hannai
-
An, Q.D.; Zhang, G.L.; Wu, H.T.; Zhang, Z.C.; Zheng, G.S.; Luan, L.; Murata, Y.; Li, X.
Alginate-deriving oligosaccharide production by alginase from newly isolated Flavobacterium sp. LXA and its potential application in protection against pathogens
J. Appl. Microbiol.
106
161-170
2009
Flavobacterium sp.
Ogura, K.; Yamasaki, M.; Mikami, B.; Hashimoto, W.; Murata, K.
Substrate recognition by family 7 alginate lyase from Sphingomonas sp. A1
J. Mol. Biol.
380
373-385
2008
Sphingomonas sp.
Tang, J.C.; Taniguchi, H.; Chu, H.; Zhou, Q.; Nagata, S.
Isolation and characterization of alginate-degrading bacteria for disposal of seaweed wastes
Lett. Appl. Microbiol.
48
38-43
2009
Gracilibacillus sp. A7
Kim, D.E.; Lee, E.Y.; Kim, H.S.
Cloning and Characterization of Alginate Lyase from a Marine Bacterium Streptomyces sp. ALG-5
Mar. Biotechnol.
11
10-16
2009
Streptomyces sp. (A7LFP7)
Liu, G.; Yue, L.; Chi, Z.; Yu, W.; Chi, Z.; Madzak, C.
The Surface Display of the Alginate Lyase on the Cells of Yarrowia lipolytica for Hydrolysis of Alginate
Mar. Biotechnol.
11
619-626
2009
Vibrio sp.
Oglesby, L.L.; Jain, S.; Ohman, D.E.
Membrane topology and roles of Pseudomonas aeruginosa Alg8 and Alg44 in alginate polymerization
Microbiology
154
1605-1615
2008
Pseudomonas aeruginosa (Q06749), Pseudomonas aeruginosa
Ma, L.Y.; Chi, Z.M.; Li, J.; Wu, L.F.
Overexpression of alginate lyase of Pseudoalteromonas elyakovii in Escherichia coli, purification, and characterization of the recombinant alginate lyase
World J. Microbiol. Biotechnol.
24
89-96
2008
Pseudoalteromonas elyakovii
Lafay, B.; Ruimy, R.; de Traubenberg, C.R.; Breittmayer, V.; Gauthier, M.J.; Christen, R.
Roseobacter algicola sp. nov., a new marine bacterium isolated from the phycosphere of the toxin-producing dinoflagellate Prorocentrum lima
Int. J. Syst. Bacteriol.
45
290-296
1995
no activity in Marinovum algicola, no activity in Marinovum algicola ATCC 51442
Hay, I.D.; Gatland, K.; Campisano, A.; Jordens, J.Z.; Rehm, B.H.
Impact of alginate overproduction on attachment and biofilm architecture of a supermucoid Pseudomonas aeruginosa strain
Appl. Environ. Microbiol.
75
6022-6025
2009
Flavobacterium sp.
Matsushima, R.; Danno, H.; Uchida, M.; Ishihara, K.; Suzuki, T.; Kaneniwa, M.; Ohtsubo, Y.; Nagata, Y.; Tsuda, M.
Analysis of extracellular alginate lyase and its gene from a marine bacterial strain, Pseudoalteromonas atlantica AR06
Appl. Microbiol. Biotechnol.
86
567-576
2010
Pseudoalteromonas atlantica, Pseudoalteromonas atlantica AR06
Duan, G.; Han, F.; Yu, W.
Cloning, sequence analysis, and expression of gene alyPI encoding an alginate lyase from marine bacterium Pseudoalteromonas sp. CY24
Can. J. Microbiol.
55
1113-1118
2009
Pseudoalteromonas sp.
Kobayashi, T.; Uchimura, K.; Miyazaki, M.; Nogi, Y.; Horikoshi, K.
A new high-alkaline alginate lyase from a deep-sea bacterium Agarivorans sp.
Extremophiles
13
121-129
2009
Agarivorans sp. (B5BSV2), Agarivorans sp. JAM-A1m (B5BSV2)
Hata, M.; Kumagai, Y.; Rahman, M.; Chiba, S.; Tanaka, H.; Inoue, A.; Ojima, T.
Comparative study on general properties of alginate lyases from some marine gastropod mollusks
Fish. Sci.
75
755-763
2009
Haliotis discus hannai, Haliotis iris, Littorina brevicula, Omphalius rusticus
-
Alipour, M.; Suntres, Z.E.; Omri, A.
Importance of DNase and alginate lyase for enhancing free and liposome encapsulated aminoglycoside activity against Pseudomonas aeruginosa
J. Antimicrob. Chemother.
64
317-325
2009
Homo sapiens
Gimmestad, M.; Ertesvag, H.; Heggeset, T.M.; Aarstad, O.; Svanem, B.I.; Valla, S.
Characterization of three new Azotobacter vinelandii alginate lyases, one of which is involved in cyst germination
J. Bacteriol.
191
4845-4853
2009
Azotobacter vinelandii
Ochiai, A.; Yamasaki, M.; Mikami, B.; Hashimoto, W.; Murata, K.
Crystal structure of exotype alginate lyase Atu3025 from Agrobacterium tumefaciens
J. Biol. Chem.
285
24519-24528
2010
Agrobacterium tumefaciens (A9CEJ9), Agrobacterium tumefaciens
Lee, J.; Bae, M.; Kim, Y.; Nam, S.
Identification and characterization of alginate lyase producing Pseudomonas sp. N7151-6
Korean J. Microbiol. Biotechnol.
37
350-354
2009
Pseudomonas sp., Pseudomonas sp. N7151-6
-
Uchimura, K.; Miyazaki, M.; Nogi, Y.; Kobayashi, T.; Horikoshi, K.
Cloning and sequencing of alginate lyase genes from deep-sea strains of Vibrio and Agarivorans and characterization of a new Vibrio enzyme
Mar. Biotechnol.
12
526-533
2010
Vibrio sp., Vibrio sp. (C4TJD2), Vibrio sp. (C4TJD3), Vibrio sp. (C4TJD4), Agarivorans sp. (C4TIN8), Vibrio sp. A9m, Vibrio sp. A9m (C4TJD2), Vibrio sp. A9m (C4TJD3), Vibrio sp. A9m (C4TJD4), Agarivorans sp. JAM-A1m (C4TIN8)
Inoue, A.; Mashino, C.; Kodama, T.; Ojima, T.
Protoplast preparation from Laminaria japonica with recombinant alginate lyase and cellulase
Mar. Biotechnol.
13
256-263
2011
Haliotis discus hannai
Li, L.; Jiang, X.; Guan, H.; Wang, P.; Guo, H.
Three alginate lyases from marine bacterium Pseudomonas fluorescens HZJ216: Purification and characterization
Appl. Biochem. Biotechnol.
164
305-317
2011
Pseudomonas fluorescens, Pseudomonas fluorescens HZJ216
Rahman, M.M.; Inoue, A.; Tanaka, H.; Ojima, T.
cDNA cloning of an alginate lyase from a marine gastropod Aplysia kurodai and assessment of catalytically important residues of this enzyme
Biochimie
93
1720-1730
2011
Aplysia kurodai (E7FLQ2), Aplysia kurodai
Shin, J.W.; Choi, S.H.; Kim, D.E.; Kim, H.S.; Lee, J.H.; Lee, I.S.; Lee, E.Y.
Heterologous expression of an alginate lyase from Streptomyces sp. ALG-5 in Escherichia coli and its use for preparation of the magnetic nanoparticle-immobilized enzymes
Bioprocess Biosyst. Eng.
34
113-119
2011
Streptomyces sp., Streptomyces sp. ALG-5
Li, L.; Jiang, X.; Guan, H.; Wang, P.
Preparation, purification and characterization of alginate oligosaccharides degraded by alginate lyase from Pseudomonas sp. HZJ 216
Carbohydr. Res.
346
794-800
2011
Pseudomonas sp., Pseudomonas sp. HZJ 216
Rahman, M.M.; Inoue, A.; Tanaka, H.; Ojima, T.
Isolation and characterization of two alginate lyase isozymes, AkAly28 and AkAly33, from the common sea hare Aplysia kurodai
Comp. Biochem. Physiol. B
157
317-325
2010
Aplysia kurodai
Singh, R.; Gupta, V.; Kumari, P.; Kumar, M.; Reddy, C.; Prasad, K.; Jha, B.
Purification and partial characterization of an extracellular alginate lyase from Aspergillus oryzae isolated from brown seaweed
J. Appl. Phycol.
23
755-762
2011
Aspergillus oryzae
-
Tondervik, A.; Klinkenberg, G.; Aarstad, O.; Drablos, F.; Ertesvag, H.; Ellingsen, T.; Skjak-Brak, G.; Valla, S.; Sletta, H.
Isolation of mutant alginate lyases with cleavage specificity for Di-guluronic acid linkages
J. Biol. Chem.
285
35284-35292
2010
Klebsiella pneumoniae, Klebsiella pneumoniae SM0524
Park, H.; Kam, N.; Lee, E.; Kim, H.
Cloning and characterization of a novel oligoalginate lyase from a newly isolated bacterium Sphingomonas sp. MJ-3
Mar. Biotechnol.
14
189-202
2012
Sphingomonas sp. (G1EH67), Sphingomonas sp. MJ-3 (G1EH67)
Li, J.; Dong, S.; Song, J.; Li, C.; Chen, X.; Xie, B.; Zhang, Y.
Purification and characterization of a bifunctional alginate lyase from Pseudoalteromonas sp. SM0524
Mar. Drugs
9
109-123
2011
Pseudoalteromonas sp.
Lamppa, J.; Ackerman, M.; Lai, J.; Scanlon, T.; Griswold, K.
Genetically engineered alginate lyase-peg conjugates exhibit enhanced catalytic function and reduced immunoreactivity
PLoS ONE
6
e17042
2011
Sphingomonas sp. (Q75WP3), Sphingomonas sp. (Q9KWU1)
Mikami, B.; Ban, M.; Suzuki, S.; Yoon, H.J.; Miyake, O.; Yamasaki, M.; Ogura, K.; Maruyama, Y.; Hashimoto, W.; Murata, K.
Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III
Acta Crystallogr. Sect. D
68
1207-1216
2012
Sphingomonas sp. (Q75WP3)
Wolfram, F.; Arora, K.; Robinson, H.; Neculai, A.M.; Yip, P.; Howell, P.L.
Expression, purification, crystallization and preliminary X-ray analysis of Pseudomonas aeruginosa AlgL
Acta Crystallogr. Sect. F
68
584-587
2012
Pseudomonas aeruginosa (Q06749)
Lamppa, J.W.; Griswold, K.E.
Alginate lyase exhibits catalysis-independent biofilm dispersion and antibiotic synergy
Antimicrob. Agents Chemother.
57
137-145
2013
Pseudomonas aeruginosa (Q06749), Pseudomonas aeruginosa, Sphingomonas sp. (Q75WP3)
Kim, H.T.; Chung, J.H.; Wang, D.; Lee, J.; Woo, H.C.; Choi, I.G.; Kim, K.H.
Depolymerization of alginate into a monomeric sugar acid using Alg17C, an exo-oligoalginate lyase cloned from Saccharophagus degradans 2-40
Appl. Microbiol. Biotechnol.
93
2233-2239
2012
Saccharophagus degradans (Q21FJ0), Saccharophagus degradans 2-40 / ATCC 43961 (Q21FJ0)
Lee, S.I.; Choi, S.H.; Lee, E.Y.; Kim, H.S.
Molecular cloning, purification, and characterization of a novel polyMG-specific alginate lyase responsible for alginate MG block degradation in Stenotrophomas maltophilia KJ-2
Appl. Microbiol. Biotechnol.
95
1643-1653
2012
Stenotrophomonas maltophilia (I6P4V6), Stenotrophomonas maltophilia KJ-2 (I6P4V6)
Farrell, E.K.; Tipton, P.A.
Functional characterization of AlgL, an alginate lyase from Pseudomonas aeruginosa
Biochemistry
51
10259-10266
2012
Pseudomonas aeruginosa (Q06749), Pseudomonas aeruginosa
Hamza, A.; Piao, Y.L.; Kim, M.S.; Choi, C.H.; Zhan, C.G.; Cho, H.
Insight into the binding of the wild type and mutated alginate lyase (AlyVI) with its substrate: a computational and experimental study
Biochim. Biophys. Acta
1814
1739-1747
2011
Vibrio sp., Vibrio sp. QY105
Kim, H.T.; Ko, H.J.; Kim, N.; Kim, D.; Lee, D.; Choi, I.G.; Woo, H.C.; Kim, M.D.; Kim, K.H.
Characterization of a recombinant endo-type alginate lyase (Alg7D) from Saccharophagus degradans
Biotechnol. Lett.
34
1087-1092
2012
Saccharophagus degradans
Wang, Y.; Guo, E.W.; Yu, W.G.; Han, F.
Purification and characterization of a new alginate lyase from a marine bacterium Vibrio sp.
Biotechnol. Lett.
35
703-708
2013
Vibrio sp., Vibrio sp. QY105
Dou, W.; Wei, D.; Li, H.; Li, H.; Rahman, M.M.; Shi, J.; Xu, Z.; Ma, Y.
Purification and characterisation of a bifunctional alginate lyase from novel Isoptericola halotolerans CGMCC 5336
Carbohydr. Polym.
98
1476-1482
2013
Isoptericola halotolerans (AB489222), Isoptericola halotolerans CGMCC5336 (AB489222)
Lundqvist, L.C.; Jam, M.; Barbeyron, T.; Czjzek, M.; Sandstroem, C.
Substrate specificity of the recombinant alginate lyase from the marine bacteria Pseudomonas alginovora
Carbohydr. Res.
352
44-50
2012
Pseudomonas alginovora, Pseudomonas alginovora X017
Rahman, M.M.; Wang, L.; Inoue, A.; Ojima, T.
cDNA cloning and bacterial expression of a PL-14 alginate lyase from a herbivorous marine snail Littorina brevicula
Carbohydr. Res.
360
69-77
2012
Littorina brevicula (G9MBE4), Littorina brevicula
Thomas, F.; Lundqvist, L.C.; Jam, M.; Jeudy, A.; Barbeyron, T.; Sandstroem, C.; Michel, G.; Czjzek, M.
Comparative characterization of two marine alginate lyases from Zobellia galactanivorans reveals distinct modes of action and exquisite adaptation to their natural substrate
J. Biol. Chem.
288
23021-23037
2013
Zobellia galactanivorans (G0L2Y1), Zobellia galactanivorans, Zobellia galactanivorans DSM 12802 (G0L2Y1)
Park, D.; Jagtap, S.; Nair, S.K.
Structure of a PL17 family alginate lyase demonstrates functional similarities among exotype depolymerases
J. Biol. Chem.
289
8645-8655
2014
Saccharophagus degradans (Q21FJ0), Saccharophagus degradans, Saccharophagus degradans DSM 17024 (Q21FJ0)
Sim, S.J.; Baik, K.S.; Park, S.C.; Choe, H.N.; Seong, C.N.; Shin, T.S.; Woo, H.C.; Cho, J.Y.; Kim, D.
Characterization of alginate lyase gene using a metagenomic library constructed from the gut microflora of abalone
J. Ind. Microbiol. Biotechnol.
39
585-593
2012
Klebsiella pneumoniae (Q59478), Klebsiella pneumoniae
Ravanal, M.; Sharma, S.; Gimpel, J.; Reveco-Urzua, F.; Overland, M.; Horn, S.; Lienqueo, M.
The role of alginate lyases in the enzymatic saccharification of brown macroalgae, Macrocystis pyrifera and Saccharina latissima
Algal Res.
26
287-293
2017
Microbulbifer sp. 6532A (E7FLJ9), Pseudoalteromonas elyakovii (Q9Z6D6)
-
Badur, A.H.; Jagtap, S.S.; Yalamanchili, G.; Lee, J.K.; Zhao, H.; Rao, C.V.
Alginate lyases from alginate-degrading Vibrio splendidus 12B01 are endolytic
Appl. Environ. Microbiol.
81
1865-1873
2015
Vibrio splendidus (A3UR40), Vibrio splendidus (A3UR41), Vibrio splendidus 12B01 (A3UR40), Vibrio splendidus 12B01 (A3UR41)
Cheng, Y.; Wang, D.; Gu, J.; Li, J.; Liu, H.; Li, F.; Han, W.
Biochemical characteristics and variable alginate-degrading modes of a novel bifunctional endolytic alginate lyase
Appl. Environ. Microbiol.
83
e01608
2017
Flammeovirga sp. MY04 (A0A1B1FUW4)
Yagi, H.; Fujise, A.; Itabashi, N.; Ohshiro, T.
Purification and characterization of a novel alginate lyase from the marine bacterium Cobetia sp. NAP1 isolated from brown algae
Biosci. Biotechnol. Biochem.
80
2338-2346
2016
Cobetia sp. NAP1
Zhu, B.W.; Huang, L.S.; Tan, H.D.; Qin, Y.Q.; Du, Y.G.; Yin, H.
Characterization of a new endo-type polyM-specific alginate lyase from Pseudomonas sp.
Biotechnol. Lett.
37
409-415
2015
Pseudomonas sp. E03 (A0A0A1DZ36)
Qin, H.M.; Miyakawa, T.; Inoue, A.; Nishiyama, R.; Nakamura, A.; Asano, A.; Ojima, T.; Tanokura, M.
Structural basis for controlling the enzymatic properties of polymannuronate preferred alginate lyase FlAlyA from the PL-7 family
Chem. Commun. (Camb.)
54
555-558
2018
Flavobacterium sp. UMI-01 (A0A068PC91)
Zhu, B.; Ni, F.; Sun, Y.; Yao, Z.
Expression and characterization of a new heat-stable endo-type alginate lyase from deep-sea bacterium Flammeovirga sp. NJ-04
Extremophiles
21
1027-1036
2017
Flammeovirga sp. NJ-04 (A0A1Z2QRE2)
Chen, X.; Dong, S.; Xu, F.; Dong, F.; Li, P.; Zhang, X.; Zhou, B.; Zhang, Y.; Xie, B.
Characterization of a new cold-adapted and salt-activated polysaccharide lyase family 7 alginate lyase from Pseudoalteromonas sp. SM0524
Front. Microbiol.
7
1120
2016
Pseudoalteromonas sp. SM0524 (B2LME8)
Peng, C.; Wang, Q.; Lu, D.; Han, W.; Li, F.
A novel bifunctional endolytic alginate lyase with variable alginate-degrading modes and versatile monosaccharide-producing properties
Front. Microbiol.
9
167
2018
Flammeovirga sp. MY04 (A0A1B1FUS6)
Yu, Z.; Zhu, B.; Wang, W.; Tan, H.; Yin, H.
Characterization of a new oligoalginate lyase from marine bacterium Vibrio sp.
Int. J. Biol. Macromol.
112
937-942
2018
Vibrio sp. W13 (A0A0F7KQI4)
Zhu, B.; Ni, F.; Ning, L.; Sun, Y.; Yao, Z.
Cloning and characterization of a new pH-stable alginate lyase with high salt tolerance from marine Vibrio sp. NJ-04
Int. J. Biol. Macromol.
115
1063-1070
2018
Vibrio sp. NJ-04 (A0A1Z2QRD5)
Zhu, B.; Tan, H.; Qin, Y.; Xu, Q.; Du, Y.; Yin, H.
Characterization of a new endo-type alginate lyase from Vibrio sp. W13
Int. J. Biol. Macromol.
75
330-337
2015
Vibrio sp. W13 (A0A0A1DYR7)
Tavafi, H.; Abdi-Ali, A.; Ghadam, P.; Gharavi, S.
Screening of alginate lyase-producing bacteria and optimization of media compositions for extracellular alginate lyase production
Iran. Biomed. J.
21
48-56
2017
Bacillus sp. TAG8 (A0A0H3WC39)
Yagi, H.; Fujise, A.; Itabashi, N.; Ohshiro, T.
Characterization of a novel endo-type alginate lyase derived from Shewanella sp. YH1
J. Biochem.
163
341-350
2018
Shewanella sp. YH1
Inoue, A.; Anraku, M.; Nakagawa, S.; Ojima, T.
Discovery of a novel alginate lyase from Nitratiruptor sp. SB155-2 thriving at deep-sea hydrothermal vents and identification of the residues responsible for its heat stability
J. Biol. Chem.
291
15551-15563
2016
Nitratiruptor sp. SB155-2 (A6Q1E0)
Qin, H.M.; Miyakawa, T.; Inoue, A.; Nishiyama, R.; Nakamura, A.; Asano, A.; Sawano, Y.; Ojima, T.; Tanokura, M.
Structure and polymannuronate specificity of a eukaryotic member of polysaccharide lyase family 14
J. Biol. Chem.
292
2182-2190
2017
Aplysia kurodai (E7FLQ2)
Zhang, Q.; Li, Y.; Wang, L.
Characterization of an alginate lyase, from abalone and its expression in Escherichia coli
J. Food Sci. Biotechnol.
37
632-638
2018
Haliotis discus discus (A0A0H3W5S4)
-
Zhu, B.; Ning, L.; Jiang, Y.; Ge, L.
Biochemical characterization and degradation pattern of a novel endo-type bifunctional alginate lyase AlyA from marine bacterium Isoptericola halotolerans
Mar. Drugs
16
258
2018
Isoptericola halotolerans (A0A346FH09), Isoptericola halotolerans, Isoptericola halotolerans NJ-05 (A0A346FH09)
Zhu, Y.; Wu, L.; Chen, Y.; Ni, H.; Xiao, A.; Cai, H.
Characterization of an extracellular biofunctional alginate lyase from marine Microbulbifer sp. ALW1 and antioxidant activity of enzymatic hydrolysates
Microbiol. Res.
182
49-58
2016
Microbulbifer sp. ALW1
Pei, X.; Chang, Y.; Shen, J.
Cloning, expression and characterization of an endo-acting bifunctional alginate lyase of marine bacterium Wenyingzhuangia fucanilytica
Protein Expr. Purif.
154
44-51
2019
Wenyingzhuangia fucanilytica (A0A1B1Y7V0)
Manns, D.; Nyffenegger, C.; Saake, B.; Meyer, A.
Impact of different alginate lyases on combined cellulase-lyase saccharification of brown seaweed
RSC Adv.
6
45392-45401
2016
Flavobacterium sp. S20 (G9CHX6), Sphingomonas sp. A1 (Q75WP3)
-
html completed
